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The map label for this gene is cisA [H]

Identifier: 162146770

GI number: 162146770

Start: 967982

End: 969649

Strand: Reverse

Name: cisA [H]

Synonym: GDI_0951

Alternate gene names: 162146770

Gene position: 969649-967982 (Counterclockwise)

Preceding gene: 162146771

Following gene: 162146769

Centisome position: 24.58

GC content: 61.27

Gene sequence:

>1668_bases
ATGGGGATTGTGAAAGTCGCGCTCTACGCCCGCTATTCGTCCGAAAACCAGCGTGACGCCTCGATCGAGGATCAGTTGCG
CCTCTGCCGGCTTCACGCGAAAAAGCAGGGCTGGACGATCGTCGACAGCTACACGGACCGGGCGATCTCGGGTGCCTCCC
TGCTTCGCCCCGGCATACAGGAACTGATCCAGGACGCCACACGCGGCCGCTTCACGATCGTGCTGGCCGAAGCCATGGAC
CGGTTGTCGCGCGACCAGGAAGATATCGCCGGCCTGTTCAAGCGGATGACCTTCTCCGGCGTGCGGATCATCACCCTTTC
CGAGGGCGATGTCACACACCTGCATATCGGCCTCAAGGGTACGATGAACGCCCTGTTCCTTAAGGATCTCGCCGAGAAGG
TGCGCCGTGGTCTGCGCGGACGCGTCGAGGACGGCAAGTCCGGCGGTGGCAATTCCTATGGCTATGACGTTGTGCGCCAG
TTTGACGCGAAGGGTGAGCGCATTCGCGGCGACCGGACCATCAACGAGGAAGAAGCCCGCACGATCAGACGGATCTTCAC
CGATTACACGCGCGGCAAGTCCTCACGCACGATCGCGATGGAACTGAACCGGGACGGCGTTCCGGGTCCGCAGGGACGTG
AATGGGGACCATCCACCATTCACGGCAATCGGGAACGCGGCACCGGCGTCCTCAACAACGAGATGTATGTGGGCAAGCTG
GTGTGGAACCGGCTGCGCTATCTGAAAGACCCCGATACCGGCAAGCGCGTCTCACGCCTCAATCCTGAATCCGAATGGGT
GATCCAGGAGGTGCCCGAGTTGCGGATCGTCGAGCAGGATCTGTGGGATGCCGTGAAGGCGCGCCAAGCTGAGACAACCT
TCAGCCAGCCGGAACGGGGAAATGAGGCCCTCAGTGAGCGGCGGCGTCCCCGCCACCTCTTTGCCGGGCTCATCCGCTGC
GGCTGCTGTGGCGGTGGCTACAGCATGATCTCGAAAGATCTTCTCGGCTGCTCGACAGCACGCAACAAGGGCACATGCGA
TAACCGGCTCAACATCCGTCGCGACGCGCTGGAAGCATCAGTCCTGAGCGGATTACGCACGCACCTGATGGAACCTGATC
TGTTCAAGGAATTCTGCAACGAGTTCACCCGCGAGGTGAACAGGCTTCGGATGGAACACGGTGCCGATCTTGTCGCCATG
CGGGCAGAACTGCCCCGCATCGATCGGGAGCTGGCAAAACTTCTAACCGCGCTCAAGGCTGGTGGACCAATCCAGGCAAT
CGTCGACGACATGAAGCGGTTGGAAGCACGCAAGGCCGAAGTGACAGAGCGTCTTGCTAATACTGAGGAGCCGCCTCCCC
TTCTCCATCCGAACATGGCGGAGATCTACCAGCAGCGGATCGCGTCTCTCTATGAGAGTCTTCAGGCCGAAGACACGAAG
ACCGAGGCGGCCGAGCGCCTGCGCACGCTCGTCTCGCAGATCACGCTCCAACCGGCCGACGGCGAACTGGCGATCGTCCT
GCGCGGCGACCTGGCTGCGATCCTGCAGTTCGCGGCGCACAAGAAAAACGCCACGGCCCATCCGGACAGTGGCGTTCTCG
ATGCGTTCGTATCGCAAGTATCGTTGGTTGCGGGGACAGGATTTGAACCTGTGACCTTCAGGTTATGA

Upstream 100 bases:

>100_bases
CTGGTCAGTCTGGTCCGGCTTCTGGCCCGTCAGGCCGCACGGGATTTCGTCAACGCTGAAGTGGAGGCCGCGAAGCGACG
CGATCTCCAGGAGTAGGGAG

Downstream 100 bases:

>100_bases
GCCTGACGAGCTACCGGGCTGCTCCACCCCGCGCTGGTGTGGTGTGTGTGTTGTGAGGGGTGGACTGGAAGACCTGGCGG
CGACCGACTTTCCCGCGTCT

Product: DNA recombinase

Products: NA

Alternate protein names: Stage IV sporulation protein CA [H]

Number of amino acids: Translated: 555; Mature: 554

Protein sequence:

>555_residues
MGIVKVALYARYSSENQRDASIEDQLRLCRLHAKKQGWTIVDSYTDRAISGASLLRPGIQELIQDATRGRFTIVLAEAMD
RLSRDQEDIAGLFKRMTFSGVRIITLSEGDVTHLHIGLKGTMNALFLKDLAEKVRRGLRGRVEDGKSGGGNSYGYDVVRQ
FDAKGERIRGDRTINEEEARTIRRIFTDYTRGKSSRTIAMELNRDGVPGPQGREWGPSTIHGNRERGTGVLNNEMYVGKL
VWNRLRYLKDPDTGKRVSRLNPESEWVIQEVPELRIVEQDLWDAVKARQAETTFSQPERGNEALSERRRPRHLFAGLIRC
GCCGGGYSMISKDLLGCSTARNKGTCDNRLNIRRDALEASVLSGLRTHLMEPDLFKEFCNEFTREVNRLRMEHGADLVAM
RAELPRIDRELAKLLTALKAGGPIQAIVDDMKRLEARKAEVTERLANTEEPPPLLHPNMAEIYQQRIASLYESLQAEDTK
TEAAERLRTLVSQITLQPADGELAIVLRGDLAAILQFAAHKKNATAHPDSGVLDAFVSQVSLVAGTGFEPVTFRL

Sequences:

>Translated_555_residues
MGIVKVALYARYSSENQRDASIEDQLRLCRLHAKKQGWTIVDSYTDRAISGASLLRPGIQELIQDATRGRFTIVLAEAMD
RLSRDQEDIAGLFKRMTFSGVRIITLSEGDVTHLHIGLKGTMNALFLKDLAEKVRRGLRGRVEDGKSGGGNSYGYDVVRQ
FDAKGERIRGDRTINEEEARTIRRIFTDYTRGKSSRTIAMELNRDGVPGPQGREWGPSTIHGNRERGTGVLNNEMYVGKL
VWNRLRYLKDPDTGKRVSRLNPESEWVIQEVPELRIVEQDLWDAVKARQAETTFSQPERGNEALSERRRPRHLFAGLIRC
GCCGGGYSMISKDLLGCSTARNKGTCDNRLNIRRDALEASVLSGLRTHLMEPDLFKEFCNEFTREVNRLRMEHGADLVAM
RAELPRIDRELAKLLTALKAGGPIQAIVDDMKRLEARKAEVTERLANTEEPPPLLHPNMAEIYQQRIASLYESLQAEDTK
TEAAERLRTLVSQITLQPADGELAIVLRGDLAAILQFAAHKKNATAHPDSGVLDAFVSQVSLVAGTGFEPVTFRL
>Mature_554_residues
GIVKVALYARYSSENQRDASIEDQLRLCRLHAKKQGWTIVDSYTDRAISGASLLRPGIQELIQDATRGRFTIVLAEAMDR
LSRDQEDIAGLFKRMTFSGVRIITLSEGDVTHLHIGLKGTMNALFLKDLAEKVRRGLRGRVEDGKSGGGNSYGYDVVRQF
DAKGERIRGDRTINEEEARTIRRIFTDYTRGKSSRTIAMELNRDGVPGPQGREWGPSTIHGNRERGTGVLNNEMYVGKLV
WNRLRYLKDPDTGKRVSRLNPESEWVIQEVPELRIVEQDLWDAVKARQAETTFSQPERGNEALSERRRPRHLFAGLIRCG
CCGGGYSMISKDLLGCSTARNKGTCDNRLNIRRDALEASVLSGLRTHLMEPDLFKEFCNEFTREVNRLRMEHGADLVAMR
AELPRIDRELAKLLTALKAGGPIQAIVDDMKRLEARKAEVTERLANTEEPPPLLHPNMAEIYQQRIASLYESLQAEDTKT
EAAERLRTLVSQITLQPADGELAIVLRGDLAAILQFAAHKKNATAHPDSGVLDAFVSQVSLVAGTGFEPVTFRL

