Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
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Accession | NC_010125 |
Length | 3,944,163 |
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The map label for this gene is gpmI [H]
Identifier: 162149117
GI number: 162149117
Start: 3439941
End: 3441491
Strand: Direct
Name: gpmI [H]
Synonym: GDI_3347
Alternate gene names: 162149117
Gene position: 3439941-3441491 (Clockwise)
Preceding gene: 162149113
Following gene: 162149118
Centisome position: 87.22
GC content: 68.15
Gene sequence:
>1551_bases ATGACCACCCAGACGCACCTGCATCCCCGACGCCCGGTCATGCTCGTCATCCTCGACGGGTTCGGCTGGCGCGACGACCC GACGGACAACGCCGTCCGCGCGGCCCATACCCCTGCCTTCGACCGCCTGTGGCAGGAAGGCCCGCACGCCTTCCTGAAGA CATGTGGCGAGGATGTCGGCCTGCCGGAAGGGCAGATGGGAAATTCCGAGGTCGGGCACCTGAATATCGGCGCCGGCCGC GTGGTCATGCAGGAACTGCCGCGCATCTTCGCCGCCATCCGTGACGGCAGCCTGGCCGCCAATCCGGTCCTGATGGGCCT GGTCGCAACCCTGAAGCAGAGCGGCGGCACCTGCCACCTGATGGGCCTGGTCTCGCCGGGCGGCGTGCATTCCCACCAGG ACCATGCCGTGGCGCTGGCGAAGATCCTGGCCGACCAGGGGGTTCCGGTCGCCTTCCATGCCTTCACCGACGGGCGCGAC ACGCCGCCGCATTCCGGCCGCGAGTACGTGGCCAGCCTGCGCGCCGCCCTGCCGGACGCCGTGTCCATCGCCACGATGTC CGGCCGTTACTACGCCATGGACCGCGACCGCCGCTGGGACCGGGTGGAAAAGGCCTATGACGCCATCGTTTCGGCCCAGG GGCCGCATGGCGAGGACCCGCTCGCGGTGCTGGATGCGGCCTACAAGGCCGGAACCACGGACGAATTCCTGCCCCCGACC GTGCTGGGCACCTATGGGGGGATGAAGGACGGCGACGCCATCCTGTCCTTCAATTTCCGCGCCGATCGCATCCGCCAGCT TTTCGACGCGCTGCTGGAGAAGAATTTCGAGGGCTTCGCCCGCTCGCGCGTCATCCGGTTCTCCGCCGCCGTCGGCATGA CGCGCTACAGCGACCGGCTGGCGGAGCTGATCGGGGTGCTGTTCCCGCCCGAGACGCTGGACGACCTGCTGGGCGAGGTG GTGTCGAAGGCCGGCCTGCACCAGTTGCGCATGGCCGAGACCGAGAAATACCCCCACGTCACCTACTTCCTCAACGGCGG CAAGGAAGCCCAGCTTCCGGGCGAGGACCGGATCATGGTGCCCTCGCCCAAGGTCGCGACCTATGACCTGCAGCCGGAAA TGTCCGCCCCCGAACTGACCGACAAGGCGGTGGCGGCGATCGAAAGCGGCAAGTACGACCTGATCGTCCTGAATTACGCC AACGCCGACATGGTGGGCCATACCGGCGTGTTCGGTGCCGCCGTCAAGGCGATCGAGGCGGTGGATCGCGGCCTGAAACG CCTGGTGGAAGCGGTGCACCGCCAGCGCGGCGCACTGCTGGTCACGGCCGATCACGGCAATGCCGAAACCATGTTCGACG CCAAGACCGGCGGCCCGCACACCGCCCACACGCTGAACGTCGTGCCGGTGGTGCTGACCGGCGTGCGCGAGATGACGCTG CATGACGGCCGCCTGTCCGACCTGGCGCCCACCCTGCTGGCCCTGATGGGCCTGCCGCAGCCCGCCGCCATGACCGGGAC GTCGCTGCTGGTCGAAAAACACCGTTTTTAA
Upstream 100 bases:
>100_bases CGCATTCTCCATTCGGGCGGGCGTCTTTCCGTCGCCGGGACATTCGCAATCCCGAAATTTGATGCCATCATGAACGACAA AATTACGGGAGAGAATACCC
Downstream 100 bases:
>100_bases CTTGAAACGCGCGCTGGTGGCCGGCCTGCTCGCCGGGCTGGCCACCTGGGTCCCGGCCCCCTGGGGGGTCCCGGCCATTG GGGGATCGGCCGATGCCGCC
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-independent PGAM; Phosphoglyceromutase; iPGM [H]
Number of amino acids: Translated: 516; Mature: 515
Protein sequence:
>516_residues MTTQTHLHPRRPVMLVILDGFGWRDDPTDNAVRAAHTPAFDRLWQEGPHAFLKTCGEDVGLPEGQMGNSEVGHLNIGAGR VVMQELPRIFAAIRDGSLAANPVLMGLVATLKQSGGTCHLMGLVSPGGVHSHQDHAVALAKILADQGVPVAFHAFTDGRD TPPHSGREYVASLRAALPDAVSIATMSGRYYAMDRDRRWDRVEKAYDAIVSAQGPHGEDPLAVLDAAYKAGTTDEFLPPT VLGTYGGMKDGDAILSFNFRADRIRQLFDALLEKNFEGFARSRVIRFSAAVGMTRYSDRLAELIGVLFPPETLDDLLGEV VSKAGLHQLRMAETEKYPHVTYFLNGGKEAQLPGEDRIMVPSPKVATYDLQPEMSAPELTDKAVAAIESGKYDLIVLNYA NADMVGHTGVFGAAVKAIEAVDRGLKRLVEAVHRQRGALLVTADHGNAETMFDAKTGGPHTAHTLNVVPVVLTGVREMTL HDGRLSDLAPTLLALMGLPQPAAMTGTSLLVEKHRF
Sequences:
>Translated_516_residues MTTQTHLHPRRPVMLVILDGFGWRDDPTDNAVRAAHTPAFDRLWQEGPHAFLKTCGEDVGLPEGQMGNSEVGHLNIGAGR VVMQELPRIFAAIRDGSLAANPVLMGLVATLKQSGGTCHLMGLVSPGGVHSHQDHAVALAKILADQGVPVAFHAFTDGRD TPPHSGREYVASLRAALPDAVSIATMSGRYYAMDRDRRWDRVEKAYDAIVSAQGPHGEDPLAVLDAAYKAGTTDEFLPPT VLGTYGGMKDGDAILSFNFRADRIRQLFDALLEKNFEGFARSRVIRFSAAVGMTRYSDRLAELIGVLFPPETLDDLLGEV VSKAGLHQLRMAETEKYPHVTYFLNGGKEAQLPGEDRIMVPSPKVATYDLQPEMSAPELTDKAVAAIESGKYDLIVLNYA NADMVGHTGVFGAAVKAIEAVDRGLKRLVEAVHRQRGALLVTADHGNAETMFDAKTGGPHTAHTLNVVPVVLTGVREMTL HDGRLSDLAPTLLALMGLPQPAAMTGTSLLVEKHRF >Mature_515_residues TTQTHLHPRRPVMLVILDGFGWRDDPTDNAVRAAHTPAFDRLWQEGPHAFLKTCGEDVGLPEGQMGNSEVGHLNIGAGRV VMQELPRIFAAIRDGSLAANPVLMGLVATLKQSGGTCHLMGLVSPGGVHSHQDHAVALAKILADQGVPVAFHAFTDGRDT PPHSGREYVASLRAALPDAVSIATMSGRYYAMDRDRRWDRVEKAYDAIVSAQGPHGEDPLAVLDAAYKAGTTDEFLPPTV LGTYGGMKDGDAILSFNFRADRIRQLFDALLEKNFEGFARSRVIRFSAAVGMTRYSDRLAELIGVLFPPETLDDLLGEVV SKAGLHQLRMAETEKYPHVTYFLNGGKEAQLPGEDRIMVPSPKVATYDLQPEMSAPELTDKAVAAIESGKYDLIVLNYAN ADMVGHTGVFGAAVKAIEAVDRGLKRLVEAVHRQRGALLVTADHGNAETMFDAKTGGPHTAHTLNVVPVVLTGVREMTLH DGRLSDLAPTLLALMGLPQPAAMTGTSLLVEKHRF
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG0696
COG function: function code G; Phosphoglyceromutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BPG-independent phosphoglycerate mutase family [H]
Homologues:
Organism=Escherichia coli, GI1790041, Length=515, Percent_Identity=50.0970873786408, Blast_Score=496, Evalue=1e-141, Organism=Caenorhabditis elegans, GI32564249, Length=511, Percent_Identity=45.4011741682975, Blast_Score=411, Evalue=1e-115, Organism=Caenorhabditis elegans, GI17507741, Length=511, Percent_Identity=45.4011741682975, Blast_Score=410, Evalue=1e-115,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR011258 - InterPro: IPR006124 - InterPro: IPR005995 [H]
Pfam domain/function: PF06415 iPGM_N; PF01676 Metalloenzyme [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 55720; Mature: 55589
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTQTHLHPRRPVMLVILDGFGWRDDPTDNAVRAAHTPAFDRLWQEGPHAFLKTCGEDVG CCCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHCCCCHHHHHHHHCCHHHHHHCCHHCC LPEGQMGNSEVGHLNIGAGRVVMQELPRIFAAIRDGSLAANPVLMGLVATLKQSGGTCHL CCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEE MGLVSPGGVHSHQDHAVALAKILADQGVPVAFHAFTDGRDTPPHSGREYVASLRAALPDA EEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCH VSIATMSGRYYAMDRDRRWDRVEKAYDAIVSAQGPHGEDPLAVLDAAYKAGTTDEFLPPT HEEEEECCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCH VLGTYGGMKDGDAILSFNFRADRIRQLFDALLEKNFEGFARSRVIRFSAAVGMTRYSDRL HHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH AELIGVLFPPETLDDLLGEVVSKAGLHQLRMAETEKYPHVTYFLNGGKEAQLPGEDRIMV HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEC PSPKVATYDLQPEMSAPELTDKAVAAIESGKYDLIVLNYANADMVGHTGVFGAAVKAIEA CCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHH VDRGLKRLVEAVHRQRGALLVTADHGNAETMFDAKTGGPHTAHTLNVVPVVLTGVREMTL HHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEECCCCCCCCCCHHHHHHHHHHCHHHHHC HDGRLSDLAPTLLALMGLPQPAAMTGTSLLVEKHRF CCCCHHHHHHHHHHHHCCCCCHHHCCHHHHHCCCCC >Mature Secondary Structure TTQTHLHPRRPVMLVILDGFGWRDDPTDNAVRAAHTPAFDRLWQEGPHAFLKTCGEDVG CCCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHCCCCHHHHHHHHCCHHHHHHCCHHCC LPEGQMGNSEVGHLNIGAGRVVMQELPRIFAAIRDGSLAANPVLMGLVATLKQSGGTCHL CCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEE MGLVSPGGVHSHQDHAVALAKILADQGVPVAFHAFTDGRDTPPHSGREYVASLRAALPDA EEECCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCH VSIATMSGRYYAMDRDRRWDRVEKAYDAIVSAQGPHGEDPLAVLDAAYKAGTTDEFLPPT HEEEEECCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCH VLGTYGGMKDGDAILSFNFRADRIRQLFDALLEKNFEGFARSRVIRFSAAVGMTRYSDRL HHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH AELIGVLFPPETLDDLLGEVVSKAGLHQLRMAETEKYPHVTYFLNGGKEAQLPGEDRIMV HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCEEEC PSPKVATYDLQPEMSAPELTDKAVAAIESGKYDLIVLNYANADMVGHTGVFGAAVKAIEA CCCCEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHH VDRGLKRLVEAVHRQRGALLVTADHGNAETMFDAKTGGPHTAHTLNVVPVVLTGVREMTL HHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEECCCCCCCCCCHHHHHHHHHHCHHHHHC HDGRLSDLAPTLLALMGLPQPAAMTGTSLLVEKHRF CCCCHHHHHHHHHHHHCCCCCHHHCCHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA