Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
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Accession | NC_010125 |
Length | 3,944,163 |
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The map label for this gene is sacC [H]
Identifier: 162149498
GI number: 162149498
Start: 3819986
End: 3821677
Strand: Direct
Name: sacC [H]
Synonym: GDI_3736
Alternate gene names: 162149498
Gene position: 3819986-3821677 (Clockwise)
Preceding gene: 162149497
Following gene: 162149499
Centisome position: 96.85
GC content: 67.08
Gene sequence:
>1692_bases ATGGCCCTGGGGGCCGCCGGAATGGGCGGCGGCGCACGCGCCGACACGCCCGCGCCATCGGCCCCCGCCGCGCCCACGCC GCCCAAGGCGCCGGACCGGCAGCGCAAGGCCGAACCCAATGCCTCGCATCCCTCGCCTGCCGACCAGCCGGGCGTGGTCT CGCGCCCGGTCGTGAAGACGCAAAGCGATATCTTCTACCGCCCGACGATCCATTTCTCGCCGACCAGCGGGTTCATGAAC GATCCCAACGGCCTGATCTTCGACGGCACGCGCTATCATCTGTATTACCAGTACGATCCGTTCGCCCCCTATGCGGGGCG CGTGCATTGGGGCCATGCGACCAGCAGCGACATGCTGCACTGGCAGGACCAGCCCGTCGCCATTCCCGAAACGAAGGACG GCGAGGCCTATACCGGCTGCGCGGTCATGGACACGGCGAATGCCTCGGGCCTGTTCGAGCCCGGCCCGGACGGCAAGGTC CAGGACGGCAGGACCGGAGGCGGGATGGTCGCGATCTACACCCGCGCCACCCCGCAAAGGCAGGCGCAGTACCTGGCCAC CAGCCGCGACAACGGCCAGACCTTCACTGAATACGCCCATAATCCGATCCTGGATATCGGCAGCAATTCCTTCCGCGACC CGCAGGTGCTGTTTCATAAGCCCACGAACCAGTGGGTCATGGTCATCGCCAAGTCACGCCTGCACCAGATCGCGTTCTAC GCCTCCATCGACCTGATCCATTGGGTGCATCTCAGCGATTTCGGCCCTTCCGGCCTGTTCGGGGTCGATTACGAATGTCC GAACCTGATCGAAATCCCGCTGGAGGGCGGCGGCACGCGGTGGGTGCTGTTCGTTTCGGTCAATCCGGGCGGCCCGACCG GCGGCAGCATCACCCAGTATTTCGTGGGCACGTTCGACGGCACGCGCTTCATTCCGGACGACACGGTGATCGGCCTGACC GACTTCGCCAAGGACGCCTACGCCCTGCAGGTCTATAGCGGCATGCCGGACGGCCAGGCGGTGTCGATCGCCTGGTTCGG CAACTGGCAGTATTGCCAGGAACTGCCGACGCAAAGCTGGCGCGGCACGATGACCTTGCCCCGGACGATGACGCTGCGGC GCGATTTCGCCGGCTGGATCCGGCTGGCGCAGGCCCCGCGCGGGCTGGAGGCCCTGCGCGGGCCGGCCATTCCCTTCCCC GTCACGCGCCTGGCCGCCGGGTCCAGCACCCAGGTCGCGCTGCCGCCCGGCACGGCGCTGGACCTGGCGATGAGCGTCAC CGTCGACGAACGTCCGCACGGCCTGCCGCTGGGCGACAAGGGACGCACCGGCCGTTTCGTCATCGTCTTCGGCAACGAGC AGGGCGAATCCCTGACCATCGGGTTCGACGCGTTTTCCGGCCAGATCTGGCTGGACCGCAACGACCTCCGGGGTTTCAAG CAGCCATTCTTCACCGGCGAGTTCTCGACCGTGCTGAACCCGGACGACCGGCATTTCGAGGTCCGGATCGTGCTGGATGC CTGCACGCTGGAAATCTTCGCCAATGGCGGCCTGTCGGTCGGCACGGCCCTGATCTACCCCGTCGCCCCGCTCGATGTCC TGCGCCTGGAAGCCAGCGGCGCCGCCGCCACGGTCGAAAAGCTCGCCCTGTATCCGCTGCAAAAGGCGATGGACCGCGAA ACGGCGGTGTAA
Upstream 100 bases:
>100_bases GACGATTGACTGGCCCGACGCGCCGGAGCTTTCTACACTGGACGGCATGACGGACGATCGATTTTCCCGCCTGAGCCGCC GTGGCGCGCTTTCCTCGCTC
Downstream 100 bases:
>100_bases GTGTCTGAGCGGAGGGGCGTGCATTGTCGCGGGGATCTTGCGGCACGTGCTGCCGATCGGCGCAGGCGGTATGCGCGGCC ACGGTGCCTTTGTGCTTGCG
Product: invertase
Products: NA
Alternate protein names: Beta-D-fructofuranosidase; Exo-beta-D-fructosidase; Exo-levanase [H]
Number of amino acids: Translated: 563; Mature: 562
Protein sequence:
>563_residues MALGAAGMGGGARADTPAPSAPAAPTPPKAPDRQRKAEPNASHPSPADQPGVVSRPVVKTQSDIFYRPTIHFSPTSGFMN DPNGLIFDGTRYHLYYQYDPFAPYAGRVHWGHATSSDMLHWQDQPVAIPETKDGEAYTGCAVMDTANASGLFEPGPDGKV QDGRTGGGMVAIYTRATPQRQAQYLATSRDNGQTFTEYAHNPILDIGSNSFRDPQVLFHKPTNQWVMVIAKSRLHQIAFY ASIDLIHWVHLSDFGPSGLFGVDYECPNLIEIPLEGGGTRWVLFVSVNPGGPTGGSITQYFVGTFDGTRFIPDDTVIGLT DFAKDAYALQVYSGMPDGQAVSIAWFGNWQYCQELPTQSWRGTMTLPRTMTLRRDFAGWIRLAQAPRGLEALRGPAIPFP VTRLAAGSSTQVALPPGTALDLAMSVTVDERPHGLPLGDKGRTGRFVIVFGNEQGESLTIGFDAFSGQIWLDRNDLRGFK QPFFTGEFSTVLNPDDRHFEVRIVLDACTLEIFANGGLSVGTALIYPVAPLDVLRLEASGAAATVEKLALYPLQKAMDRE TAV
Sequences:
>Translated_563_residues MALGAAGMGGGARADTPAPSAPAAPTPPKAPDRQRKAEPNASHPSPADQPGVVSRPVVKTQSDIFYRPTIHFSPTSGFMN DPNGLIFDGTRYHLYYQYDPFAPYAGRVHWGHATSSDMLHWQDQPVAIPETKDGEAYTGCAVMDTANASGLFEPGPDGKV QDGRTGGGMVAIYTRATPQRQAQYLATSRDNGQTFTEYAHNPILDIGSNSFRDPQVLFHKPTNQWVMVIAKSRLHQIAFY ASIDLIHWVHLSDFGPSGLFGVDYECPNLIEIPLEGGGTRWVLFVSVNPGGPTGGSITQYFVGTFDGTRFIPDDTVIGLT DFAKDAYALQVYSGMPDGQAVSIAWFGNWQYCQELPTQSWRGTMTLPRTMTLRRDFAGWIRLAQAPRGLEALRGPAIPFP VTRLAAGSSTQVALPPGTALDLAMSVTVDERPHGLPLGDKGRTGRFVIVFGNEQGESLTIGFDAFSGQIWLDRNDLRGFK QPFFTGEFSTVLNPDDRHFEVRIVLDACTLEIFANGGLSVGTALIYPVAPLDVLRLEASGAAATVEKLALYPLQKAMDRE TAV >Mature_562_residues ALGAAGMGGGARADTPAPSAPAAPTPPKAPDRQRKAEPNASHPSPADQPGVVSRPVVKTQSDIFYRPTIHFSPTSGFMND PNGLIFDGTRYHLYYQYDPFAPYAGRVHWGHATSSDMLHWQDQPVAIPETKDGEAYTGCAVMDTANASGLFEPGPDGKVQ DGRTGGGMVAIYTRATPQRQAQYLATSRDNGQTFTEYAHNPILDIGSNSFRDPQVLFHKPTNQWVMVIAKSRLHQIAFYA SIDLIHWVHLSDFGPSGLFGVDYECPNLIEIPLEGGGTRWVLFVSVNPGGPTGGSITQYFVGTFDGTRFIPDDTVIGLTD FAKDAYALQVYSGMPDGQAVSIAWFGNWQYCQELPTQSWRGTMTLPRTMTLRRDFAGWIRLAQAPRGLEALRGPAIPFPV TRLAAGSSTQVALPPGTALDLAMSVTVDERPHGLPLGDKGRTGRFVIVFGNEQGESLTIGFDAFSGQIWLDRNDLRGFKQ PFFTGEFSTVLNPDDRHFEVRIVLDACTLEIFANGGLSVGTALIYPVAPLDVLRLEASGAAATVEKLALYPLQKAMDRET AV
Specific function: Exo-fructosidase that can hydrolyze both levan and inulin, leading to the production of free fructose. Is also able to hydrolyze sucrose and to a small extent raffinose, but not melezitose, stachylose, cellobiose, maltose, and lactose [H]
COG id: COG1621
COG function: function code G; Beta-fructosidases (levanase/invertase)
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 32 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322029, Length=495, Percent_Identity=36.7676767676768, Blast_Score=298, Evalue=2e-81,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008985 - InterPro: IPR010496 - InterPro: IPR001362 - InterPro: IPR018053 - InterPro: IPR013189 - InterPro: IPR013148 - InterPro: IPR011040 [H]
Pfam domain/function: PF06439 DUF1080; PF08244 Glyco_hydro_32C; PF00251 Glyco_hydro_32N [H]
EC number: =3.2.1.80 [H]
Molecular weight: Translated: 61069; Mature: 60938
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: PS00609 GLYCOSYL_HYDROL_F32
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALGAAGMGGGARADTPAPSAPAAPTPPKAPDRQRKAEPNASHPSPADQPGVVSRPVVKT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEC QSDIFYRPTIHFSPTSGFMNDPNGLIFDGTRYHLYYQYDPFAPYAGRVHWGHATSSDMLH CCCEEECCEEEECCCCCCCCCCCCEEECCEEEEEEEEECCCCCCCCEEEECCCCCCCCEE WQDQPVAIPETKDGEAYTGCAVMDTANASGLFEPGPDGKVQDGRTGGGMVAIYTRATPQR ECCCCEECCCCCCCCEEECEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHH QAQYLATSRDNGQTFTEYAHNPILDIGSNSFRDPQVLFHKPTNQWVMVIAKSRLHQIAFY HHHHHEECCCCCCCHHHHCCCCEEECCCCCCCCCEEEEECCCCCEEEEEEHHHHHEEEEE ASIDLIHWVHLSDFGPSGLFGVDYECPNLIEIPLEGGGTRWVLFVSVNPGGPTGGSITQY EEEEEEEEEEECCCCCCCEEECCCCCCCEEEEEECCCCEEEEEEEEECCCCCCCCCEEEE FVGTFDGTRFIPDDTVIGLTDFAKDAYALQVYSGMPDGQAVSIAWFGNWQYCQELPTQSW EEEECCCCEECCCCCEEEHHHHCCCEEEEEEECCCCCCCEEEEEEECCHHHHHHCCCCCC RGTMTLPRTMTLRRDFAGWIRLAQAPRGLEALRGPAIPFPVTRLAAGSSTQVALPPGTAL CCCEECCCEEHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHCCCCCCEEEECCCCEE DLAMSVTVDERPHGLPLGDKGRTGRFVIVFGNEQGESLTIGFDAFSGQIWLDRNDLRGFK EEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCEEEEECHHCCHHH QPFFTGEFSTVLNPDDRHFEVRIVLDACTLEIFANGGLSVGTALIYPVAPLDVLRLEASG CCCCCCCCCEEECCCCCEEEEEEEEEEEEEEEEECCCCCCCEEEEECCCCCEEEEEECCC AAATVEKLALYPLQKAMDRETAV CHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ALGAAGMGGGARADTPAPSAPAAPTPPKAPDRQRKAEPNASHPSPADQPGVVSRPVVKT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEC QSDIFYRPTIHFSPTSGFMNDPNGLIFDGTRYHLYYQYDPFAPYAGRVHWGHATSSDMLH CCCEEECCEEEECCCCCCCCCCCCEEECCEEEEEEEEECCCCCCCCEEEECCCCCCCCEE WQDQPVAIPETKDGEAYTGCAVMDTANASGLFEPGPDGKVQDGRTGGGMVAIYTRATPQR ECCCCEECCCCCCCCEEECEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHH QAQYLATSRDNGQTFTEYAHNPILDIGSNSFRDPQVLFHKPTNQWVMVIAKSRLHQIAFY HHHHHEECCCCCCCHHHHCCCCEEECCCCCCCCCEEEEECCCCCEEEEEEHHHHHEEEEE ASIDLIHWVHLSDFGPSGLFGVDYECPNLIEIPLEGGGTRWVLFVSVNPGGPTGGSITQY EEEEEEEEEEECCCCCCCEEECCCCCCCEEEEEECCCCEEEEEEEEECCCCCCCCCEEEE FVGTFDGTRFIPDDTVIGLTDFAKDAYALQVYSGMPDGQAVSIAWFGNWQYCQELPTQSW EEEECCCCEECCCCCEEEHHHHCCCEEEEEEECCCCCCCEEEEEEECCHHHHHHCCCCCC RGTMTLPRTMTLRRDFAGWIRLAQAPRGLEALRGPAIPFPVTRLAAGSSTQVALPPGTAL CCCEECCCEEHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHCCCCCCEEEECCCCEE DLAMSVTVDERPHGLPLGDKGRTGRFVIVFGNEQGESLTIGFDAFSGQIWLDRNDLRGFK EEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCEEEEECHHCCHHH QPFFTGEFSTVLNPDDRHFEVRIVLDACTLEIFANGGLSVGTALIYPVAPLDVLRLEASG CCCCCCCCCEEECCCCCEEEEEEEEEEEEEEEEECCCCCCCEEEEECCCCCEEEEEECCC AAATVEKLALYPLQKAMDRETAV CHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3112519; 3120151; 9141695; 9384377; 2117666 [H]