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The map label for this gene is kdsD [H]

Identifier: 161870717

GI number: 161870717

Start: 1837995

End: 1838969

Strand: Reverse

Name: kdsD [H]

Synonym: NMCC_1790

Alternate gene names: 161870717

Gene position: 1838969-1837995 (Counterclockwise)

Preceding gene: 161870721

Following gene: 161870716

Centisome position: 85.4

GC content: 59.28

Gene sequence:

>975_bases
ATGGCAGAAAACGGAAAATATCTCGATTGGGCGCGCGAAGTGTTGCACACCGAAGCGGAAGGCTTGCGCGAAATTGCGGC
GGATTTGGACGAAAACTTCGCCCTTGCGGCGGACGCGTTGTTGCACTGCAAAGGCAGGGTCGTTATCACGGGCATGGGCA
AGTCGGGACATATCGGGCGCAAAATGGCGGCAACTATGGCCTCGACCGGCACGCCTGCGTTTTTCGTCCACCCTGCGGAA
GCGGCACACGGCGATTTGGGTATGATTGTGGACAACGACGTGGTCGTCGCGATTTCCAATTCCGGCGAAAGCGACGAAAT
CGCCGCCATCATCCCCGCACTCAAACGCAAAAACATCACGCTTGTCTGCATCACCGCCCGCCCCGATTCAACCATGGCGC
GCCATGCCGACATCCATATCACCGCATCGGTTTCGCAAGAAGCCTGCCCGCTGGGGCTTGCCCCGACCACCAGCACCACC
GCCGTCATGGCTTTGGGCGATGCGTTGGCGGTCGTTCTGTTGCGCGCGCGCGCGTTCACGCCCGACGACTTCGCCTTGAG
CCACCCTGCCGGCAGCCTCGGCAAACGCCTACTTTTGCGCGTTGCCGACATTATGCACAAAGGCGGCGGCCTGCCTGCCG
TCCGACTCGGCACGCCCTTGAAAGAAGCCATCGTCAGCATGAGTGAAAAAGGGCTGGGGATGCTGGCGGTAACGGACGGG
CAAGGCCGTCTGAAAGGCGTATTCACCGACGGCGATTTGCGCCGCCTGTTTCAAGAATGCGACAATTTTACCGGTCTTTC
GATAGACGAAGTCATGCATACACACCCTAAAACCATCGCCGCCGAACGCCTCGCCACCGAAGCCCTGAAAGTCATGCAGG
CAAACCATGTGAACGGGCTTCTGGTTACCGATGCAGATGGCGTGCTGATCGGCGCACTGAATATGCACGACCTTTTGGCG
GCGCGGATTGTATAA

Upstream 100 bases:

>100_bases
GTCATTTCTGATTCCTTTGGATGGATGGCGGGGTTTGAATGCTTATGCTACCCCGATTCGGAAATTTTGGGTAGTTTTGT
TACAGCAAAGGCGGATGGCA

Downstream 100 bases:

>100_bases
GGCGTTGCAGCCGTTTCAGACGGTATTTGTGGTAAGATATGCCGTCTGAAAACAAGGAAATCCCATGCAGGCAATTTCTC
CTGAATTACAGGCGCGCGCC

Product: KpsF/GutQ family sugar isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 323

Protein sequence:

>324_residues
MAENGKYLDWAREVLHTEAEGLREIAADLDENFALAADALLHCKGRVVITGMGKSGHIGRKMAATMASTGTPAFFVHPAE
AAHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKNITLVCITARPDSTMARHADIHITASVSQEACPLGLAPTTSTT
AVMALGDALAVVLLRARAFTPDDFALSHPAGSLGKRLLLRVADIMHKGGGLPAVRLGTPLKEAIVSMSEKGLGMLAVTDG
QGRLKGVFTDGDLRRLFQECDNFTGLSIDEVMHTHPKTIAAERLATEALKVMQANHVNGLLVTDADGVLIGALNMHDLLA
ARIV

Sequences:

>Translated_324_residues
MAENGKYLDWAREVLHTEAEGLREIAADLDENFALAADALLHCKGRVVITGMGKSGHIGRKMAATMASTGTPAFFVHPAE
AAHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKNITLVCITARPDSTMARHADIHITASVSQEACPLGLAPTTSTT
AVMALGDALAVVLLRARAFTPDDFALSHPAGSLGKRLLLRVADIMHKGGGLPAVRLGTPLKEAIVSMSEKGLGMLAVTDG
QGRLKGVFTDGDLRRLFQECDNFTGLSIDEVMHTHPKTIAAERLATEALKVMQANHVNGLLVTDADGVLIGALNMHDLLA
ARIV
>Mature_323_residues
AENGKYLDWAREVLHTEAEGLREIAADLDENFALAADALLHCKGRVVITGMGKSGHIGRKMAATMASTGTPAFFVHPAEA
AHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKNITLVCITARPDSTMARHADIHITASVSQEACPLGLAPTTSTTA
VMALGDALAVVLLRARAFTPDDFALSHPAGSLGKRLLLRVADIMHKGGGLPAVRLGTPLKEAIVSMSEKGLGMLAVTDGQ
GRLKGVFTDGDLRRLFQECDNFTGLSIDEVMHTHPKTIAAERLATEALKVMQANHVNGLLVTDADGVLIGALNMHDLLAA
RIV

Specific function: Catalyzes the interconversion of D-arabinose 5-phosphate and D-ribulose 5-phosphate [H]

COG id: COG0794

COG function: function code M; Predicted sugar phosphate isomerase involved in capsule formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1789588, Length=318, Percent_Identity=55.0314465408805, Blast_Score=352, Evalue=1e-98,
Organism=Escherichia coli, GI87082151, Length=317, Percent_Identity=43.8485804416404, Blast_Score=266, Evalue=1e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000644
- InterPro:   IPR004800
- InterPro:   IPR001347 [H]

Pfam domain/function: PF00571 CBS; PF01380 SIS [H]

EC number: =5.3.1.13 [H]

Molecular weight: Translated: 34128; Mature: 33997

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: PS01199 RIBOSOMAL_L1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAENGKYLDWAREVLHTEAEGLREIAADLDENFALAADALLHCKGRVVITGMGKSGHIGR
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEECCCCCCCHH
KMAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKNIT
HHHHHHHCCCCCEEEEECCCCCCCCEEEEEECCEEEEECCCCCCCHHHHHHHHHHCCCEE
LVCITARPDSTMARHADIHITASVSQEACPLGLAPTTSTTAVMALGDALAVVLLRARAFT
EEEEECCCCCCHHEECEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
PDDFALSHPAGSLGKRLLLRVADIMHKGGGLPAVRLGTPLKEAIVSMSEKGLGMLAVTDG
CCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHCCCCEEEEEECC
QGRLKGVFTDGDLRRLFQECDNFTGLSIDEVMHTHPKTIAAERLATEALKVMQANHVNGL
CCEEEEEECCHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEE
LVTDADGVLIGALNMHDLLAARIV
EEECCCCEEEEECCHHHHHHHHCC
>Mature Secondary Structure 
AENGKYLDWAREVLHTEAEGLREIAADLDENFALAADALLHCKGRVVITGMGKSGHIGR
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEECCCCCCCHH
KMAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKNIT
HHHHHHHCCCCCEEEEECCCCCCCCEEEEEECCEEEEECCCCCCCHHHHHHHHHHCCCEE
LVCITARPDSTMARHADIHITASVSQEACPLGLAPTTSTTAVMALGDALAVVLLRARAFT
EEEEECCCCCCHHEECEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
PDDFALSHPAGSLGKRLLLRVADIMHKGGGLPAVRLGTPLKEAIVSMSEKGLGMLAVTDG
CCCCEECCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHCCCCEEEEEECC
QGRLKGVFTDGDLRRLFQECDNFTGLSIDEVMHTHPKTIAAERLATEALKVMQANHVNGL
CCEEEEEECCHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEE
LVTDADGVLIGALNMHDLLAARIV
EEECCCCEEEEECCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]