Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
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Accession | NC_010125 |
Length | 3,944,163 |
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The map label for this gene is bfr [H]
Identifier: 162149456
GI number: 162149456
Start: 3770718
End: 3771206
Strand: Direct
Name: bfr [H]
Synonym: GDI_3694
Alternate gene names: 162149456
Gene position: 3770718-3771206 (Clockwise)
Preceding gene: 162149454
Following gene: 162149457
Centisome position: 95.6
GC content: 61.15
Gene sequence:
>489_bases ATGCCGATCAAGGACCCGAAGGTCATCGAGCACCTGAACACCCAGCTGACGAACGAGCTGACGGCGATCAACCAGTATTT CCTGCACGCCCGCACCCTGCGCCACTGGGGCGTCACCCTGCTGGGCAAGAAGGAATATGAGGAATCGATCGAGGAGATGC GCCACGCCGACTGGCTGATCGAGCGCATTCTGTTTCTGGGTGGCCTGCCGAACGTGCAGCGGCTGAACACCATCCTGATC GGCCAGGACGTGAAGGAGATCCTGGAGTGCGACCTGAAGCTCGAGGAAAAGGCGATCAACGACCTGCGTGAAGGCATCGC GTATTGCGAGAGCGTGCGCGACTACGTCTCGCGCGACCTTCTGCTGAAGATCCTCGAGAACGAGGAAGAGCACGAGGACT TCCTCGACCGCCAGTTCGACCTGATCAAGCAGGTCGGGATCGAGCGGTACATCCACCTGAACGCCGCCCCGGCGCCCGAG CAGGACTGA
Upstream 100 bases:
>100_bases TTTATCGTATTGATATTGAATGGTTTTTTCGATTTACAGGCGGGGCTGGCCGCGCTAGGGATAGAATCGAGACGATTCCA CCCATTGACGAGGTCGAACC
Downstream 100 bases:
>100_bases GCGGGACCAGGGCGTCCCCCGACGGGGATGCCCTGAAACCGGACCATTTCATTCTACCGGGCCGCGCCCATGTCTTCCGG GCGGGGCCACATGATCTGGG
Product: bacterioferritin
Products: NA
Alternate protein names: BFR; Cytochrome b-557.5 [H]
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MPIKDPKVIEHLNTQLTNELTAINQYFLHARTLRHWGVTLLGKKEYEESIEEMRHADWLIERILFLGGLPNVQRLNTILI GQDVKEILECDLKLEEKAINDLREGIAYCESVRDYVSRDLLLKILENEEEHEDFLDRQFDLIKQVGIERYIHLNAAPAPE QD
Sequences:
>Translated_162_residues MPIKDPKVIEHLNTQLTNELTAINQYFLHARTLRHWGVTLLGKKEYEESIEEMRHADWLIERILFLGGLPNVQRLNTILI GQDVKEILECDLKLEEKAINDLREGIAYCESVRDYVSRDLLLKILENEEEHEDFLDRQFDLIKQVGIERYIHLNAAPAPE QD >Mature_161_residues PIKDPKVIEHLNTQLTNELTAINQYFLHARTLRHWGVTLLGKKEYEESIEEMRHADWLIERILFLGGLPNVQRLNTILIG QDVKEILECDLKLEEKAINDLREGIAYCESVRDYVSRDLLLKILENEEEHEDFLDRQFDLIKQVGIERYIHLNAAPAPEQ D
Specific function: May perform analogous functions in iron detoxification and storage to that of animal ferritins [H]
COG id: COG2193
COG function: function code P; Bacterioferritin (cytochrome b1)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ferritin-like diiron domain [H]
Homologues:
Organism=Escherichia coli, GI1789733, Length=148, Percent_Identity=54.7297297297297, Blast_Score=163, Evalue=4e-42,
Paralogues:
None
Copy number: 1639 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002024 - InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: NA
Molecular weight: Translated: 19018; Mature: 18887
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIKDPKVIEHLNTQLTNELTAINQYFLHARTLRHWGVTLLGKKEYEESIEEMRHADWLI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCHHHHHHHHHHHHHHHHHH ERILFLGGLPNVQRLNTILIGQDVKEILECDLKLEEKAINDLREGIAYCESVRDYVSRDL HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLKILENEEEHEDFLDRQFDLIKQVGIERYIHLNAAPAPEQD HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCC >Mature Secondary Structure PIKDPKVIEHLNTQLTNELTAINQYFLHARTLRHWGVTLLGKKEYEESIEEMRHADWLI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCHHHHHHHHHHHHHHHHHH ERILFLGGLPNVQRLNTILIGQDVKEILECDLKLEEKAINDLREGIAYCESVRDYVSRDL HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLKILENEEEHEDFLDRQFDLIKQVGIERYIHLNAAPAPEQD HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1549605; 1904771 [H]