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The map label for this gene is yraN [C]

Identifier: 161870959

GI number: 161870959

Start: 2093652

End: 2093999

Strand: Direct

Name: yraN [C]

Synonym: NMCC_2054

Alternate gene names: 161870959

Gene position: 2093652-2093999 (Clockwise)

Preceding gene: 161870955

Following gene: 161870960

Centisome position: 97.22

GC content: 51.15

Gene sequence:

>348_bases
ATGCGCCTAAACCACAAACAGGGCGAGGCAGGGGAAGATGCCGCGCTTGCCTTCCTCCAATCCCAAGGCTGCACACTGCT
TGCCCGCAACTGGCACTGCGCCTACGGCGAAATCGACCTGATTGTCAAAAACGGCGGTATGATTCTGTTTGTTGAAGTAA
AATACCGCAAAAATCGGCAATTCGGCGGTGTCGCATACAGCATTTCCCCATCCAAATTATTGAAACTGCAACGAAGTGTA
GAGTATTATCTGCAACAGAACAGGCTGACAAACGTACCGTGCCGCCTCGATGCGGTACTGATTGAAGGAAACCGCCCGCC
CGAGTGGATACAGAATATTACAGGTTGA

Upstream 100 bases:

>100_bases
ATAATGTCCCTCCGACGACGCTGTCGGAGGCTTTCTGCAAATGTTTCTGAAACATAAGAATGCCGTCTGAAAAACAAACA
TTATAAAGGTTAAACCGATT

Downstream 100 bases:

>100_bases
CGATATGACGACATTACAAGAACGCGTTGCCGCCCATTTTGCCGAAAGCATCCGTGCCAAACAGGAAGCCGAAAAAGTAC
TGGTCGAGCCGACCGTACAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MRLNHKQGEAGEDAALAFLQSQGCTLLARNWHCAYGEIDLIVKNGGMILFVEVKYRKNRQFGGVAYSISPSKLLKLQRSV
EYYLQQNRLTNVPCRLDAVLIEGNRPPEWIQNITG

Sequences:

>Translated_115_residues
MRLNHKQGEAGEDAALAFLQSQGCTLLARNWHCAYGEIDLIVKNGGMILFVEVKYRKNRQFGGVAYSISPSKLLKLQRSV
EYYLQQNRLTNVPCRLDAVLIEGNRPPEWIQNITG
>Mature_115_residues
MRLNHKQGEAGEDAALAFLQSQGCTLLARNWHCAYGEIDLIVKNGGMILFVEVKYRKNRQFGGVAYSISPSKLLKLQRSV
EYYLQQNRLTNVPCRLDAVLIEGNRPPEWIQNITG

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family [H]

Homologues:

Organism=Escherichia coli, GI1789538, Length=113, Percent_Identity=38.0530973451327, Blast_Score=72, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509 [H]

Pfam domain/function: PF02021 UPF0102 [H]

EC number: NA

Molecular weight: Translated: 13036; Mature: 13036

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLNHKQGEAGEDAALAFLQSQGCTLLARNWHCAYGEIDLIVKNGGMILFVEVKYRKNRQ
CCCCCCCCCCCCHHHEEEECCCCCEEEECCEEEECCEEEEEEECCCEEEEEEEEECCCCC
FGGVAYSISPSKLLKLQRSVEYYLQQNRLTNVPCRLDAVLIEGNRPPEWIQNITG
CCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCHHHHHCCCC
>Mature Secondary Structure
MRLNHKQGEAGEDAALAFLQSQGCTLLARNWHCAYGEIDLIVKNGGMILFVEVKYRKNRQ
CCCCCCCCCCCCHHHEEEECCCCCEEEECCEEEECCEEEEEEECCCEEEEEEEEECCCCC
FGGVAYSISPSKLLKLQRSVEYYLQQNRLTNVPCRLDAVLIEGNRPPEWIQNITG
CCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA