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The map label for this gene is yciF [H]

Identifier: 162149289

GI number: 162149289

Start: 3623017

End: 3623523

Strand: Direct

Name: yciF [H]

Synonym: GDI_3521

Alternate gene names: 162149289

Gene position: 3623017-3623523 (Clockwise)

Preceding gene: 162149288

Following gene: 162149290

Centisome position: 91.86

GC content: 64.5

Gene sequence:

>507_bases
ATGGCAACCCAGGACAAGACTCTGTCCGACGCGTTCTACGAAACGCTGAAGGACATCTATTTCGCCGAAAAGCAGATCCT
GAAGGCGCTCCGCAGGTCGGTGCACGCCGCCCAGGCGCCGGATCTCAAGAAGGCGTTCGAAACCCACGCGACCGAGACCG
CCACCCACGTCGAACGCCTGAACGACGTCTTCGGCATCATCGGCCGCGCCCCCCGGGCCAAGACCTGCGAGGCAACGCAG
GGCATCCTGGCCGAAATGGAGGAAGACCTCGAGGAATTCGGCTCGACCAAGGCGGCGGACGCCGTGCTGATCGGGTCCGC
CCAGGCCATCGAACATTACGAGATCGCGCGCTATGGCACGCTCAGGGCGTGGGCCGCCGATCTCGGCCTGGACGATGCGG
AAAAACTGCTGGCCGAAACCCTGGAAGAGGAGAAGCGGACCGACGCCCTGCTCTCCGAGATCGCGGAACGGGAAAGCAAT
CCGCAGGCCCAACGCCAGACGGCCTGA

Upstream 100 bases:

>100_bases
ACGCCGCCCTCTCCAGCAGAACCTGCACGTGTAGAGGCTGATTTTCCGGGACGACGTTTGCCGACCCCGTGCGGGGCCAT
AAAATGGAAAGGCAATCATC

Downstream 100 bases:

>100_bases
CCCACCCGACACCAGGGACGAAGGGGGGTCGCCCGACGGGCGGCTCCCCGCGTCGCGCTATCACCATCATGCGAAGGATC
GCGCCGAACATGACGCTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MATQDKTLSDAFYETLKDIYFAEKQILKALRRSVHAAQAPDLKKAFETHATETATHVERLNDVFGIIGRAPRAKTCEATQ
GILAEMEEDLEEFGSTKAADAVLIGSAQAIEHYEIARYGTLRAWAADLGLDDAEKLLAETLEEEKRTDALLSEIAERESN
PQAQRQTA

Sequences:

>Translated_168_residues
MATQDKTLSDAFYETLKDIYFAEKQILKALRRSVHAAQAPDLKKAFETHATETATHVERLNDVFGIIGRAPRAKTCEATQ
GILAEMEEDLEEFGSTKAADAVLIGSAQAIEHYEIARYGTLRAWAADLGLDDAEKLLAETLEEEKRTDALLSEIAERESN
PQAQRQTA
>Mature_167_residues
ATQDKTLSDAFYETLKDIYFAEKQILKALRRSVHAAQAPDLKKAFETHATETATHVERLNDVFGIIGRAPRAKTCEATQG
ILAEMEEDLEEFGSTKAADAVLIGSAQAIEHYEIARYGTLRAWAADLGLDDAEKLLAETLEEEKRTDALLSEIAERESNP
QAQRQTA

Specific function: Unknown

COG id: COG3685

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787512, Length=163, Percent_Identity=41.1042944785276, Blast_Score=107, Evalue=5e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010287
- InterPro:   IPR012347
- InterPro:   IPR009078 [H]

Pfam domain/function: PF05974 DUF892 [H]

EC number: NA

Molecular weight: Translated: 18610; Mature: 18479

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATQDKTLSDAFYETLKDIYFAEKQILKALRRSVHAAQAPDLKKAFETHATETATHVERL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
NDVFGIIGRAPRAKTCEATQGILAEMEEDLEEFGSTKAADAVLIGSAQAIEHYEIARYGT
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHH
LRAWAADLGLDDAEKLLAETLEEEKRTDALLSEIAERESNPQAQRQTA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCC
>Mature Secondary Structure 
ATQDKTLSDAFYETLKDIYFAEKQILKALRRSVHAAQAPDLKKAFETHATETATHVERL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
NDVFGIIGRAPRAKTCEATQGILAEMEEDLEEFGSTKAADAVLIGSAQAIEHYEIARYGT
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHH
LRAWAADLGLDDAEKLLAETLEEEKRTDALLSEIAERESNPQAQRQTA
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3058546; 9097039; 9278503; 8455549 [H]