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The map label for this gene is ytfT [H]

Identifier: 162420879

GI number: 162420879

Start: 497109

End: 498128

Strand: Direct

Name: ytfT [H]

Synonym: YpAngola_A0477

Alternate gene names: 162420879

Gene position: 497109-498128 (Clockwise)

Preceding gene: 162419105

Following gene: 162421718

Centisome position: 11.04

GC content: 48.82

Gene sequence:

>1020_bases
ATGGGAAACAGGAGCCTGTCAATGACACAACGACCGCGCAAAGTAAAATGGGTTTTGCCGAAAGGCGCGACACAATTTGG
TGCACTGGCAGTTATTTTATTGATTGATAGTCTGGTCGCACCGCATTTCTTCTCTATCCATATTCAGGATGGCCGGCTGT
TTGGCAGTATTATTGATATTTTAAACCGCGGCGCCCCCGTTGCTTTATTGGCGCTGGGAATGACATTAGTCATTGCGACG
GGTGGCATTGATTTATCGGTCGGTGCGGTCATGGCTATCGCTGGAGCGACTGCCGCGACGTTGACCAGTGCGGGATACCC
GTTCATGACGGTGCTAGCGCTGTCACTCGCTGTCGGGGCGCTATGTGGTTTGTGGAATGGTTTCTTAGTGGCGGTATTAC
AAATCCAGCCAATAGTTGCCACGCTAATGTTGATGGTCGCCGGGCGCGGAATCGCTCAGCTTATTACTGAAGGCCAGATT
GTTACTTTTGATAGTGGCGGTTTGGCAACGCTTGGTAGCAGTACGCTGATGTATTTACCCATGTCAGTGGTTATTGCATG
TAGCATGTTAATTCTGGTGTGGTTGCTAACCCGTAAAACGGCGCTTGGGTTGTTCATTGAGTCAGTCGGTATCAACTTAC
GATCTGCTCGGAATGCAGGTGTGAGTACCCGTTTAGTGCTGATTGCCGTTTATGTGATTTGCGGTGTGTGCGCTGCGGTG
GCGGGTATTATTGTGACCGCTGATATTCGTGGTGCTGATGCGAACAATGCGGGCTTATGGCTGGAGTTGGACGCGATATT
GGCGGTAGTTATCGGTGGTGCATCGTTGATGGGCGGACGTTTTAATCTACTACTTTCCGTTATTGGCGCTTTAATTATTC
AGGGTATGAATACTGGGATTTTACTTTCTGGTTATCAGCCGGAGTTTAATTTGGTGCTTAAAGCCATTGTTGTGCTGGCC
GTATTAGTTGTGCAATCCCCGATGATCTCATTAAGCCATCTCTTCCAGAGGCGAAAATAA

Upstream 100 bases:

>100_bases
TCGTTCTTCGTGATCGTCGGCATGTTGCTCAACTCGACCACGATGAAATTTCCGTTCCTGCCATTATGCAGGCGATCGCG
GTGCAATAAGGAGTGGTTTC

Downstream 100 bases:

>100_bases
TGTTAAAGCGTAATGTTCCCTTGCTGATTACTATCGCCGTTTTTATTCTGGGATATGCTTTCTGTCTGAGTCAATTTCCC
AGTTTCTCCTCCTCTCGAGT

Product: putative sugar ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 338

Protein sequence:

>339_residues
MGNRSLSMTQRPRKVKWVLPKGATQFGALAVILLIDSLVAPHFFSIHIQDGRLFGSIIDILNRGAPVALLALGMTLVIAT
GGIDLSVGAVMAIAGATAATLTSAGYPFMTVLALSLAVGALCGLWNGFLVAVLQIQPIVATLMLMVAGRGIAQLITEGQI
VTFDSGGLATLGSSTLMYLPMSVVIACSMLILVWLLTRKTALGLFIESVGINLRSARNAGVSTRLVLIAVYVICGVCAAV
AGIIVTADIRGADANNAGLWLELDAILAVVIGGASLMGGRFNLLLSVIGALIIQGMNTGILLSGYQPEFNLVLKAIVVLA
VLVVQSPMISLSHLFQRRK

Sequences:

>Translated_339_residues
MGNRSLSMTQRPRKVKWVLPKGATQFGALAVILLIDSLVAPHFFSIHIQDGRLFGSIIDILNRGAPVALLALGMTLVIAT
GGIDLSVGAVMAIAGATAATLTSAGYPFMTVLALSLAVGALCGLWNGFLVAVLQIQPIVATLMLMVAGRGIAQLITEGQI
VTFDSGGLATLGSSTLMYLPMSVVIACSMLILVWLLTRKTALGLFIESVGINLRSARNAGVSTRLVLIAVYVICGVCAAV
AGIIVTADIRGADANNAGLWLELDAILAVVIGGASLMGGRFNLLLSVIGALIIQGMNTGILLSGYQPEFNLVLKAIVVLA
VLVVQSPMISLSHLFQRRK
>Mature_338_residues
GNRSLSMTQRPRKVKWVLPKGATQFGALAVILLIDSLVAPHFFSIHIQDGRLFGSIIDILNRGAPVALLALGMTLVIATG
GIDLSVGAVMAIAGATAATLTSAGYPFMTVLALSLAVGALCGLWNGFLVAVLQIQPIVATLMLMVAGRGIAQLITEGQIV
TFDSGGLATLGSSTLMYLPMSVVIACSMLILVWLLTRKTALGLFIESVGINLRSARNAGVSTRLVLIAVYVICGVCAAVA
GIIVTADIRGADANNAGLWLELDAILAVVIGGASLMGGRFNLLLSVIGALIIQGMNTGILLSGYQPEFNLVLKAIVVLAV
LVVQSPMISLSHLFQRRK

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693214, Length=327, Percent_Identity=70.3363914373089, Blast_Score=381, Evalue=1e-107,
Organism=Escherichia coli, GI1790191, Length=304, Percent_Identity=35.1973684210526, Blast_Score=135, Evalue=3e-33,
Organism=Escherichia coli, GI1790524, Length=318, Percent_Identity=30.188679245283, Blast_Score=115, Evalue=4e-27,
Organism=Escherichia coli, GI1788896, Length=327, Percent_Identity=32.4159021406728, Blast_Score=112, Evalue=5e-26,
Organism=Escherichia coli, GI1788471, Length=276, Percent_Identity=34.4202898550725, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI145693152, Length=257, Percent_Identity=32.295719844358, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1787793, Length=276, Percent_Identity=34.4202898550725, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI87082395, Length=252, Percent_Identity=33.7301587301587, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1789992, Length=128, Percent_Identity=36.71875, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1787794, Length=272, Percent_Identity=27.9411764705882, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 35287; Mature: 35156

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGNRSLSMTQRPRKVKWVLPKGATQFGALAVILLIDSLVAPHFFSIHIQDGRLFGSIIDI
CCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHH
LNRGAPVALLALGMTLVIATGGIDLSVGAVMAIAGATAATLTSAGYPFMTVLALSLAVGA
HCCCCCHHHHHHHHHHHEEECCCCHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHH
LCGLWNGFLVAVLQIQPIVATLMLMVAGRGIAQLITEGQIVTFDSGGLATLGSSTLMYLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEECCCCCCHHCCCHHHHHH
MSVVIACSMLILVWLLTRKTALGLFIESVGINLRSARNAGVSTRLVLIAVYVICGVCAAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHH
AGIIVTADIRGADANNAGLWLELDAILAVVIGGASLMGGRFNLLLSVIGALIIQGMNTGI
HHHEEEEECCCCCCCCCCEEEEHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHCCCCCCE
LLSGYQPEFNLVLKAIVVLAVLVVQSPMISLSHLFQRRK
EEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC
>Mature Secondary Structure 
GNRSLSMTQRPRKVKWVLPKGATQFGALAVILLIDSLVAPHFFSIHIQDGRLFGSIIDI
CCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHH
LNRGAPVALLALGMTLVIATGGIDLSVGAVMAIAGATAATLTSAGYPFMTVLALSLAVGA
HCCCCCHHHHHHHHHHHEEECCCCHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHH
LCGLWNGFLVAVLQIQPIVATLMLMVAGRGIAQLITEGQIVTFDSGGLATLGSSTLMYLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEECCCCCCHHCCCHHHHHH
MSVVIACSMLILVWLLTRKTALGLFIESVGINLRSARNAGVSTRLVLIAVYVICGVCAAV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHH
AGIIVTADIRGADANNAGLWLELDAILAVVIGGASLMGGRFNLLLSVIGALIIQGMNTGI
HHHEEEEECCCCCCCCCCEEEEHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHCCCCCCE
LLSGYQPEFNLVLKAIVVLAVLVVQSPMISLSHLFQRRK
EEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]