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The map label for this gene is yfcN [C]

Identifier: 162419632

GI number: 162419632

Start: 393318

End: 393848

Strand: Direct

Name: yfcN [C]

Synonym: YpAngola_A0379

Alternate gene names: 162419632

Gene position: 393318-393848 (Clockwise)

Preceding gene: 162418879

Following gene: 162418568

Centisome position: 8.73

GC content: 45.57

Gene sequence:

>531_bases
ATGAAAAAGAAATATCACCTGACACCAGATGAGTTACAGCTATTTAAAGAATCGATAGCGGGTGCTAAAAAACTCAGACA
AGACACAATCGTCCACCATACACCGCCGAAGTTAGGCAAAAAAATTGCACCAGAACGCTTGCTGCAAGAGCAGGTGGATG
CCAGTTATTATTTTTCTGATGAATTCCAACCGCTGTTAGATACTGATGGACCGACACGCTATGTTCGGCCTGGTGTCGAT
AACTTTGAAGTTAAGAAACTGCGTCGTGGTGATTACTCGCCAGAAATGTTTTTGGATCTACACGGTTTAACCCAGAAGCA
GGCTAAACAAGAACTGGGGGCGTTAATTGCGGCTTGCAAGCGCGAACATGTGCATTGCGCGTGTGTTATGCATGGTCACG
GCAAACATGTTTTGAAGCAACAGACGCCGCTCTGGATGGCACAACACCCTGATGTTTTGGCATTCCATCAAGCCCCTAAA
GAGTGGGGTGGAACCGCAGCATTGCTGTTATTGATTGAATTAGAAGAGTAA

Upstream 100 bases:

>100_bases
GGCATAAACAACTAAAAGTATGACGAATATCGACATTTATTTCGACAGATGGTTTGCAGCAGGTAAACTGGGCGCAATTG
AATTAGGTATAGAACAGACG

Downstream 100 bases:

>100_bases
CGGTGCTGGCAGTTATGTTGTCAGCCAATAGCGCTGCATCAGTAGTCAATAAGCGGGTGTTCTTATGTCATCCGCCAACA
AACTTGTTTCGCCAAAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MKKKYHLTPDELQLFKESIAGAKKLRQDTIVHHTPPKLGKKIAPERLLQEQVDASYYFSDEFQPLLDTDGPTRYVRPGVD
NFEVKKLRRGDYSPEMFLDLHGLTQKQAKQELGALIAACKREHVHCACVMHGHGKHVLKQQTPLWMAQHPDVLAFHQAPK
EWGGTAALLLLIELEE

Sequences:

>Translated_176_residues
MKKKYHLTPDELQLFKESIAGAKKLRQDTIVHHTPPKLGKKIAPERLLQEQVDASYYFSDEFQPLLDTDGPTRYVRPGVD
NFEVKKLRRGDYSPEMFLDLHGLTQKQAKQELGALIAACKREHVHCACVMHGHGKHVLKQQTPLWMAQHPDVLAFHQAPK
EWGGTAALLLLIELEE
>Mature_176_residues
MKKKYHLTPDELQLFKESIAGAKKLRQDTIVHHTPPKLGKKIAPERLLQEQVDASYYFSDEFQPLLDTDGPTRYVRPGVD
NFEVKKLRRGDYSPEMFLDLHGLTQKQAKQELGALIAACKREHVHCACVMHGHGKHVLKQQTPLWMAQHPDVLAFHQAPK
EWGGTAALLLLIELEE

Specific function: Unknown

COG id: COG2840

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Smr domain [H]

Homologues:

Organism=Escherichia coli, GI1788671, Length=176, Percent_Identity=71.0227272727273, Blast_Score=264, Evalue=3e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002625
- InterPro:   IPR022990 [H]

Pfam domain/function: PF01713 Smr [H]

EC number: NA

Molecular weight: Translated: 20094; Mature: 20094

Theoretical pI: Translated: 8.14; Mature: 8.14

Prosite motif: PS50828 SMR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKYHLTPDELQLFKESIAGAKKLRQDTIVHHTPPKLGKKIAPERLLQEQVDASYYFSD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHCCCEEECC
EFQPLLDTDGPTRYVRPGVDNFEVKKLRRGDYSPEMFLDLHGLTQKQAKQELGALIAACK
CCCCCCCCCCCCCEECCCCCCHHHHHHHCCCCCCHHEEECCCCCHHHHHHHHHHHHHHHH
REHVHCACVMHGHGKHVLKQQTPLWMAQHPDVLAFHQAPKEWGGTAALLLLIELEE
HCCCEEEEEEECCCCHHHHHCCCEEECCCCCEEEECCCCHHHCCCEEEEEEEEECC
>Mature Secondary Structure
MKKKYHLTPDELQLFKESIAGAKKLRQDTIVHHTPPKLGKKIAPERLLQEQVDASYYFSD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHCCCEEECC
EFQPLLDTDGPTRYVRPGVDNFEVKKLRRGDYSPEMFLDLHGLTQKQAKQELGALIAACK
CCCCCCCCCCCCCEECCCCCCHHHHHHHCCCCCCHHEEECCCCCHHHHHHHHHHHHHHHH
REHVHCACVMHGHGKHVLKQQTPLWMAQHPDVLAFHQAPKEWGGTAALLLLIELEE
HCCCEEEEEEECCCCHHHHHCCCEEECCCCCEEEECCCCHHHCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA