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The map label for this gene is oprB [H]

Identifier: 162149282

GI number: 162149282

Start: 3615809

End: 3617326

Strand: Direct

Name: oprB [H]

Synonym: GDI_3514

Alternate gene names: 162149282

Gene position: 3615809-3617326 (Clockwise)

Preceding gene: 162149280

Following gene: 162149284

Centisome position: 91.67

GC content: 64.36

Gene sequence:

>1518_bases
GTGGTGCGCCTTTTCCTTTCGACTCAGCGGTCAGTTGCCCCCTCAATGCGGTTCCTCTCTGTCCGGCGCATCGACCGGTC
CTTTCGTCGCGGACTGACGGCCTGCGCGCTCAGCACCCTTCTGCCGCATTGCATCCCCGCCGCACACGCGCAGGTGCTCG
ATAACGATATCGGCTCGGCCCCCAGCATCCGCGTCAGCACGCCGCTGCCCGCGGCGGCGTCGCTGACGACATCCGTTCCG
CCCTTTTCCCAGCCCGAGGCGCTGTTTCCCAACCCGTTCGGGCTGACGAGATACCTGCGCGATCGCGGCATCAATTTCCT
GTTCGACAACACCAACGAATTCGCGGGCGCGCTGACGCAGCCGACCCCCGGATTCCGGAATTATCGCCAGGGCGCCAGCA
ATGCCGGTCAGTACGCCAACGAACTGGACATCAACTGGGAGAAGCTGGCGGGCCTGGCCGGCTTTGCCACCCATGTCATC
ACGGTGGGGCGGTACGGCACCACCGCCAACCGCATGTTCGGCGACTGGCTGGACCACGCGTCGGAAGATTACGGCGGCGG
CGGCAACGTCGCGGTGCATCTGGTGCTGGCCTATGGCGAGGAAACCCTGTTCGGCGGCCGCCTGGCCATCGCGGCGGGGC
GTATTCCCCTGGCGTCGGATTTCGCGGCCAGCCCGCTGTTCTGCAATTTCATGAACGGCAGCATGTGCGGCCGCCCCAAG
GGCATTACGGATTCGAACTACATGCCAGGCTATCCGGCCTCGACCTGGGGGTTCCGCGTCCGGGGCCGACCCACCCGCGC
CACCTATATCCAGACCGGTGTCTATCCGATGGAAAACGGCGTCTATGCCGTGGCCCAGCACCGCACCGGGTTCAAGTTCA
ACGGGTCCAACATCCTGGGCTACACCATCCCCGTCGAAACGGGATGGGAACCCGTGTTCGGGCACGGCACGCTGCCCGGA
CATTACAAGGTCGGGGCGGCGGCGCTGGACGAACCGATGCCCGACAACCTGTTCGACAACGACGGGCGGCCCTACGCGCT
GAGCGGCCGCGCGCCGCGCATGCACAGCGCGGGATGGGAAAGCTGGGCGATGTTCGACCAGCGGCTCTATCACCCGAAAG
GTGGCGGCAAGGATGCCGGAATCACGATGCTGACCGGCATCACCTATAACGATCCGCATACGTCACTGCGGAACTACGTG
GGCTATGTCGCCTTCCTGGACCGGGGTTTCTGGCCCTCGCGCCCCTTCGACACGATCGGCGCCGCGTTTACCTATACCAA
AATCGACCGTGGGGTGTCGCTGACCGACGGGTACCTGATGAACGTGGGAAAGTCCCTGCCGAACCACGCGACCGGCATCC
AGGGCCATGCCGAGGTGCTGGAAGTGAACTACGCCATCCATGTCTGCCGTGGCGTGGTGTTCCAGCCGGTGTTCGAATAT
TATTTCAACCCCAACGCCCAGTCCAACCTGCGCAACGCCACGCTGCTGGGCTTCAAGAGCCATATCGAAATCCTGTGA

Upstream 100 bases:

>100_bases
CTGACGCCGGAACAGGCAAGCCGCGCCCGGGCAGGCAAAACCGGATAATTTTCTTGTATTGACGCGGCAATGCGGGGACA
GCCATGCTGAAACGTGATAC

Downstream 100 bases:

>100_bases
CCGGGCGCGCCGGTTCGTCGTCGGCGCGCCTCCGCAGAGACAGGCTTTACCCCTGCTGGTTCGGGTCGGTCATCTGCACG
GGCGCGGTGGGGAACTTGCC

Product: carbohydrate-selective porin

Products: NA

Alternate protein names: Glucose porin; Outer membrane protein D1 [H]

Number of amino acids: Translated: 505; Mature: 505

Protein sequence:

>505_residues
MVRLFLSTQRSVAPSMRFLSVRRIDRSFRRGLTACALSTLLPHCIPAAHAQVLDNDIGSAPSIRVSTPLPAAASLTTSVP
PFSQPEALFPNPFGLTRYLRDRGINFLFDNTNEFAGALTQPTPGFRNYRQGASNAGQYANELDINWEKLAGLAGFATHVI
TVGRYGTTANRMFGDWLDHASEDYGGGGNVAVHLVLAYGEETLFGGRLAIAAGRIPLASDFAASPLFCNFMNGSMCGRPK
GITDSNYMPGYPASTWGFRVRGRPTRATYIQTGVYPMENGVYAVAQHRTGFKFNGSNILGYTIPVETGWEPVFGHGTLPG
HYKVGAAALDEPMPDNLFDNDGRPYALSGRAPRMHSAGWESWAMFDQRLYHPKGGGKDAGITMLTGITYNDPHTSLRNYV
GYVAFLDRGFWPSRPFDTIGAAFTYTKIDRGVSLTDGYLMNVGKSLPNHATGIQGHAEVLEVNYAIHVCRGVVFQPVFEY
YFNPNAQSNLRNATLLGFKSHIEIL

Sequences:

>Translated_505_residues
MVRLFLSTQRSVAPSMRFLSVRRIDRSFRRGLTACALSTLLPHCIPAAHAQVLDNDIGSAPSIRVSTPLPAAASLTTSVP
PFSQPEALFPNPFGLTRYLRDRGINFLFDNTNEFAGALTQPTPGFRNYRQGASNAGQYANELDINWEKLAGLAGFATHVI
TVGRYGTTANRMFGDWLDHASEDYGGGGNVAVHLVLAYGEETLFGGRLAIAAGRIPLASDFAASPLFCNFMNGSMCGRPK
GITDSNYMPGYPASTWGFRVRGRPTRATYIQTGVYPMENGVYAVAQHRTGFKFNGSNILGYTIPVETGWEPVFGHGTLPG
HYKVGAAALDEPMPDNLFDNDGRPYALSGRAPRMHSAGWESWAMFDQRLYHPKGGGKDAGITMLTGITYNDPHTSLRNYV
GYVAFLDRGFWPSRPFDTIGAAFTYTKIDRGVSLTDGYLMNVGKSLPNHATGIQGHAEVLEVNYAIHVCRGVVFQPVFEY
YFNPNAQSNLRNATLLGFKSHIEIL
>Mature_505_residues
MVRLFLSTQRSVAPSMRFLSVRRIDRSFRRGLTACALSTLLPHCIPAAHAQVLDNDIGSAPSIRVSTPLPAAASLTTSVP
PFSQPEALFPNPFGLTRYLRDRGINFLFDNTNEFAGALTQPTPGFRNYRQGASNAGQYANELDINWEKLAGLAGFATHVI
TVGRYGTTANRMFGDWLDHASEDYGGGGNVAVHLVLAYGEETLFGGRLAIAAGRIPLASDFAASPLFCNFMNGSMCGRPK
GITDSNYMPGYPASTWGFRVRGRPTRATYIQTGVYPMENGVYAVAQHRTGFKFNGSNILGYTIPVETGWEPVFGHGTLPG
HYKVGAAALDEPMPDNLFDNDGRPYALSGRAPRMHSAGWESWAMFDQRLYHPKGGGKDAGITMLTGITYNDPHTSLRNYV
GYVAFLDRGFWPSRPFDTIGAAFTYTKIDRGVSLTDGYLMNVGKSLPNHATGIQGHAEVLEVNYAIHVCRGVVFQPVFEY
YFNPNAQSNLRNATLLGFKSHIEIL

Specific function: Substrate-selective channel for a variety of different sugars. Could potentially facilitate the diffusion of diverse compounds, dependent on the presence of a hydroxyl group, but is presumably restricted to carbohydrates. Involved in the transport of gluc

COG id: COG3659

COG function: function code M; Carbohydrate-selective porin

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the oprB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007049 [H]

Pfam domain/function: PF04966 OprB [H]

EC number: NA

Molecular weight: Translated: 55222; Mature: 55222

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRLFLSTQRSVAPSMRFLSVRRIDRSFRRGLTACALSTLLPHCIPAAHAQVLDNDIGSA
CEEEEECCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PSIRVSTPLPAAASLTTSVPPFSQPEALFPNPFGLTRYLRDRGINFLFDNTNEFAGALTQ
CCEEECCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCHHHHCCCCC
PTPGFRNYRQGASNAGQYANELDINWEKLAGLAGFATHVITVGRYGTTANRMFGDWLDHA
CCCCHHHHHHCCCHHHCCHHHCCCCHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHC
SEDYGGGGNVAVHLVLAYGEETLFGGRLAIAAGRIPLASDFAASPLFCNFMNGSMCGRPK
CCCCCCCCCEEEEEEEEECCCEEECCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCC
GITDSNYMPGYPASTWGFRVRGRPTRATYIQTGVYPMENGVYAVAQHRTGFKFNGSNILG
CCCCCCCCCCCCCCCCCEEECCCCCCEEEEEECCEECCCCEEEEEECCCCCEECCCEEEE
YTIPVETGWEPVFGHGTLPGHYKVGAAALDEPMPDNLFDNDGRPYALSGRAPRMHSAGWE
EEEECCCCCCEECCCCCCCCCEECCHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCH
SWAMFDQRLYHPKGGGKDAGITMLTGITYNDPHTSLRNYVGYVAFLDRGFWPSRPFDTIG
HHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCHHHHC
AAFTYTKIDRGVSLTDGYLMNVGKSLPNHATGIQGHAEVLEVNYAIHVCRGVVFQPVFEY
CEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHH
YFNPNAQSNLRNATLLGFKSHIEIL
HCCCCCCCCCCCEEEEEECCCEECC
>Mature Secondary Structure
MVRLFLSTQRSVAPSMRFLSVRRIDRSFRRGLTACALSTLLPHCIPAAHAQVLDNDIGSA
CEEEEECCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PSIRVSTPLPAAASLTTSVPPFSQPEALFPNPFGLTRYLRDRGINFLFDNTNEFAGALTQ
CCEEECCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCHHHHCCCCC
PTPGFRNYRQGASNAGQYANELDINWEKLAGLAGFATHVITVGRYGTTANRMFGDWLDHA
CCCCHHHHHHCCCHHHCCHHHCCCCHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHC
SEDYGGGGNVAVHLVLAYGEETLFGGRLAIAAGRIPLASDFAASPLFCNFMNGSMCGRPK
CCCCCCCCCEEEEEEEEECCCEEECCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCC
GITDSNYMPGYPASTWGFRVRGRPTRATYIQTGVYPMENGVYAVAQHRTGFKFNGSNILG
CCCCCCCCCCCCCCCCCEEECCCCCCEEEEEECCEECCCCEEEEEECCCCCEECCCEEEE
YTIPVETGWEPVFGHGTLPGHYKVGAAALDEPMPDNLFDNDGRPYALSGRAPRMHSAGWE
EEEECCCCCCEECCCCCCCCCEECCHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCH
SWAMFDQRLYHPKGGGKDAGITMLTGITYNDPHTSLRNYVGYVAFLDRGFWPSRPFDTIG
HHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCHHHHC
AAFTYTKIDRGVSLTDGYLMNVGKSLPNHATGIQGHAEVLEVNYAIHVCRGVVFQPVFEY
CEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHH
YFNPNAQSNLRNATLLGFKSHIEIL
HCCCCCCCCCCCEEEEEECCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8125108; 10984043; 2450582; 8132494; 7768797 [H]