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The map label for this gene is ygdH [C]

Identifier: 161870780

GI number: 161870780

Start: 1908157

End: 1908771

Strand: Reverse

Name: ygdH [C]

Synonym: NMCC_1862

Alternate gene names: 161870780

Gene position: 1908771-1908157 (Counterclockwise)

Preceding gene: 161870782

Following gene: 161870779

Centisome position: 88.64

GC content: 59.35

Gene sequence:

>615_bases
GTGCCGGAGCAGGCACGTTATGATGCCGAACGCAGGCAGGCAGACGAAGCATTGGCGGGCGTGTTTCCGGCAGTCAGTAT
CTTCGGCAGCGCGCGCACGCCGCAGAATCATGCGGATTATGCGTTCGCCTGCCGTCTGGCGCGGCGGCTGTCGGATTCGG
GCATTGCCGTCATTTCGGGCGGCGGGCCGGGGATTATGGAGGCGGCAAACAAGGGCGCGTTTGCAGGGAAGTCGGTTTCG
GTGGGGCTGAACATCGTTTTGCCGCACGAGCAGAAACCGAATCCGTATCAGGACATCGCCTTGCGGTTTTCCCGTTTTGC
CGAACGCAAGGCGGTGTTTTTCCGCTATTCCCAAGCATATGTCGTGATGCCGGGCGGCTTCGGGACGCTGGACGAATTGT
TTGAAATCCTGACCTTGGTGCAGACGGGCAAAGTGCCGCCGCGTCCGATTGTTTTGGTCGGAAAGGCGTTTTGGTCGGGC
TTGGCGGAGTGGATAAACGCGCAGCTTTTGGCGCGCGGTCTGATTTCCGAAGGGGCAGCCTCTTTGTTCGCCATATCGGA
CGATGAAGACGAAATCGTTGAGTATCTGTCGGAACACGGGCTTCAGACGGCATAG

Upstream 100 bases:

>100_bases
CTTCGTCGCCTTGTCCTGATTTTTGTTAATCCACTATACGTTTTTGACGGTGTACAATCGCTGTTTTTGAACGGAGGATG
GAATGGAGAATACAAACCGT

Downstream 100 bases:

>100_bases
CGTCCTGAGAGTGATGTATAATTGCAAACAATTTAACAATTTTTGATGTCTTTCCCGAACAGGATGCCGAAATGATCAAC
CCCATCGCCTCGCTTTCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 204; Mature: 203

Protein sequence:

>204_residues
MPEQARYDAERRQADEALAGVFPAVSIFGSARTPQNHADYAFACRLARRLSDSGIAVISGGGPGIMEAANKGAFAGKSVS
VGLNIVLPHEQKPNPYQDIALRFSRFAERKAVFFRYSQAYVVMPGGFGTLDELFEILTLVQTGKVPPRPIVLVGKAFWSG
LAEWINAQLLARGLISEGAASLFAISDDEDEIVEYLSEHGLQTA

Sequences:

>Translated_204_residues
MPEQARYDAERRQADEALAGVFPAVSIFGSARTPQNHADYAFACRLARRLSDSGIAVISGGGPGIMEAANKGAFAGKSVS
VGLNIVLPHEQKPNPYQDIALRFSRFAERKAVFFRYSQAYVVMPGGFGTLDELFEILTLVQTGKVPPRPIVLVGKAFWSG
LAEWINAQLLARGLISEGAASLFAISDDEDEIVEYLSEHGLQTA
>Mature_203_residues
PEQARYDAERRQADEALAGVFPAVSIFGSARTPQNHADYAFACRLARRLSDSGIAVISGGGPGIMEAANKGAFAGKSVSV
GLNIVLPHEQKPNPYQDIALRFSRFAERKAVFFRYSQAYVVMPGGFGTLDELFEILTLVQTGKVPPRPIVLVGKAFWSGL
AEWINAQLLARGLISEGAASLFAISDDEDEIVEYLSEHGLQTA

Specific function: Unknown

COG id: COG1611

COG function: function code R; Predicted Rossmann fold nucleotide-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22060; Mature: 21929

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEQARYDAERRQADEALAGVFPAVSIFGSARTPQNHADYAFACRLARRLSDSGIAVISG
CCCCHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEC
GGPGIMEAANKGAFAGKSVSVGLNIVLPHEQKPNPYQDIALRFSRFAERKAVFFRYSQAY
CCCCHHHHCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEEECCEE
VVMPGGFGTLDELFEILTLVQTGKVPPRPIVLVGKAFWSGLAEWINAQLLARGLISEGAA
EEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCC
SLFAISDDEDEIVEYLSEHGLQTA
EEEEECCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PEQARYDAERRQADEALAGVFPAVSIFGSARTPQNHADYAFACRLARRLSDSGIAVISG
CCCHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEC
GGPGIMEAANKGAFAGKSVSVGLNIVLPHEQKPNPYQDIALRFSRFAERKAVFFRYSQAY
CCCCHHHHCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEEECCEE
VVMPGGFGTLDELFEILTLVQTGKVPPRPIVLVGKAFWSGLAEWINAQLLARGLISEGAA
EEECCCCCCHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCC
SLFAISDDEDEIVEYLSEHGLQTA
EEEEECCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA