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The map label for this gene is rpoC

Identifier: 165977164

GI number:

Start: 1922154

End: 1926425

Strand: Direct

Name: rpoC

Synonym: APJL_1763

Alternate gene names: NA

Gene position: NA

Preceding gene: 165977163

Following gene: 165977165

Centisome position: NA

GC content: NA

Gene sequence:

>4272_bases
GTGAAAGACTTAGTAAAGTTTTTAAAAGCACAATCAAAATCGAATGATGATTTTGATGTAATTAAAATTGGTTTAGCATC
ACCGGATAAAATTCGTTCTTGGTCTTTCGGTGAAGTAAAAAAACCGGAAACAATTAACTATCGTACCTTTAAACCTGAGC
GTGACGGTCTTTTCTGTGCACGTATCTTCGGACCGGTAAAAGATTACGAATGTTTATGCGGTAAATATAAACGTTTAAAA
CACCGCGGCGTAATCTGCGAAAAATGTGGTGTTGAAGTTACTCAAACTAAAGTACGTCGTGACCGTATGGGTCATATCGA
ACTTGCTTGTCCGGTGGCACACATTTGGTTCTTAAAATCACTTCCGTCCCGTATCGGTTTAATTTTAGATATGCCGTTAC
GCGATATTGAACGTGTACTTTACTTCGAATCTTATGTGGTTACCGAACCGGGAATGACCGATTTAGAAAAAAATCAGTTA
TTAACCGAAGAACAGTTCTTAGACGCAGAAGAGCGTTGGGGCGATGAGTTTGAAGCGAAAATGGGTGCGGAAGGTATTCA
AGCACTTTTACGCGATATGGACTTAGAGCACCAATGTGAAATGATGCGTGAAGAGTTACAAGAAACGAACTCTGAAACAA
AACGTAAGAAAATCACAAAACGCTTAAAATTATTAGAAGCATTCCAACAATCCGGTAACAAACCGGAGTGGATGGTAATG
ACCGTATTACCGGTACTTCCGCCGGATCTTCGTCCGTTAGTACCACTTGACGGCGGTCGTTTTGCGACTTCGGATCTGAA
CGATTTATATCGTCGTGTGATCAACCGTAACAACCGTTTAAAACGCTTATTAGATTTAGTAGCGCCGGATATCATTGTAC
GTAATGAAAAACGTATGTTACAAAAGTCTGTTGATGCGTTATTAGATAACGGTCGTCGTGGTCGTGCGATTACAGGTTCT
AACAAACGTCCGTTAAAATCTCTTGCAGATATGATCAAGGGTAAACAAGGTCGTTTCCGTCAGAACTTATTAGGTAAACG
TGTGGACTATTCAGGTCGTTCGGTAATCACCGTAGGTCCTTACTTACACCTACACCAATGCGGTTTACCGAAAAAAATGG
CATTGGAATTATTCCGTCCGTTTATTTACTCTAAATTAGAATCTCGCGGCATTGCTTCAACAATCAAAGCTGCGAAGAAA
ATGGTTGAACGTGAAGAACCGATCGTATGGGATATCCTTGCGGAAGTGATTCGTGAACACCCAATTTTATTAAACCGTGC
GCCGACACTTCACCGTTTAGGTATTCAAGCGTTTGAGCCAATCTTAATCGAAGGTAAAGCAATCCAGTTACACCCGCTTG
TTTGTGCGGCGTTCAATGCGGACTTCGATGGTGACCAAATGGCGGTACACGTACCATTAACACTTGAAGCTCAGTTAGAA
GCTCGTGCGTTAATGATGTCAACTAACAATGTACTTTCACCGGCAAGTGGTGACCCGATTATCGTACCTTCTCAGGACGT
TGTATTAGGTCTTTACTATATGACGCGTGAGAAAGTGAATGCGAAAGGTGAAGGAATGTATTTCCTTGACCCACGTGAAG
CGGAAAAAGCATACCGTACCGGTCAAGCTGAATTACACGCTCGCGTAAAAGTTCGTATTACCGAACACGTGAAAAACGAA
GCGGGCGAATTAGTTGCGGAAACTAAGTTGTTAGATACTACTATCGGTCGTGCAATCTTATGGATGATCGCACCGAAAGG
TATGCCGTTTAAAGTATTCAACCAAACGTTAGGTAAAAAAGCGATTTCAAAATTAATCAACGAATCGTACCGTCGTTTAG
GTTTAAAAGAATCGGTAATCCTTGCCGACCAAATTATGTATACCGGTTTCGCGTACGCTGCTCGTTCAGGTGCGTCAGTC
GGTATCGATGATATGGTGATTCCGGCACAAAAACACGAAATTATTCGTGCGGCGGAAGCAGAAGTGGCAGAGATTCAAGA
ACAATTTAACTCAGGTCTTGTAACTGCGGGCGAACGTTATAACAAAGTAATCGATATTTGGGCGGCTGCAAACGAACGTG
TTGCAAAAGCAATGATGGAAAACCTTTCAACGGAAGAAGTCATCAACCGTGAAGGTAATCCGGAAAAACAAGCGTCATTC
AACAGTATCTTTATGATGGCTGACTCGGGTGCGCGTGGTTCTGCAGCTCAGATTCGTCAGTTAGCGGGCATGCGTGGTCT
TATGGCTCGTCCGGACGGCTCGATCATCGAAACCCCAATTACCGCAAACTTCCGTGAAGGTCTGAACGTTCTTCAGTACT
TTATTTCAACCCACGGTGCGCGTAAAGGTCTTGCGGATACCGCATTAAAAACAGCGAACTCAGGTTACTTAACACGTCGT
TTAGTAGATGTAGCACAAGACTTAGTAATCACTGAAGACGACTGTGGTACACACGAAGGTATCGTGATGACTCCGTTAAT
CGAAGGTGGTGACGTTAAAGAAGCATTACGTGATCGCGTATTAGGTCGTGTGGTGGCAGAAGACGTATTAAAACCGGGTA
CGGAAGAAGTATTAATTCCACGTAACACCTTAATCGATGAGAAATGGTGTGATGTGATTGATGCGGAATCTGTGGACGTA
ATCAAAGTACGTTCGGTGGTAACTTGTAACACAGACTTCGGTGTGTGTGCGAAATGTTACGGTCGTGACCTTGCTCGCGG
TCACCTTATCAATCAAGGTGAAGCAGTGGGTGTTATCGCGGCGCAATCAATCGGTGAACCGGGTACACAGCTAACCATGC
GTACGTTCCACATCGGTGGTGCGGCTTCTGCGGCAGCAAAAGAATCTAGCATCCAAGTGAAAAACGCAGGTACGATTAAA
TTAACTAACGCTAAATTTGTAACTAACAAAGAAGGCAAAATCGTATTAACTTCACGTAACACTGAATTAACTGTAATCGA
CACATTCGGTCGTACCAAAGAAAACTATAAAGTACCTTACGGTGCGGTGCTTTCTAAAAACGACGGTGCAGAAGTTGCAG
TAGGTGAAGTAGTTGCTAACTGGGATCCGCATACAATGCCGGTCATCTCAGAGGTAAGCGGTCGCATCCAATTCAGCGAC
ATCGTAGATGGCTTAACCGTTACTCGTCAAACTGACGAATTAACCGGTTTATCCTCTATCGTGGTGCAAGATGTGGGTGA
ACGTGCAACAGCAGGTAAAGATTTACGTCCGGCATTACGTTTAGTTGATGCACAAGGTAACGATATTTTAATCCCTGGTA
CAGACGTTGCGGCACAATACTTCTTACCGGGTAAAGCAATCGTAACTTTAGATGACGGTGCAGAAATCGAAGTCGGTGAA
GCATTAGCACGTATTCCACAAGAATCTGTGGGTACGAAAGATATTACCGGTGGTCTTCCACGCGTAGCAGACTTATTCGA
AGCACGTAAACCGAAAGAGCCGGCAATCCTTGCTGAAATTTCAGGTATCGTGTCATTCGGTAAAGAAACTAAAGGTAAAC
GTCGTTTAGTGATCACGCCGGCAGAAGGCGAAGCATTCGAAGAAATGATTCCAAAATGGCGTCAGCTCAACGTGTTCGAG
GGCGAGATGGTACAACGTGGTGACGTAATCTCTGATGGTGCGGAAACGCCGCACGACATCTTACGTTTACGTGGCGTTCA
TGCTGTAACAGACTACATCGTAAACGAAGTACAAGAAGTTTACCGCTTACAAGGGGTAAAAATTAACGATAAACACATCG
AAGTTATCGTTCGCCAAATGTTACGTAAAGCGGTTATCACTAACGCATACGACAGCGAATTCCTCGAAGGGGAACAAGTT
GAAGTTTCACGTGTGAAAATTGCTAACCGTAAACGTGCAGAAGAAGGCAAACCACTTGTTGAGTTCGAACGTGAATTACT
TGGTATTACCAAAGCGTCGCTTGCAACTGAGTCATTTATCTCAGCAGCGTCGTTCCAAGAAACCACACGTGTGCTTACCG
AAGCGGCAGTGGCAGGTAAACGTGACGAATTACGCGGCTTGAAAGAGAACGTAATCGTAGGTCGTTTAATCCCGGCGGGT
ACAGGTTTCGCATATCACCAAGCACGTGCGAAAAAACGTAGCCAGCCAGAACAAGCGGTCGCTTTTGAAGCGCCGGTTGC
AAAAGCTAACGGATTCGCAACCGATGCTGATATCGAAGCGGAATTCGAATTCGTTGCAGACGATGCAACTCAAAGCCTAG
CAGCGTTATTAAACGCAGGTGATGAAGAGTAA

Upstream 100 bases:

>100_bases
TGGTAAAAATTTTGCAAAATTTGACCGCTTGTAAAATAGATTTCCTCGTTTAGAGCCTTGTGTTCTAAGCAAAACTTTAA
TTCCTCACTAGGGGCAAAAA

Downstream 100 bases:

>100_bases
TTCGTAGTATCGATAGATAGAAAAAAGTAAAGCCCCCAGAGCGAAAGTTCTGGGGGCTTTTTTAGGGATAAATTGGATTT
TAGAGCTAATCAAGTATATA

Product: DNA-directed RNA polymerase subunit beta'

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1423_residues
MKDLVKFLKAQSKSNDDFDVIKIGLASPDKIRSWSFGEVKKPETINYRTFKPERDGLFCARIFGPVKDYECLCGKYKRLK
HRGVICEKCGVEVTQTKVRRDRMGHIELACPVAHIWFLKSLPSRIGLILDMPLRDIERVLYFESYVVTEPGMTDLEKNQL
LTEEQFLDAEERWGDEFEAKMGAEGIQALLRDMDLEHQCEMMREELQETNSETKRKKITKRLKLLEAFQQSGNKPEWMVM
TVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLVAPDIIVRNEKRMLQKSVDALLDNGRRGRAITGS
NKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPYLHLHQCGLPKKMALELFRPFIYSKLESRGIASTIKAAKK
MVEREEPIVWDILAEVIREHPILLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLTLEAQLE
ARALMMSTNNVLSPASGDPIIVPSQDVVLGLYYMTREKVNAKGEGMYFLDPREAEKAYRTGQAELHARVKVRITEHVKNE
AGELVAETKLLDTTIGRAILWMIAPKGMPFKVFNQTLGKKAISKLINESYRRLGLKESVILADQIMYTGFAYAARSGASV
GIDDMVIPAQKHEIIRAAEAEVAEIQEQFNSGLVTAGERYNKVIDIWAAANERVAKAMMENLSTEEVINREGNPEKQASF
NSIFMMADSGARGSAAQIRQLAGMRGLMARPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRR
LVDVAQDLVITEDDCGTHEGIVMTPLIEGGDVKEALRDRVLGRVVAEDVLKPGTEEVLIPRNTLIDEKWCDVIDAESVDV
IKVRSVVTCNTDFGVCAKCYGRDLARGHLINQGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASAAAKESSIQVKNAGTIK
LTNAKFVTNKEGKIVLTSRNTELTVIDTFGRTKENYKVPYGAVLSKNDGAEVAVGEVVANWDPHTMPVISEVSGRIQFSD
IVDGLTVTRQTDELTGLSSIVVQDVGERATAGKDLRPALRLVDAQGNDILIPGTDVAAQYFLPGKAIVTLDDGAEIEVGE
ALARIPQESVGTKDITGGLPRVADLFEARKPKEPAILAEISGIVSFGKETKGKRRLVITPAEGEAFEEMIPKWRQLNVFE
GEMVQRGDVISDGAETPHDILRLRGVHAVTDYIVNEVQEVYRLQGVKINDKHIEVIVRQMLRKAVITNAYDSEFLEGEQV
EVSRVKIANRKRAEEGKPLVEFERELLGITKASLATESFISAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAG
TGFAYHQARAKKRSQPEQAVAFEAPVAKANGFATDADIEAEFEFVADDATQSLAALLNAGDEE

Sequences:
NA

Specific function: NA

COG id: COG0086

COG function: function code K; DNA-directed RNA polymerase, beta' subunit/160 kD subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA