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The map label for this gene is yphA [H]

Identifier: 162149245

GI number: 162149245

Start: 3575889

End: 3576371

Strand: Direct

Name: yphA [H]

Synonym: GDI_3477

Alternate gene names: 162149245

Gene position: 3575889-3576371 (Clockwise)

Preceding gene: 162149244

Following gene: 162149246

Centisome position: 90.66

GC content: 63.15

Gene sequence:

>483_bases
GTGCTTCGGCCTCGCCGTCTCCGACCACCCACGAACGCACAAGGATCTCACATCATGAACCAGTTTCCGTCCCGCGACAT
TGCCCTGCTTGCCGCACGCTTTGCGCTCTCCCTGCTGTTCCTCGTCATGGGATGGGGCAAGCTCTCGGATTATGCCGGCA
CGGTCGCCTATATGACACAGACCGGCGCGCCGCTTCCGGGCGTGTCCGCCATTATCGCCATCCTCGCCGAACTGGGAATC
GGGGTCGCGCTCGTGGCAGGCATCCTGGTGACGCCGCTGTCGATCGCGCTGGCGATCTACACTGTCGTGACGGCTTTCAT
CGGGCACCATTTCTGGACGATGGACGGAATGCTTCGCTACGACATGACCATCCATTTCTACAAGAATATCAGCATCGCCG
GCGGTCTCCTGGCCCTTGCCGCTGCCGGCCCCGGGCGTTTCACCCTGCGCCTGTCCAGACGCGAAGCCGTGACCGCCGCG
TGA

Upstream 100 bases:

>100_bases
GGCACGTCCGCATGACTGATTAAAGGAAACAATGAGTTTCCATTGTTTCTATTTTTACGATCCCGGTAGCGTCATAACGT
GTGTGCAACGGCGGTGAACA

Downstream 100 bases:

>100_bases
CCGTTCCCGCTTCCGTGGATTTACCAAGGATAATGATCATGTCGCATTTCACGACGACCGACGGTGCGGAAATCTACTTC
AAGGACTGGGGCAAGGGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MLRPRRLRPPTNAQGSHIMNQFPSRDIALLAARFALSLLFLVMGWGKLSDYAGTVAYMTQTGAPLPGVSAIIAILAELGI
GVALVAGILVTPLSIALAIYTVVTAFIGHHFWTMDGMLRYDMTIHFYKNISIAGGLLALAAAGPGRFTLRLSRREAVTAA

Sequences:

>Translated_160_residues
MLRPRRLRPPTNAQGSHIMNQFPSRDIALLAARFALSLLFLVMGWGKLSDYAGTVAYMTQTGAPLPGVSAIIAILAELGI
GVALVAGILVTPLSIALAIYTVVTAFIGHHFWTMDGMLRYDMTIHFYKNISIAGGLLALAAAGPGRFTLRLSRREAVTAA
>Mature_160_residues
MLRPRRLRPPTNAQGSHIMNQFPSRDIALLAARFALSLLFLVMGWGKLSDYAGTVAYMTQTGAPLPGVSAIIAILAELGI
GVALVAGILVTPLSIALAIYTVVTAFIGHHFWTMDGMLRYDMTIHFYKNISIAGGLLALAAAGPGRFTLRLSRREAVTAA

Specific function: Unknown

COG id: COG2259

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the doxX family [H]

Homologues:

Organism=Escherichia coli, GI145693171, Length=131, Percent_Identity=42.7480916030534, Blast_Score=104, Evalue=3e-24,
Organism=Escherichia coli, GI87082210, Length=132, Percent_Identity=36.3636363636364, Blast_Score=77, Evalue=8e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011637 [H]

Pfam domain/function: PF07681 DoxX [H]

EC number: NA

Molecular weight: Translated: 17124; Mature: 17124

Theoretical pI: Translated: 11.00; Mature: 11.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRPRRLRPPTNAQGSHIMNQFPSRDIALLAARFALSLLFLVMGWGKLSDYAGTVAYMTQ
CCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHCC
TGAPLPGVSAIIAILAELGIGVALVAGILVTPLSIALAIYTVVTAFIGHHFWTMDGMLRY
CCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
DMTIHFYKNISIAGGLLALAAAGPGRFTLRLSRREAVTAA
EEEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCHHCCCC
>Mature Secondary Structure
MLRPRRLRPPTNAQGSHIMNQFPSRDIALLAARFALSLLFLVMGWGKLSDYAGTVAYMTQ
CCCCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHCC
TGAPLPGVSAIIAILAELGIGVALVAGILVTPLSIALAIYTVVTAFIGHHFWTMDGMLRY
CCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE
DMTIHFYKNISIAGGLLALAAAGPGRFTLRLSRREAVTAA
EEEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]