Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
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Accession | NC_010125 |
Length | 3,944,163 |
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The map label for this gene is pstS [H]
Identifier: 162149580
GI number: 162149580
Start: 3903102
End: 3904106
Strand: Direct
Name: pstS [H]
Synonym: GDI_3819
Alternate gene names: 162149580
Gene position: 3903102-3904106 (Clockwise)
Preceding gene: 162149579
Following gene: 162149581
Centisome position: 98.96
GC content: 68.36
Gene sequence:
>1005_bases ATGCGTCGTTCTGTCACAGTGTTTGCCGCCGTCCTTCTGGGAACTGCCCCGGTTGCCCTTTCCGTCGCGCATGCCGCGAA CATCACCGGTGCCGGCTCCAGCTTCGCCGCCCCGATCTACGAGGCCTGGGGTTCGGCCGGCCGTAGCGCCAGCGGCGTCG CCGTCAACTACCAGAGCGTCGGGTCCAGCGCGGGCCAGAACCAGATCCTGGCCGGCACGGTCGATTTCGGCGCCTCGGAT GCCCCGATGGACCCCGCCAAGCTGCAGAAGGGCGCGCTGTTCCAGTTCCCGACGGTCATGGGCGGCATCGTTCCGGTCGT GAACATCCCGGGCATCGCCGCGAACACGCTGCGCCTGACCGGCGAGGTGCTGGCCGGCATCTATTCGGGCGACATCTCCT CGTGGAACGATGCGAAGATCACCGCCCTGAACCCGGGCGTGAACCTGCCGGACCTGCCCATCGCGACGGTGCACCGCGCC GACGGGTCGGGCACGACCTTCGTGTTCACGTCCTACCTCGCACGCTCGTCGCAGGCGTGGCATGACGGCACGGGCGCCGG CAGCTCGATTTCCTGGCCCGGCGGTGTCGGCGCGCGCGGCAATGACGGCGTCGCGGCGTCGGTCCGCAACACCGAAGGCG GCATCGGCTATGTCGAATATGCCTATGCCAGCCGCAACCATATGACGACGGTGCAGCTGAAGGACAAGGCCGGCGATTTC GTGACCGCCGACCTGGACAGCTTCTCGCGCGCCGCCGCCGCCGCCGACTGGAAGGGCGCCGCCAATTTCGCGGTCGACCT GCTGGATACGTCCGGCAAGGGCGCGTGGCCGATCGTCTCGGCGACCTACGTGCTGGTGCCGAAGCAGGCGAAGGATGCCG CCCAGGGCGCGGCCGTGCGTAAATTCTTCGGCTGGGCATTCGACAATGGCGACGGCATTGCCCGTGGCCTGGACTACGTC GTCCTGCCGGCCGAGGTGAAGGCGTCGATTCGCGCCGCCTGGTAA
Upstream 100 bases:
>100_bases CCCTGGCCAGCCGATCCGGGCTAGGAGAAGGGCAGCCTGGGGGGCGCTTAGCGGGGCCTGGCCGGGCTTGTCTGTCACGC TCGTCAGGGATCTGAACTCG
Downstream 100 bases:
>100_bases GGCATGCACCCGCCAACAGGCTTCCGCAAGGGGTCTGGAAACGCGTGTCTGACGGGCGGGGGCCTTGTGCCCCCGCCCGT TTTGTTTGTTCGGGGCGGTT
Product: phosphate-binding periplasmic protein
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: PBP [H]
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MRRSVTVFAAVLLGTAPVALSVAHAANITGAGSSFAAPIYEAWGSAGRSASGVAVNYQSVGSSAGQNQILAGTVDFGASD APMDPAKLQKGALFQFPTVMGGIVPVVNIPGIAANTLRLTGEVLAGIYSGDISSWNDAKITALNPGVNLPDLPIATVHRA DGSGTTFVFTSYLARSSQAWHDGTGAGSSISWPGGVGARGNDGVAASVRNTEGGIGYVEYAYASRNHMTTVQLKDKAGDF VTADLDSFSRAAAAADWKGAANFAVDLLDTSGKGAWPIVSATYVLVPKQAKDAAQGAAVRKFFGWAFDNGDGIARGLDYV VLPAEVKASIRAAW
Sequences:
