Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
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Accession | NC_010125 |
Length | 3,944,163 |
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The map label for this gene is 162149563
Identifier: 162149563
GI number: 162149563
Start: 3883731
End: 3884147
Strand: Direct
Name: 162149563
Synonym: GDI_3801
Alternate gene names: NA
Gene position: 3883731-3884147 (Clockwise)
Preceding gene: 162149562
Following gene: 162149565
Centisome position: 98.47
GC content: 60.91
Gene sequence:
>417_bases ATGACCCGGCAGGAGGGGAAAATGCGATATCCTATCGTGATCGAGCGCGGTTCGGACGCTGAGGCATATGGCGTTGTCGT GCCTGATTTGCCGGGGTGCTTCTCCGCCGGCGACACGTTCGACGAGGCGGTGAGCAATGCTTCCGAGGCCATCGCTCTAT GGGTCGAAGATGCCATCGATAACGGGCAGTCCATCCCGCGTCCGTCGTCGCTCGATGGCCTGCGCGCCAGCCTGGAATGG TCTGGACCGGAATGGATCTGGGGCTTTGCGAGCGTCGATCCTACGTTGTTCGACGATACGTCCGAGCGTGTGAACATCAC ACTTCCGCGTCGTGTCCTGGCTCGGCTGGACAGCCGGGCAAAAGATGCGGGAGAAACACGCTCTGGGTTTATCGCCAAGC TGGCGCTAAGCGCATGA
Upstream 100 bases:
>100_bases TCCGCCACCCCGATCACGGACACTCGGTCACGGTGCCCCATCCCAAGAAGGGCTTGGGAAAGGGATTGGTCGCCGCCATT CGCAAGCAGGCCGGATTGAA
Downstream 100 bases:
>100_bases CGGGCACCCGTTGCCCCACCGCGAATTCATGTGACCGGCCGGGAGAAGCGCGGATAGAATTGCCGTGTGCAACACACAAC CGGTTTCGTAGCTGAAGTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MTRQEGKMRYPIVIERGSDAEAYGVVVPDLPGCFSAGDTFDEAVSNASEAIALWVEDAIDNGQSIPRPSSLDGLRASLEW SGPEWIWGFASVDPTLFDDTSERVNITLPRRVLARLDSRAKDAGETRSGFIAKLALSA
Sequences:
>Translated_138_residues MTRQEGKMRYPIVIERGSDAEAYGVVVPDLPGCFSAGDTFDEAVSNASEAIALWVEDAIDNGQSIPRPSSLDGLRASLEW SGPEWIWGFASVDPTLFDDTSERVNITLPRRVLARLDSRAKDAGETRSGFIAKLALSA >Mature_137_residues TRQEGKMRYPIVIERGSDAEAYGVVVPDLPGCFSAGDTFDEAVSNASEAIALWVEDAIDNGQSIPRPSSLDGLRASLEWS GPEWIWGFASVDPTLFDDTSERVNITLPRRVLARLDSRAKDAGETRSGFIAKLALSA
Specific function: Unknown
COG id: COG1598
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14974; Mature: 14843
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRQEGKMRYPIVIERGSDAEAYGVVVPDLPGCFSAGDTFDEAVSNASEAIALWVEDAID CCCCCCCEECCEEEECCCCCCEEEEECCCCCCCCCCCCCHHHHHCCHHHEEEEEEEHHHC NGQSIPRPSSLDGLRASLEWSGPEWIWGFASVDPTLFDDTSERVNITLPRRVLARLDSRA CCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCEEECCCCCEEEEEEHHHHHHHHHHHC KDAGETRSGFIAKLALSA CCCCCCCCCEEEEEEECC >Mature Secondary Structure TRQEGKMRYPIVIERGSDAEAYGVVVPDLPGCFSAGDTFDEAVSNASEAIALWVEDAID CCCCCCEECCEEEECCCCCCEEEEECCCCCCCCCCCCCHHHHHCCHHHEEEEEEEHHHC NGQSIPRPSSLDGLRASLEWSGPEWIWGFASVDPTLFDDTSERVNITLPRRVLARLDSRA CCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCEEECCCCCEEEEEEHHHHHHHHHHHC KDAGETRSGFIAKLALSA CCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA