| Definition | Yersinia pestis Angola, complete genome. |
|---|---|
| Accession | NC_010159 |
| Length | 4,504,254 |
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The map label for this gene is nagE [H]
Identifier: 162419497
GI number: 162419497
Start: 353355
End: 355388
Strand: Direct
Name: nagE [H]
Synonym: YpAngola_A0339
Alternate gene names: 162419497
Gene position: 353355-355388 (Clockwise)
Preceding gene: 162419896
Following gene: 162419840
Centisome position: 7.84
GC content: 49.41
Gene sequence:
>2034_bases ATGAGTATTCTTGGTTACTTACAAAAAGTAGGTCGAGCGTTGATGGTCCCTGTGGCCACACTGCCTGCGGCCGCGATATT GATGGGTGTAGGCTACTGGATAGACCCAGTCGGTTGGGGGGCTGATAATGCACTGGCGGCATTATTCATCAAATCTGGTG CTGCAATAATCGAAAACATGTCGGTACTGTTCGCAATTGGTGTTGCTTACGGTATGTCAAAAGATAAAGACGGTGCTGCG GCACTGACCGGTTTTGTCGGTTTCCTGGTATTAACCACGCTGTGTTCGCCAGCAGCGGTTTCGATGATCAAACAGATTCC ACTTGATCAAGTCCCTGCCGCATTTGGCAAAATCGAAAACCAGTTCGTGGGTATTTTGGTCGGTATTATCTCTGCTGAGC TTTATAACCGTTTCAGCGGCGTTGAACTGCCAAAAGCGCTCTCTTTCTTCAGTGGTCGTCGTTTGGTTCCAATCTTGACG TCCTTCCTGATGATCGCAGTGGCCTTTATGCTGATGTACATATGGCCACTGATTTATAACGCATTAGTGACCTTCGGTGA ATACATCAAAGATCTGGGTTCTGTTGGTGCGGGTATCTATGCTTTCTTCAACCGCTTACTGATCCCTGTTGGTCTGCATC ACGCTCTGAACTCGGTGTTCTGGTTTGACGTCGCTGGGATTAACGATATTCCTAACTTCCTCGGCGGCCAAGAATCGATC AATAAAGGCACCGGCATTGTCGGTATCACTGGCCGTTATCAGGCAGGTTTCTTCCCGATTATGATGTTTGGTTTACCGGG TGCTGCGTTGGCAATTTACCACTGCGCACGTCCAGAAAATAAAGCAAAAGTGGCGGGTATCATGATGGCGGGGGCATTTG CAGCCTTCTTCACAGGTATCACTGAGCCTCTTGAATTCTCCTTCATGTTTGTGGCACCTGTGCTGTACTTCTTGCACGCC GTGTTGACCGGTATTTCCGTATTCATCGCCGCCAGCATGCATTGGATCGCGGGCTTTGGTTTCAGTGCCGGTTTAGTGGA TATGGTGCTCTCTTCCCGTAACCCGTTGGCTACGCAATGGTACATGCTGATCCCACAAGGTCTGATATTCTTTGTGATTT ACTACTTAGTATTCCGTTTCACTATCCAGAAATTCAACTTATTGACACCTGGCCGTGAGCTGGCGGTGGAAGGCAGTGAA GAAGATGGTTACGACGTAAATGTTGATAAAACGCCAGCAGTGAATGAAAGTGAAATCAATAGCCTTGCTCGTCGCTATAT TGGTGCCATCGGTGGTTCAGACAACCTGACGGCCATTGATGCCTGCATTACCCGCCTACGCCTGAATGTTAAAGATTCAG CCTTGGTTAATGACAGTGTAGCCAAACGCTTAGGGGCCTCTGGTGTTATTCGTCTGAATAAGCAAAGTGTACAAATTATC GTTGGTACTCGCGCAGAACTGATTGCCGCAGCAATGCGCACGGTGCTGGCGGGTGGCCCAATCCCCGCGGCAAGCAGCAA TGCTGCGCCTACGGGTGCAAGACCGCAGGCGGTCATTAACACCGCGAAAACGGCTTCTTTAGTTCTGGTTTCGCCAATTA CCGGTGATGTTGTGCCATTGGCGCAGGTTCCTGATGAGGCTTTTGCTAGCAAAGCGGTAGGTGAGGGGGTTGCTATCCGT CCTACAGACAAAATAGTTGTTTCTCCCGCTAGCGGCACTATTGTGAAAATCTTCAATACGGATCATGCGTTCTGCCTGGA AACGGAAACCGGTGCTGAGATTGTGGTTCATATCGGGATTGATACCGTGAAGCTTAACGGCCAGGGCTTTACCCGTTTAG TTGAAGAGGGGACGACAGTGGTTGCTGGTCAGCCGGTGTTAGAACTGGATCTGGCTTATCTGAATGCCAACGCGCATTCA ATGATCAGCCCAGTTGTCGTCAGTAATATTGATGACTACGCGGGGATCTCGCTGTTGGCGAGCGGTTCAGTCGTTGCCGG TCAAAGCCAATTATTTGAGATTCGTGGCAAATAA
Upstream 100 bases:
>100_bases ATGTGTTTATATAATGTGTGCCATGTACTTTTCTAAAAGGTAGTGAGCGTTTCAAATAAACTACTTATAAGGGTCCGATA TCGGACGAACAGGGGGAAAG
Downstream 100 bases:
>100_bases TTTGTTTGAAATGAGCCGTATTCCGTTTGAGATTCAGGGCGATAACGTACAGGTGTACTGAATAACCGATCTGAATTTTA ATCGAACCAACGGGAAGAGA
Product: PTS system N-acetylgalactosamine-specific transporter subunit IIABC
Products: NA
Alternate protein names: EIICBA-Nag; EII-Nag; N-acetylglucosamine permease IIC component; PTS system N-acetylglucosamine-specific EIIC component; N-acetylglucosamine-specific phosphotransferase enzyme IIB component; PTS system N-acetylglucosamine-specific EIIB component; N-acetylglucosamine-specific phosphotransferase enzyme IIA component; PTS system N-acetylglucosamine-specific EIIA component [H]
Number of amino acids: Translated: 677; Mature: 676
Protein sequence:
>677_residues MSILGYLQKVGRALMVPVATLPAAAILMGVGYWIDPVGWGADNALAALFIKSGAAIIENMSVLFAIGVAYGMSKDKDGAA ALTGFVGFLVLTTLCSPAAVSMIKQIPLDQVPAAFGKIENQFVGILVGIISAELYNRFSGVELPKALSFFSGRRLVPILT SFLMIAVAFMLMYIWPLIYNALVTFGEYIKDLGSVGAGIYAFFNRLLIPVGLHHALNSVFWFDVAGINDIPNFLGGQESI NKGTGIVGITGRYQAGFFPIMMFGLPGAALAIYHCARPENKAKVAGIMMAGAFAAFFTGITEPLEFSFMFVAPVLYFLHA VLTGISVFIAASMHWIAGFGFSAGLVDMVLSSRNPLATQWYMLIPQGLIFFVIYYLVFRFTIQKFNLLTPGRELAVEGSE EDGYDVNVDKTPAVNESEINSLARRYIGAIGGSDNLTAIDACITRLRLNVKDSALVNDSVAKRLGASGVIRLNKQSVQII VGTRAELIAAAMRTVLAGGPIPAASSNAAPTGARPQAVINTAKTASLVLVSPITGDVVPLAQVPDEAFASKAVGEGVAIR PTDKIVVSPASGTIVKIFNTDHAFCLETETGAEIVVHIGIDTVKLNGQGFTRLVEEGTTVVAGQPVLELDLAYLNANAHS MISPVVVSNIDDYAGISLLASGSVVAGQSQLFEIRGK
Sequences:
>Translated_677_residues MSILGYLQKVGRALMVPVATLPAAAILMGVGYWIDPVGWGADNALAALFIKSGAAIIENMSVLFAIGVAYGMSKDKDGAA ALTGFVGFLVLTTLCSPAAVSMIKQIPLDQVPAAFGKIENQFVGILVGIISAELYNRFSGVELPKALSFFSGRRLVPILT SFLMIAVAFMLMYIWPLIYNALVTFGEYIKDLGSVGAGIYAFFNRLLIPVGLHHALNSVFWFDVAGINDIPNFLGGQESI NKGTGIVGITGRYQAGFFPIMMFGLPGAALAIYHCARPENKAKVAGIMMAGAFAAFFTGITEPLEFSFMFVAPVLYFLHA VLTGISVFIAASMHWIAGFGFSAGLVDMVLSSRNPLATQWYMLIPQGLIFFVIYYLVFRFTIQKFNLLTPGRELAVEGSE EDGYDVNVDKTPAVNESEINSLARRYIGAIGGSDNLTAIDACITRLRLNVKDSALVNDSVAKRLGASGVIRLNKQSVQII VGTRAELIAAAMRTVLAGGPIPAASSNAAPTGARPQAVINTAKTASLVLVSPITGDVVPLAQVPDEAFASKAVGEGVAIR PTDKIVVSPASGTIVKIFNTDHAFCLETETGAEIVVHIGIDTVKLNGQGFTRLVEEGTTVVAGQPVLELDLAYLNANAHS MISPVVVSNIDDYAGISLLASGSVVAGQSQLFEIRGK >Mature_676_residues SILGYLQKVGRALMVPVATLPAAAILMGVGYWIDPVGWGADNALAALFIKSGAAIIENMSVLFAIGVAYGMSKDKDGAAA LTGFVGFLVLTTLCSPAAVSMIKQIPLDQVPAAFGKIENQFVGILVGIISAELYNRFSGVELPKALSFFSGRRLVPILTS FLMIAVAFMLMYIWPLIYNALVTFGEYIKDLGSVGAGIYAFFNRLLIPVGLHHALNSVFWFDVAGINDIPNFLGGQESIN KGTGIVGITGRYQAGFFPIMMFGLPGAALAIYHCARPENKAKVAGIMMAGAFAAFFTGITEPLEFSFMFVAPVLYFLHAV LTGISVFIAASMHWIAGFGFSAGLVDMVLSSRNPLATQWYMLIPQGLIFFVIYYLVFRFTIQKFNLLTPGRELAVEGSEE DGYDVNVDKTPAVNESEINSLARRYIGAIGGSDNLTAIDACITRLRLNVKDSALVNDSVAKRLGASGVIRLNKQSVQIIV GTRAELIAAAMRTVLAGGPIPAASSNAAPTGARPQAVINTAKTASLVLVSPITGDVVPLAQVPDEAFASKAVGEGVAIRP TDKIVVSPASGTIVKIFNTDHAFCLETETGAEIVVHIGIDTVKLNGQGFTRLVEEGTTVVAGQPVLELDLAYLNANAHSM ISPVVVSNIDDYAGISLLASGSVVAGQSQLFEIRGK
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1263
COG function: function code G; Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786894, Length=683, Percent_Identity=52.8550512445095, Blast_Score=612, Evalue=1e-176, Organism=Escherichia coli, GI1787343, Length=500, Percent_Identity=36, Blast_Score=298, Evalue=6e-82, Organism=Escherichia coli, GI1787908, Length=537, Percent_Identity=33.8919925512104, Blast_Score=272, Evalue=4e-74, Organism=Escherichia coli, GI1788757, Length=152, Percent_Identity=45.3947368421053, Blast_Score=143, Evalue=3e-35, Organism=Escherichia coli, GI1790159, Length=170, Percent_Identity=34.7058823529412, Blast_Score=110, Evalue=4e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011055 - InterPro: IPR018113 - InterPro: IPR004719 - InterPro: IPR001127 - InterPro: IPR001996 - InterPro: IPR003352 - InterPro: IPR013013 - InterPro: IPR011535 - InterPro: IPR010974 [H]
Pfam domain/function: PF00358 PTS_EIIA_1; PF00367 PTS_EIIB; PF02378 PTS_EIIC [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 71696; Mature: 71564
Theoretical pI: Translated: 6.32; Mature: 6.32
Prosite motif: PS00371 PTS_EIIA_TYPE_1_HIS ; PS51093 PTS_EIIA_TYPE_1 ; PS01035 PTS_EIIB_TYPE_1_CYS ; PS51098 PTS_EIIB_TYPE_1 ; PS51103 PTS_EIIC_TYPE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSILGYLQKVGRALMVPVATLPAAAILMGVGYWIDPVGWGADNALAALFIKSGAAIIENM CCHHHHHHHHCHHHHHHHHHHHHHHHHHHHCHHCCCCCCCCCHHHHHHHHHCCHHHHHHH SVLFAIGVAYGMSKDKDGAAALTGFVGFLVLTTLCSPAAVSMIKQIPLDQVPAAFGKIEN HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHH QFVGILVGIISAELYNRFSGVELPKALSFFSGRRLVPILTSFLMIAVAFMLMYIWPLIYN HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ALVTFGEYIKDLGSVGAGIYAFFNRLLIPVGLHHALNSVFWFDVAGINDIPNFLGGQESI HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHCCCCHHC NKGTGIVGITGRYQAGFFPIMMFGLPGAALAIYHCARPENKAKVAGIMMAGAFAAFFTGI CCCCCEEEECCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC TEPLEFSFMFVAPVLYFLHAVLTGISVFIAASMHWIAGFGFSAGLVDMVLSSRNPLATQW CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHH YMLIPQGLIFFVIYYLVFRFTIQKFNLLTPGRELAVEGSEEDGYDVNVDKTPAVNESEIN HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEECCCCCCCEECCCCCCCCCHHHHH SLARRYIGAIGGSDNLTAIDACITRLRLNVKDSALVNDSVAKRLGASGVIRLNKQSVQII HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEECCCEEEEE VGTRAELIAAAMRTVLAGGPIPAASSNAAPTGARPQAVINTAKTASLVLVSPITGDVVPL ECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCEEEH AQVPDEAFASKAVGEGVAIRPTDKIVVSPASGTIVKIFNTDHAFCLETETGAEIVVHIGI HCCCHHHHHHHHHCCCEEECCCCCEEEECCCCCEEEEEECCCEEEEECCCCCEEEEEECC DTVKLNGQGFTRLVEEGTTVVAGQPVLELDLAYLNANAHSMISPVVVSNIDDYAGISLLA EEEEECCCHHHHHHHCCCEEEECCCHHEEEEHHCCCCHHHHHCHHHHCCCCCCCCCEEEE SGSVVAGQSQLFEIRGK CCCEEECCHHEEEECCC >Mature Secondary Structure SILGYLQKVGRALMVPVATLPAAAILMGVGYWIDPVGWGADNALAALFIKSGAAIIENM CHHHHHHHHCHHHHHHHHHHHHHHHHHHHCHHCCCCCCCCCHHHHHHHHHCCHHHHHHH SVLFAIGVAYGMSKDKDGAAALTGFVGFLVLTTLCSPAAVSMIKQIPLDQVPAAFGKIEN HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHH QFVGILVGIISAELYNRFSGVELPKALSFFSGRRLVPILTSFLMIAVAFMLMYIWPLIYN HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH ALVTFGEYIKDLGSVGAGIYAFFNRLLIPVGLHHALNSVFWFDVAGINDIPNFLGGQESI HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHCCCCHHC NKGTGIVGITGRYQAGFFPIMMFGLPGAALAIYHCARPENKAKVAGIMMAGAFAAFFTGI CCCCCEEEECCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC TEPLEFSFMFVAPVLYFLHAVLTGISVFIAASMHWIAGFGFSAGLVDMVLSSRNPLATQW CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHH YMLIPQGLIFFVIYYLVFRFTIQKFNLLTPGRELAVEGSEEDGYDVNVDKTPAVNESEIN HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEECCCCCCCEECCCCCCCCCHHHHH SLARRYIGAIGGSDNLTAIDACITRLRLNVKDSALVNDSVAKRLGASGVIRLNKQSVQII HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEECCCEEEEE VGTRAELIAAAMRTVLAGGPIPAASSNAAPTGARPQAVINTAKTASLVLVSPITGDVVPL ECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCEEEH AQVPDEAFASKAVGEGVAIRPTDKIVVSPASGTIVKIFNTDHAFCLETETGAEIVVHIGI HCCCHHHHHHHHHCCCEEECCCCCEEEECCCCCEEEEEECCCEEEEECCCCCEEEEEECC DTVKLNGQGFTRLVEEGTTVVAGQPVLELDLAYLNANAHSMISPVVVSNIDDYAGISLLA EEEEECCCHHHHHHHCCCEEEECCCHHEEEEHHCCCCHHHHHCHHHHCCCCCCCCCEEEE SGSVVAGQSQLFEIRGK CCCEEECCHHEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3284790; 3056518; 8905232; 9278503 [H]