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The map label for this gene is yraP [C]

Identifier: 161870961

GI number: 161870961

Start: 2094661

End: 2095269

Strand: Direct

Name: yraP [C]

Synonym: NMCC_2056

Alternate gene names: 161870961

Gene position: 2094661-2095269 (Clockwise)

Preceding gene: 161870960

Following gene: 161870962

Centisome position: 97.27

GC content: 59.93

Gene sequence:

>609_bases
ATGAAACCCAAACCGCACACCGTCCGCACCCTGATTGCCGCCATTTTCAGCCTTGCCCTTAGCGGCTGCGTCAGCGCAGT
AATCGGAAGCGCCGCCGTCGGCGCGAAATCCGCCGTCGACCGCCGCACCACCGGCGCGCAAACCGACGACAACGTAATGG
CGTTGCGTATTGAAACCACCGCCCGCTCCTACCTACGCCAAAACAACCAAACCAAGGGCTACACGCCCCAAATCTCCGTC
GTCGGCTACAACCGCCACCTGCTGCTGCTCGGACAAGTCGCCACCGAAGGCGAAAAACAGTTCGTCGGTCAGATTGCACG
TTCCGAACAGGCCGCCGAAGGCGTGTACAACTACATTACCGTCGCCTCCCTGCCGCGCACTGCCGGCGACATCGCCGGCG
ACACTTGGAACACATCCAAAGTCCGCGCCACGCTGTTGGGCATCAGCCCCGCCACACAGGCGCGCGTCAAAATCGTTACC
TACGGCAACGTAACCTACGTTATGGGCATCCTCACCCCCGAAGAACAGGCGCAGATTACCCAAAAAGTCAGCACCACCGT
CGGCGTACAAAAAGTCATCACCCTCTACCAAAACTACGTCCAACGCTGA

Upstream 100 bases:

>100_bases
CGACTGTATCGACTCCGTACTGCTGGAAGGAATGTAACCCTTTTCAGACGGCATGGCGCAAAGCAATGCCGTCTGAAACG
CCCAAGAAAGGAAGCACCCG

Downstream 100 bases:

>100_bases
CTCGGCAATGCCGTCTGAACCGCCTTCAGACGGCATTGCCCGACACCCCCAAAGCACAATCAAAATGGCAAAAAAACCGA
ACAAACCCTTCAGGCTGACC

Product: hemolysin, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MKPKPHTVRTLIAAIFSLALSGCVSAVIGSAAVGAKSAVDRRTTGAQTDDNVMALRIETTARSYLRQNNQTKGYTPQISV
VGYNRHLLLLGQVATEGEKQFVGQIARSEQAAEGVYNYITVASLPRTAGDIAGDTWNTSKVRATLLGISPATQARVKIVT
YGNVTYVMGILTPEEQAQITQKVSTTVGVQKVITLYQNYVQR

Sequences:

>Translated_202_residues
MKPKPHTVRTLIAAIFSLALSGCVSAVIGSAAVGAKSAVDRRTTGAQTDDNVMALRIETTARSYLRQNNQTKGYTPQISV
VGYNRHLLLLGQVATEGEKQFVGQIARSEQAAEGVYNYITVASLPRTAGDIAGDTWNTSKVRATLLGISPATQARVKIVT
YGNVTYVMGILTPEEQAQITQKVSTTVGVQKVITLYQNYVQR
>Mature_202_residues
MKPKPHTVRTLIAAIFSLALSGCVSAVIGSAAVGAKSAVDRRTTGAQTDDNVMALRIETTARSYLRQNNQTKGYTPQISV
VGYNRHLLLLGQVATEGEKQFVGQIARSEQAAEGVYNYITVASLPRTAGDIAGDTWNTSKVRATLLGISPATQARVKIVT
YGNVTYVMGILTPEEQAQITQKVSTTVGVQKVITLYQNYVQR

Specific function: Unknown

COG id: COG2823

COG function: function code R; Predicted periplasmic or secreted lipoprotein

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 BON domains [H]

Homologues:

Organism=Escherichia coli, GI1789540, Length=183, Percent_Identity=32.2404371584699, Blast_Score=71, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007055
- InterPro:   IPR014004 [H]

Pfam domain/function: PF04972 BON [H]

EC number: NA

Molecular weight: Translated: 21746; Mature: 21746

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50914 BON

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPKPHTVRTLIAAIFSLALSGCVSAVIGSAAVGAKSAVDRRTTGAQTDDNVMALRIETT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCEEEEEEEHH
ARSYLRQNNQTKGYTPQISVVGYNRHLLLLGQVATEGEKQFVGQIARSEQAAEGVYNYIT
HHHHHHCCCCCCCCCCEEEEEECCCEEEEEECHHCCHHHHHHHHHHHHHHHHHHHHHHHH
VASLPRTAGDIAGDTWNTSKVRATLLGISPATQARVKIVTYGNVTYVMGILTPEEQAQIT
HHCCCCCHHHCCCCCCCCHHEEEEEEECCCCCCCEEEEEEECCEEEEEEECCCHHHHHHH
QKVSTTVGVQKVITLYQNYVQR
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKPKPHTVRTLIAAIFSLALSGCVSAVIGSAAVGAKSAVDRRTTGAQTDDNVMALRIETT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCEEEEEEEHH
ARSYLRQNNQTKGYTPQISVVGYNRHLLLLGQVATEGEKQFVGQIARSEQAAEGVYNYIT
HHHHHHCCCCCCCCCCEEEEEECCCEEEEEECHHCCHHHHHHHHHHHHHHHHHHHHHHHH
VASLPRTAGDIAGDTWNTSKVRATLLGISPATQARVKIVTYGNVTYVMGILTPEEQAQIT
HHCCCCCHHHCCCCCCCCHHEEEEEEECCCCCCCEEEEEEECCEEEEEEECCCHHHHHHH
QKVSTTVGVQKVITLYQNYVQR
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]