>Translated_334_residues MRRSVTVFAAVLLGTAPVALSVAHAANITGAGSSFAAPIYEAWGSAGRSASGVAVNYQSVGSSAGQNQILAGTVDFGASD APMDPAKLQKGALFQFPTVMGGIVPVVNIPGIAANTLRLTGEVLAGIYSGDISSWNDAKITALNPGVNLPDLPIATVHRA DGSGTTFVFTSYLARSSQAWHDGTGAGSSISWPGGVGARGNDGVAASVRNTEGGIGYVEYAYASRNHMTTVQLKDKAGDF VTADLDSFSRAAAAADWKGAANFAVDLLDTSGKGAWPIVSATYVLVPKQAKDAAQGAAVRKFFGWAFDNGDGIARGLDYV VLPAEVKASIRAAW >Mature_334_residues MRRSVTVFAAVLLGTAPVALSVAHAANITGAGSSFAAPIYEAWGSAGRSASGVAVNYQSVGSSAGQNQILAGTVDFGASD APMDPAKLQKGALFQFPTVMGGIVPVVNIPGIAANTLRLTGEVLAGIYSGDISSWNDAKITALNPGVNLPDLPIATVHRA DGSGTTFVFTSYLARSSQAWHDGTGAGSSISWPGGVGARGNDGVAASVRNTEGGIGYVEYAYASRNHMTTVQLKDKAGDF VTADLDSFSRAAAAADWKGAANFAVDLLDTSGKGAWPIVSATYVLVPKQAKDAAQGAAVRKFFGWAFDNGDGIARGLDYV VLPAEVKASIRAAW
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
Organism=Escherichia coli, GI2367271, Length=316, Percent_Identity=49.3670886075949, Blast_Score=312, Evalue=2e-86,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005673 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34144; Mature: 34144
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRSVTVFAAVLLGTAPVALSVAHAANITGAGSSFAAPIYEAWGSAGRSASGVAVNYQSV CCCCHHHHHHHHHCCCCCEEEEHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEHHHC GSSAGQNQILAGTVDFGASDAPMDPAKLQKGALFQFPTVMGGIVPVVNIPGIAANTLRLT CCCCCCCCEEEEEECCCCCCCCCCHHHHCCCCEEECHHHHCCCEEEEECCCCCCCCEEEC GEVLAGIYSGDISSWNDAKITALNPGVNLPDLPIATVHRADGSGTTFVFTSYLARSSQAW HHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCEEEEEHHHHHCCCCC HDGTGAGSSISWPGGVGARGNDGVAASVRNTEGGIGYVEYAYASRNHMTTVQLKDKAGDF CCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCEEEEEECCCCCCE VTADLDSFSRAAAAADWKGAANFAVDLLDTSGKGAWPIVSATYVLVPKQAKDAAQGAAVR EEECHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEEEEEEEEECCHHHHHHHHHHH KFFGWAFDNGDGIARGLDYVVLPAEVKASIRAAW HHHCEEEECCCCHHCCCCEEEECHHHCCEEEECC >Mature Secondary Structure MRRSVTVFAAVLLGTAPVALSVAHAANITGAGSSFAAPIYEAWGSAGRSASGVAVNYQSV CCCCHHHHHHHHHCCCCCEEEEHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEHHHC GSSAGQNQILAGTVDFGASDAPMDPAKLQKGALFQFPTVMGGIVPVVNIPGIAANTLRLT CCCCCCCCEEEEEECCCCCCCCCCHHHHCCCCEEECHHHHCCCEEEEECCCCCCCCEEEC GEVLAGIYSGDISSWNDAKITALNPGVNLPDLPIATVHRADGSGTTFVFTSYLARSSQAW HHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCEEEEEHHHHHCCCCC HDGTGAGSSISWPGGVGARGNDGVAASVRNTEGGIGYVEYAYASRNHMTTVQLKDKAGDF CCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCEEEEEECCCCCCE VTADLDSFSRAAAAADWKGAANFAVDLLDTSGKGAWPIVSATYVLVPKQAKDAAQGAAVR EEECHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEEEEEEEEECCHHHHHHHHHHH KFFGWAFDNGDGIARGLDYVVLPAEVKASIRAAW HHHCEEEECCCCHHCCCCEEEECHHHCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11214968 [H]