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The map label for this gene is qmcA [H]

Identifier: 161871032

GI number: 161871032

Start: 1085859

End: 1086494

Strand: Reverse

Name: qmcA [H]

Synonym: NMCC_1100

Alternate gene names: 161871032

Gene position: 1086494-1085859 (Counterclockwise)

Preceding gene: 161870065

Following gene: 161870062

Centisome position: 50.45

GC content: 53.14

Gene sequence:

>636_bases
ATGGCGATTACCCAGCTTGCCCAAACGACGCTGCGTTCCGTTATCGGACGTATGGAGTTGGACAAAACGTTTGAAGAACG
CGACGAAATCAACAGTACTGTTGTTGCGGCTTTGGACGAGGCGGCCGGGGCTTGGGGTGTGAAGGTTTTGCGTTATGAGA
TTAAAGACTTGGTGCCGCCGCAAGAAATCCTTCGCTCAATGCAGGCGCAAATTACTGCCGAACGCGAAAAACGCGCCCGT
ATCGCCGAATCCGAAGGTCGTAAAATCGAACAAATCAACCTTGCCAGTGGTCAGCGCGAAGCCGAAATCCAACAATCCGA
AGGCGAGGCTCAGGCTGCGGTCAATGCGTCAAATGCCGAAAAAATCGCCCGCATCAACCGCGCCAAAGGTGAAGCGGAAT
CCTTGCGCCTTGTTGCCGAAGCCAATGCCGAAGCCATCCGTCAAATTGCCGCCGCCCTTCAAACCCAAGGCGGTGCGGAT
GCGGTCAATCTGAAGATTGCGGAACAATACGTCGCCGCGTTCAACAATCTTGCCAAAGAAAGCAATACGCTGATTATGCC
CGCCAATGTTGCCGACATCGGCAGCCTGATTTCTGCCGGTATGAAAATTATCGACAGCAGCAAAACCGCCAAATAA

Upstream 100 bases:

>100_bases
CTGCATCACGCGCGACAATACGCAGCTGACTGTTGACGGTATCATCTATTTCCAAGTAACCGACCCCAAACTCGCCTCAT
ACGGTTCGAGCAACTACATT

Downstream 100 bases:

>100_bases
GCCGTGATGAAATGCCGTCTGAAGCTCTGTTTTCGGGGTTCAGACGGCATTTTTATTTAAACTCGGGCAGGGTTGTATTC
CGCTTCAAATATAGTGGATT

Product: stomatin/Mec-2 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 210

Protein sequence:

>211_residues
MAITQLAQTTLRSVIGRMELDKTFEERDEINSTVVAALDEAAGAWGVKVLRYEIKDLVPPQEILRSMQAQITAEREKRAR
IAESEGRKIEQINLASGQREAEIQQSEGEAQAAVNASNAEKIARINRAKGEAESLRLVAEANAEAIRQIAAALQTQGGAD
AVNLKIAEQYVAAFNNLAKESNTLIMPANVADIGSLISAGMKIIDSSKTAK

Sequences:

>Translated_211_residues
MAITQLAQTTLRSVIGRMELDKTFEERDEINSTVVAALDEAAGAWGVKVLRYEIKDLVPPQEILRSMQAQITAEREKRAR
IAESEGRKIEQINLASGQREAEIQQSEGEAQAAVNASNAEKIARINRAKGEAESLRLVAEANAEAIRQIAAALQTQGGAD
AVNLKIAEQYVAAFNNLAKESNTLIMPANVADIGSLISAGMKIIDSSKTAK
>Mature_210_residues
AITQLAQTTLRSVIGRMELDKTFEERDEINSTVVAALDEAAGAWGVKVLRYEIKDLVPPQEILRSMQAQITAEREKRARI
AESEGRKIEQINLASGQREAEIQQSEGEAQAAVNASNAEKIARINRAKGEAESLRLVAEANAEAIRQIAAALQTQGGADA
VNLKIAEQYVAAFNNLAKESNTLIMPANVADIGSLISAGMKIIDSSKTAK

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI7305503, Length=202, Percent_Identity=47.5247524752475, Blast_Score=174, Evalue=6e-44,
Organism=Escherichia coli, GI1786697, Length=189, Percent_Identity=38.6243386243386, Blast_Score=122, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI32564147, Length=211, Percent_Identity=48.3412322274881, Blast_Score=196, Evalue=8e-51,
Organism=Caenorhabditis elegans, GI17570459, Length=83, Percent_Identity=43.3734939759036, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17569493, Length=124, Percent_Identity=34.6774193548387, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI193209764, Length=124, Percent_Identity=34.6774193548387, Blast_Score=64, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI71989948, Length=62, Percent_Identity=51.6129032258064, Blast_Score=63, Evalue=9e-11,
Organism=Drosophila melanogaster, GI45550506, Length=205, Percent_Identity=41.9512195121951, Blast_Score=158, Evalue=2e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 22743; Mature: 22612

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAITQLAQTTLRSVIGRMELDKTFEERDEINSTVVAALDEAAGAWGVKVLRYEIKDLVPP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCH
QEILRSMQAQITAEREKRARIAESEGRKIEQINLASGQREAEIQQSEGEAQAAVNASNAE
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHCCCHHHHHHCCCHHH
KIARINRAKGEAESLRLVAEANAEAIRQIAAALQTQGGADAVNLKIAEQYVAAFNNLAKE
HHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHC
SNTLIMPANVADIGSLISAGMKIIDSSKTAK
CCCEEECCCHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AITQLAQTTLRSVIGRMELDKTFEERDEINSTVVAALDEAAGAWGVKVLRYEIKDLVPP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCH
QEILRSMQAQITAEREKRARIAESEGRKIEQINLASGQREAEIQQSEGEAQAAVNASNAE
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHCCCHHHHHHCCCHHH
KIARINRAKGEAESLRLVAEANAEAIRQIAAALQTQGGADAVNLKIAEQYVAAFNNLAKE
HHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHC
SNTLIMPANVADIGSLISAGMKIIDSSKTAK
CCCEEECCCHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]