Specific function: Putative site-specific recombinase having a very important role in sporulation. It probably plays a role in the recombination of spoIIIC and spoIVCB to form sigma K factor [H]

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 recombinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011109
- InterPro:   IPR006118
- InterPro:   IPR006119 [H]

Pfam domain/function: PF07508 Recombinase; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 62193; Mature: 62062

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIVKVALYARYSSENQRDASIEDQLRLCRLHAKKQGWTIVDSYTDRAISGASLLRPGIQ
CCCEEEEHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHCCHHHHHHHHH
ELIQDATRGRFTIVLAEAMDRLSRDQEDIAGLFKRMTFSGVRIITLSEGDVTHLHIGLKG
HHHHHHHCCEEEEEHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEECCCCEEEEEEECHH
TMNALFLKDLAEKVRRGLRGRVEDGKSGGGNSYGYDVVRQFDAKGERIRGDRTINEEEAR
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEECCCCCCCHHHHH
TIRRIFTDYTRGKSSRTIAMELNRDGVPGPQGREWGPSTIHGNRERGTGVLNNEMYVGKL
HHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHH
VWNRLRYLKDPDTGKRVSRLNPESEWVIQEVPELRIVEQDLWDAVKARQAETTFSQPERG
HHHHHHHCCCCCCCCHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
NEALSERRRPRHLFAGLIRCGCCGGGYSMISKDLLGCSTARNKGTCDNRLNIRRDALEAS
HHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
VLSGLRTHLMEPDLFKEFCNEFTREVNRLRMEHGADLVAMRAELPRIDRELAKLLTALKA
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHCCHHHHHHHHHHHHHHC
GGPIQAIVDDMKRLEARKAEVTERLANTEEPPPLLHPNMAEIYQQRIASLYESLQAEDTK
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHH
TEAAERLRTLVSQITLQPADGELAIVLRGDLAAILQFAAHKKNATAHPDSGVLDAFVSQV
HHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
SLVAGTGFEPVTFRL
HHHHCCCCCCEEEEC
>Mature Secondary Structure 
GIVKVALYARYSSENQRDASIEDQLRLCRLHAKKQGWTIVDSYTDRAISGASLLRPGIQ
CCEEEEHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHCCHHHHHHHHH
ELIQDATRGRFTIVLAEAMDRLSRDQEDIAGLFKRMTFSGVRIITLSEGDVTHLHIGLKG
HHHHHHHCCEEEEEHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEECCCCEEEEEEECHH
TMNALFLKDLAEKVRRGLRGRVEDGKSGGGNSYGYDVVRQFDAKGERIRGDRTINEEEAR
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEECCCCCCCHHHHH
TIRRIFTDYTRGKSSRTIAMELNRDGVPGPQGREWGPSTIHGNRERGTGVLNNEMYVGKL
HHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHH
VWNRLRYLKDPDTGKRVSRLNPESEWVIQEVPELRIVEQDLWDAVKARQAETTFSQPERG
HHHHHHHCCCCCCCCHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
NEALSERRRPRHLFAGLIRCGCCGGGYSMISKDLLGCSTARNKGTCDNRLNIRRDALEAS
HHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
VLSGLRTHLMEPDLFKEFCNEFTREVNRLRMEHGADLVAMRAELPRIDRELAKLLTALKA
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHCCHHHHHHHHHHHHHHC
GGPIQAIVDDMKRLEARKAEVTERLANTEEPPPLLHPNMAEIYQQRIASLYESLQAEDTK
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHH
TEAAERLRTLVSQITLQPADGELAIVLRGDLAAILQFAAHKKNATAHPDSGVLDAFVSQV
HHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
SLVAGTGFEPVTFRL
HHHHCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2105293; 7704261; 8969508; 9384377 [H]