Click here to switch to the map view.

The map label for this gene is flhO [H]

Identifier: 167038783

GI number: 167038783

Start: 107259

End: 108014

Strand: Direct

Name: flhO [H]

Synonym: Teth514_0110

Alternate gene names: 167038783

Gene position: 107259-108014 (Clockwise)

Preceding gene: 167038782

Following gene: 167038784

Centisome position: 4.36

GC content: 34.52

Gene sequence:

>756_bases
ATGTTAAGAGGGCTTTATACTGCCTCTTCTGGGATGATTACTCAAACTAAGATAATGGATGTTTTGGCGAATAATCTTGC
AAATGTTAATACAGTAGGATATAAAAGAGATGTGGTAGTTACTTCCTCTTTTCCAAATTTTGAAGTAACAAGACATGGTG
GTGATAATATACCGCCTAACGGAAAAATTGGAAGAATGGATTACGGCGTGTTAGTTGACACTTTTCATACAAATTTTGAA
GAAGGGGCTTTTTCTCAAACCAATGGTAAGTTAGACTTTGCGATAGATGGCAATGGGTTTTTTGTGGTAGATACCCCTAA
TGGTCAGAGGTATACAAGGGATGGTTCTTTTACTTTATCAAAAGATGGGCATTTAGTCACAAAAGAAGGATATATTGTAG
AAGGGGAAAATGGGCCTATACAGTTGTCACAGGGAGACATTTCTGTTGACGAGATGGGTAATATAATAAACAATGGTCAA
TTGGTGGACAGGCTTAGAATTGTGGATTTTGATAATTATGATGGTTTAAGAAAAGAGGGCAATAATTTATTTTTTATAGA
TAACAGTACCAATGTACAAGTTATTCCTGTAACAGGGAAAATAAAGCAAGGTTTTTTAGAACAGTCAAATGTGAATTCAG
TTAAAGAAATGGTAAATATGATAAGCGTGATGAGAAATTATGAATCAAATCAGAAGGTTGTAATTGCTTTTGATGAGACT
CTTGGAAAAGCTGTTAACGAAGTTGGAAAAGTATGA

Upstream 100 bases:

>100_bases
CGCTTTAGGTACAGGAAAAGCATTGGATTCTCTTGAATTATTAGAAAAATCAGAAACTGTAATTGACGTATACAAAATCA
ATAAGTAAGAAGGTGATTTT

Downstream 100 bases:

>100_bases
GGAGGTTGAAAACTTATGATGAGAGCATTGTGGTCTGCGGCATCTGGTATGACTGCTCAGCAACTTAACGTAGATGTTAT
CGCGAATAATCTTGCGAATG

Product: flagellar basal body rod protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MLRGLYTASSGMITQTKIMDVLANNLANVNTVGYKRDVVVTSSFPNFEVTRHGGDNIPPNGKIGRMDYGVLVDTFHTNFE
EGAFSQTNGKLDFAIDGNGFFVVDTPNGQRYTRDGSFTLSKDGHLVTKEGYIVEGENGPIQLSQGDISVDEMGNIINNGQ
LVDRLRIVDFDNYDGLRKEGNNLFFIDNSTNVQVIPVTGKIKQGFLEQSNVNSVKEMVNMISVMRNYESNQKVVIAFDET
LGKAVNEVGKV

Sequences:

>Translated_251_residues
MLRGLYTASSGMITQTKIMDVLANNLANVNTVGYKRDVVVTSSFPNFEVTRHGGDNIPPNGKIGRMDYGVLVDTFHTNFE
EGAFSQTNGKLDFAIDGNGFFVVDTPNGQRYTRDGSFTLSKDGHLVTKEGYIVEGENGPIQLSQGDISVDEMGNIINNGQ
LVDRLRIVDFDNYDGLRKEGNNLFFIDNSTNVQVIPVTGKIKQGFLEQSNVNSVKEMVNMISVMRNYESNQKVVIAFDET
LGKAVNEVGKV
>Mature_251_residues
MLRGLYTASSGMITQTKIMDVLANNLANVNTVGYKRDVVVTSSFPNFEVTRHGGDNIPPNGKIGRMDYGVLVDTFHTNFE
EGAFSQTNGKLDFAIDGNGFFVVDTPNGQRYTRDGSFTLSKDGHLVTKEGYIVEGENGPIQLSQGDISVDEMGNIINNGQ
LVDRLRIVDFDNYDGLRKEGNNLFFIDNSTNVQVIPVTGKIKQGFLEQSNVNSVKEMVNMISVMRNYESNQKVVIAFDET
LGKAVNEVGKV

Specific function: Not required for motility [H]

COG id: COG4786

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787318, Length=263, Percent_Identity=35.7414448669202, Blast_Score=122, Evalue=3e-29,
Organism=Escherichia coli, GI1787317, Length=269, Percent_Identity=29.368029739777, Blast_Score=85, Evalue=4e-18,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 27649; Mature: 27649

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRGLYTASSGMITQTKIMDVLANNLANVNTVGYKRDVVVTSSFPNFEVTRHGGDNIPPN
CCCEEEECCCCCEEHHHHHHHHHHHCCCCEECCEEEEEEEEECCCCEEEEECCCCCCCCC
GKIGRMDYGVLVDTFHTNFEEGAFSQTNGKLDFAIDGNGFFVVDTPNGQRYTRDGSFTLS
CEECCEECCEEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCEEECCCCEEEC
KDGHLVTKEGYIVEGENGPIQLSQGDISVDEMGNIINNGQLVDRLRIVDFDNYDGLRKEG
CCCCEEEECCEEEECCCCCEEEECCCCCHHHHCCHHCCCEEEEEEEEEEECCCCCHHHCC
NNLFFIDNSTNVQVIPVTGKIKQGFLEQSNVNSVKEMVNMISVMRNYESNQKVVIAFDET
CEEEEEECCCCEEEEEECCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEHHH
LGKAVNEVGKV
HHHHHHHHCCC
>Mature Secondary Structure
MLRGLYTASSGMITQTKIMDVLANNLANVNTVGYKRDVVVTSSFPNFEVTRHGGDNIPPN
CCCEEEECCCCCEEHHHHHHHHHHHCCCCEECCEEEEEEEEECCCCEEEEECCCCCCCCC
GKIGRMDYGVLVDTFHTNFEEGAFSQTNGKLDFAIDGNGFFVVDTPNGQRYTRDGSFTLS
CEECCEECCEEEEEECCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCEEECCCCEEEC
KDGHLVTKEGYIVEGENGPIQLSQGDISVDEMGNIINNGQLVDRLRIVDFDNYDGLRKEG
CCCCEEEECCEEEECCCCCEEEECCCCCHHHHCCHHCCCEEEEEEEEEEECCCCCHHHCC
NNLFFIDNSTNVQVIPVTGKIKQGFLEQSNVNSVKEMVNMISVMRNYESNQKVVIAFDET
CEEEEEECCCCEEEEEECCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEHHH
LGKAVNEVGKV
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7836311; 9353933; 9384377 [H]