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The map label for this gene is 161870849

Identifier: 161870849

GI number: 161870849

Start: 1985059

End: 1985931

Strand: Reverse

Name: 161870849

Synonym: NMCC_1932

Alternate gene names: NA

Gene position: 1985931-1985059 (Counterclockwise)

Preceding gene: 161870853

Following gene: 161870848

Centisome position: 92.22

GC content: 56.47

Gene sequence:

>873_bases
ATGGAAATATGGAATATGTTGGACACTTGGCTCGGTGCCGTCCCGATACGTGCGGAGGCGGTCGAATCCGTGGCGGCGGT
TGCGGCTTTGCTGCTGGCGCGCGCCCTTCTGTTGAATATCCACTTCAAACGGCATCCGGATTTCGGCATCGAAAGCAAGC
GGCGGTTTTTGGTTGCCAGCCGCAATATAACGCTGCTTTTGGTGCTGTTTTCGCTGGCATTTATCTGGTCGGCGCAAATC
CAAACGCTGGCTTTGTCGATGTTTGCGGTGGCGGCGGCGGTCGTCGTGGCGACGAAGGAACTGATTATGTGTCTGTCGGG
CAGTATTTTAAGGTCTGCCACCCAGCAATACTCGGTCGGCGACTATATCGAAATCAACGGCCTGCGCGGGCGCGTGGTCG
ACATCAACCTGTTGAACACGCTGATGATGCAGGTCGGTCCGAACCCCTTGGTCGGACAGCTTGCGGGAACCACCGTTTCT
TTCCCCAACAGCCTGTTGTTGAGCCACCCCGTGCGCCGCGACAATATTTTGGGCGACTATGTCATCCATACGGTCGAAAT
CCCCGTTCCCATCCATTTGGATTCGGATGAAGCCGTATGCCGTCTGAAAGCCGTACTCGAGCCCTTGTGCGCGCCCTACA
TCCCCGCCATCCAACGGCATTTGGAAAACGTGCAGGCGGAAAAACTGTTTATCACGCCCGCCGCCAGACCGCGCGTTACC
CGCGTGCCGTACGATGACAAGGCATACCGCATCATCGTCCGCTTCGCCTCCCCCGTTTCAAAGCGGCTGGAAATCCAACA
GGCGGTTATGGACGAATTTTTGCGCGTACAATACCGCCTGTTAAATTACCCCGCCGGCTCCGAAACACTTTAA

Upstream 100 bases:

>100_bases
TTGCCTCCGGCATCAGGTCGGGGATTGTCCCGTAAAGTGGCAAAAGCGTTTTTTTGCCACTAAAATCTACACCCTATACT
TTTCGGACAGGGGCGCGGAA

Downstream 100 bases:

>100_bases
CTTTCCCCGACCGACCCCATTTCCGGCTTCAGACGGCATATTGCCGATATGCTGTCTGAAGCACAACACGCAAAGGAAAC
CCATCTTATGACTGACAACG

Product: integral membrane protein

Products: NA

Alternate protein names: Small-Conductance Mechanosensitive Channel; Integral Membrane Protein; Mechanosensitive Ion Channel MscS; Cation Efflux Protein; Membrane Associated Protein; MscS Mechanosensitive Ion Channel Protein; Mechanosensitive Ion Channel Protein MscS; Mechanosensitive Ion Channel

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MEIWNMLDTWLGAVPIRAEAVESVAAVAALLLARALLLNIHFKRHPDFGIESKRRFLVASRNITLLLVLFSLAFIWSAQI
QTLALSMFAVAAAVVVATKELIMCLSGSILRSATQQYSVGDYIEINGLRGRVVDINLLNTLMMQVGPNPLVGQLAGTTVS
FPNSLLLSHPVRRDNILGDYVIHTVEIPVPIHLDSDEAVCRLKAVLEPLCAPYIPAIQRHLENVQAEKLFITPAARPRVT
RVPYDDKAYRIIVRFASPVSKRLEIQQAVMDEFLRVQYRLLNYPAGSETL

Sequences:

>Translated_290_residues
MEIWNMLDTWLGAVPIRAEAVESVAAVAALLLARALLLNIHFKRHPDFGIESKRRFLVASRNITLLLVLFSLAFIWSAQI
QTLALSMFAVAAAVVVATKELIMCLSGSILRSATQQYSVGDYIEINGLRGRVVDINLLNTLMMQVGPNPLVGQLAGTTVS
FPNSLLLSHPVRRDNILGDYVIHTVEIPVPIHLDSDEAVCRLKAVLEPLCAPYIPAIQRHLENVQAEKLFITPAARPRVT
RVPYDDKAYRIIVRFASPVSKRLEIQQAVMDEFLRVQYRLLNYPAGSETL
>Mature_290_residues
MEIWNMLDTWLGAVPIRAEAVESVAAVAALLLARALLLNIHFKRHPDFGIESKRRFLVASRNITLLLVLFSLAFIWSAQI
QTLALSMFAVAAAVVVATKELIMCLSGSILRSATQQYSVGDYIEINGLRGRVVDINLLNTLMMQVGPNPLVGQLAGTTVS
FPNSLLLSHPVRRDNILGDYVIHTVEIPVPIHLDSDEAVCRLKAVLEPLCAPYIPAIQRHLENVQAEKLFITPAARPRVT
RVPYDDKAYRIIVRFASPVSKRLEIQQAVMDEFLRVQYRLLNYPAGSETL

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32289; Mature: 32289

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIWNMLDTWLGAVPIRAEAVESVAAVAALLLARALLLNIHFKRHPDFGIESKRRFLVAS
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEC
RNITLLLVLFSLAFIWSAQIQTLALSMFAVAAAVVVATKELIMCLSGSILRSATQQYSVG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCC
DYIEINGLRGRVVDINLLNTLMMQVGPNPLVGQLAGTTVSFPNSLLLSHPVRRDNILGDY
CEEEEECCCCEEEEHHHHHHHHHHCCCCCCHHHHCCCEECCCCHHHHCCCCCCCCCCCCE
VIHTVEIPVPIHLDSDEAVCRLKAVLEPLCAPYIPAIQRHLENVQAEKLFITPAARPRVT
EEEEEECCEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEECCCCCCCEE
RVPYDDKAYRIIVRFASPVSKRLEIQQAVMDEFLRVQYRLLNYPAGSETL
ECCCCCCCEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MEIWNMLDTWLGAVPIRAEAVESVAAVAALLLARALLLNIHFKRHPDFGIESKRRFLVAS
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEC
RNITLLLVLFSLAFIWSAQIQTLALSMFAVAAAVVVATKELIMCLSGSILRSATQQYSVG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCC
DYIEINGLRGRVVDINLLNTLMMQVGPNPLVGQLAGTTVSFPNSLLLSHPVRRDNILGDY
CEEEEECCCCEEEEHHHHHHHHHHCCCCCCHHHHCCCEECCCCHHHHCCCCCCCCCCCCE
VIHTVEIPVPIHLDSDEAVCRLKAVLEPLCAPYIPAIQRHLENVQAEKLFITPAARPRVT
EEEEEECCEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEECCCCCCCEE
RVPYDDKAYRIIVRFASPVSKRLEIQQAVMDEFLRVQYRLLNYPAGSETL
ECCCCCCCEEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA