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The map label for this gene is kdsC [H]

Identifier: 161870716

GI number: 161870716

Start: 1837394

End: 1837867

Strand: Reverse

Name: kdsC [H]

Synonym: NMCC_1789

Alternate gene names: 161870716

Gene position: 1837867-1837394 (Counterclockwise)

Preceding gene: 161870717

Following gene: 161870715

Centisome position: 85.35

GC content: 58.23

Gene sequence:

>474_bases
GTGGACGGTGTTTTGACCGACGGGCGCATCTTTATCCGCGATAACGGCGAAGAAATCAAATCGTTTCACACACTGGACGG
ACACGGTCTGAAAATGCTTCAGGCAAGCGGCGTGCAGACTGCGATTATCACAGGTCGGGACGCGCCCTCCGTCGGCATCC
GCGTCAAACAGTTGGGCATAAATTACTACTTCAAAGGCATTTCGGACAAACGCGCCGCGTATGAAGAGCTGCGCGCTCAG
GTCGGCGTGGAAGAAGCCGAGTGTGCCTTTGTCGGCGACGACGTGGTCGATTTGCCGGTGATGGTGCGTTGCGGATTGCC
GGTTGCCGTTCCCGACGCGCATTGGTTTACGCTGCAACACGCCGCCTATATTGCCAAACGCCCCGGCGGTGCGGGCGCGG
TGCGCGAAGTGTGCGACCTGATTATGCAGGCGCAAGGGACTTTGGGCGCGGCTTTGAACGAGTACATCAAATGA

Upstream 100 bases:

>100_bases
TGTGGTAAGATATGCCGTCTGAAAACAAGGAAATCCCATGCAGGCAATTTCTCCTGAATTACAGGCGCGCGCCGCCAAAA
TCAAACTGCTGATCCTGGAT

Downstream 100 bases:

>100_bases
AAATAAGATGGCGGTACGGAATTGCGTTCCCATTGATATTGGCGGTTGCCTTGGGCGGTCTGTCGGCATGGTTGGGACGC
ATCAGCGAAGTCGAGATTGA

Product: hypothetical protein

Products: NA

Alternate protein names: KDO 8-P phosphatase [H]

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MDGVLTDGRIFIRDNGEEIKSFHTLDGHGLKMLQASGVQTAIITGRDAPSVGIRVKQLGINYYFKGISDKRAAYEELRAQ
VGVEEAECAFVGDDVVDLPVMVRCGLPVAVPDAHWFTLQHAAYIAKRPGGAGAVREVCDLIMQAQGTLGAALNEYIK

Sequences:

>Translated_157_residues
MDGVLTDGRIFIRDNGEEIKSFHTLDGHGLKMLQASGVQTAIITGRDAPSVGIRVKQLGINYYFKGISDKRAAYEELRAQ
VGVEEAECAFVGDDVVDLPVMVRCGLPVAVPDAHWFTLQHAAYIAKRPGGAGAVREVCDLIMQAQGTLGAALNEYIK
>Mature_157_residues
MDGVLTDGRIFIRDNGEEIKSFHTLDGHGLKMLQASGVQTAIITGRDAPSVGIRVKQLGINYYFKGISDKRAAYEELRAQ
VGVEEAECAFVGDDVVDLPVMVRCGLPVAVPDAHWFTLQHAAYIAKRPGGAGAVREVCDLIMQAQGTLGAALNEYIK

Specific function: Catalyzes the hydrolysis of KDO 8-P to KDO and inorganic phosphate [H]

COG id: COG1778

COG function: function code R; Low specificity phosphatase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the kdsC family [H]

Homologues:

Organism=Homo sapiens, GI8923900, Length=141, Percent_Identity=31.9148936170213, Blast_Score=73, Evalue=1e-13,
Organism=Escherichia coli, GI2367202, Length=156, Percent_Identity=44.8717948717949, Blast_Score=139, Evalue=9e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR013200
- InterPro:   IPR006549
- InterPro:   IPR010023 [H]

Pfam domain/function: PF08282 Hydrolase_3 [H]

EC number: =3.1.3.45 [H]

Molecular weight: Translated: 16946; Mature: 16946

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGVLTDGRIFIRDNGEEIKSFHTLDGHGLKMLQASGVQTAIITGRDAPSVGIRVKQLGI
CCCCCCCCEEEEECCCHHHHHEECCCCCCEEEEECCCCEEEEEECCCCCCCCEEEEEECC
NYYFKGISDKRAAYEELRAQVGVEEAECAFVGDDVVDLPVMVRCGLPVAVPDAHWFTLQH
EEEEECCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCEECCCCEECCCCCEEHHHH
AAYIAKRPGGAGAVREVCDLIMQAQGTLGAALNEYIK
HHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCC
>Mature Secondary Structure
MDGVLTDGRIFIRDNGEEIKSFHTLDGHGLKMLQASGVQTAIITGRDAPSVGIRVKQLGI
CCCCCCCCEEEEECCCHHHHHEECCCCCCEEEEECCCCEEEEEECCCCCCCCEEEEEECC
NYYFKGISDKRAAYEELRAQVGVEEAECAFVGDDVVDLPVMVRCGLPVAVPDAHWFTLQH
EEEEECCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCEECCCCEECCCCCEEHHHH
AAYIAKRPGGAGAVREVCDLIMQAQGTLGAALNEYIK
HHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]