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The map label for this gene is rpoD

Identifier: 165976903

GI number:

Start: 1649248

End: 1651107

Strand: Direct

Name: rpoD

Synonym: APJL_1500

Alternate gene names: NA

Gene position: NA

Preceding gene: 165976902

Following gene: 165976910

Centisome position: NA

GC content: NA

Gene sequence:

>1860_bases
ATGGAACAACAATTAGAACAGCAATCTCAATTAGAACTTCTGATTGCCCAAGGGCGTGAACAAGGTTATTTAACCATTTC
GGAAGTGCACGACCACTTACCGGAAGAGTTGGTTGATGCGGAGCAGATCGAAGATATTATTCAAATGATCAACGATATGG
GGATTAAAGTTTTAGAAACCGCCCCGGATACCGACGAGTTAATGCTCGCGGAAAATATCGCTGATGAAGATGTCGTGGAA
GAAGCGACTAAAGTGCTTTCGACGGTAGAATCTGAATTAGGTAGAACAACCGATCCGGTACGTATGTATATGCGTGAAAT
GGGTACGGTGGAATTGCTTACCCGTGAAGGCGAAATTGATATTGCGAAACGTATTGAAGAAGGTATCAATGAAGTGCAAT
GTGCGGTTGCAGAATATCCGGAAGCCTTAACCGAATTAATCGGTTTCTATGCGCAAGTTGAAGAAGGTACGATGCGTTTA
TCGGATCTTGTTACCGCTTTCGTTGATCCGAATATCCAAGCGGACGAAGCGTTGGAAGATTTGGACGTAGATCTTGATGA
CGAAGAAGAAGCGGAAGATGTTGCGGATGTAGATGACGAGAGCGAAGAGGAAGAAAGCGACGGCAATGCGGATACCGGTG
ATGACAATTCAATCGATCCTGAACTTGCTCGCGAAAAATTCTATGCGTTACGCGAGCAACACGAAAAAGCCTTACAAGCG
ATTCAAAAACACGGTCGTAGCCATAAAAAATCAAGAGAGCAGATCCAAGCACTTTCGGATATTTTCCGTGAGTTCCGTTT
AGTACCGAAACAATTTGATTTACTTGTCGAATCGATGCAAAAAATGATGAAACAAGTACGTTCGGAAGAGCGCCAAATTC
AACGTTATGCGGTTGAATATGCACAAATGAAAAAGGCTGACTTCTTAAAATTGTTCCAAGGTAACGAAACGTCGGAAGAA
TGGATTGAAAAAGCAATTAATGCGAAAAAAGGCGCCGCGCCTAAATTGGCGAACTATATCGACCAAATTCGCGTAAATAT
CGATAATTTACAACGTATGGAGCAAACGACCGGTCTGACTATCGCACAAATTCGTGAAATCGGCGGGCGTATCGCAAACG
GTGAATTAAAAGCTCGCCGTGCGAAAAAAGAGATGGTGGAAGCGAACTTACGTTTAGTAATCTCAATTGCGAAAAAATAT
ACCAACCGCGGTTTGCAATTCCTAGATTTAATTCAGGAAGGTAACATCGGTTTGATGAAAGCGGTCGATAAATTCGAATA
TCGTCGCGGTTATAAGTTCTCTACTTATGCGACTTGGTGGATTCGTCAGGCGATTACCCGTTCAATCGCCGACCAAGCAC
GTACCATCCGTATTCCGGTACATATGATCGAAACCATCAATAAACTGAACCGTATTTCTCGTCAATGTTTACAAGAAATG
GGACGTGAAGCGACGCCGGAAGAGTTAGCGGAACGTATGGGAATGCCGGAAGATAAGATTCGTAAAGTATTGAAGATTGC
CAAAGAGCCGATTTCAATGGAAACGCCGATTGGCGATGACGACGATTCGCATTTAGGTGATTTCATTCAAGACGAAAGCC
TTGAATTACCGTTAGATTCGGCAACTGCAGAAAGTTTACGTTTAGCAACGAATGAAGTATTGGAAGGCTTAACGCCGCGT
GAAGCAAAAGTATTGCGTATGCGTTTCGGTATTGATATGAACACAGACCACACGCTTGAGGAAGTCGGTAAGCAGTTTGA
CGTAACGCGTGAACGTATTCGTCAGATTGAAGCGAAAGCGTTACGCAAACTTCGTCACCCAAGCCGTTCGGAAACTTTAC
GTAGTTTCTTAGACGACTAG

Upstream 100 bases:

>100_bases
GCGGTCATTTTTGAGAAATTTTTTGCAAAACTATCAAGAAAATTTTAATTAATGGTATAATCCAATACTATTTTTGCGCG
CACACAAAACGGATACAATT

Downstream 100 bases:

>100_bases
AATAGAGAAATAAAAATGCCCAGGCGAGTTAAACTTGGGCATTTTTATTTCTATGACAAGCGGTCGAATTTGCAAAAAAA
TTAACAAATTTAACCGCTTG

Product: RNA polymerase sigma factor RpoD

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>619_residues
MEQQLEQQSQLELLIAQGREQGYLTISEVHDHLPEELVDAEQIEDIIQMINDMGIKVLETAPDTDELMLAENIADEDVVE
EATKVLSTVESELGRTTDPVRMYMREMGTVELLTREGEIDIAKRIEEGINEVQCAVAEYPEALTELIGFYAQVEEGTMRL
SDLVTAFVDPNIQADEALEDLDVDLDDEEEAEDVADVDDESEEEESDGNADTGDDNSIDPELAREKFYALREQHEKALQA
IQKHGRSHKKSREQIQALSDIFREFRLVPKQFDLLVESMQKMMKQVRSEERQIQRYAVEYAQMKKADFLKLFQGNETSEE
WIEKAINAKKGAAPKLANYIDQIRVNIDNLQRMEQTTGLTIAQIREIGGRIANGELKARRAKKEMVEANLRLVISIAKKY
TNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKLNRISRQCLQEM
GREATPEELAERMGMPEDKIRKVLKIAKEPISMETPIGDDDDSHLGDFIQDESLELPLDSATAESLRLATNEVLEGLTPR
EAKVLRMRFGIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSETLRSFLDD

Sequences:
NA

Specific function: NA

COG id: COG0568

COG function: function code K; DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA