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The map label for this gene is tbpB [H]

Identifier: 161870613

GI number: 161870613

Start: 1716196

End: 1718064

Strand: Reverse

Name: tbpB [H]

Synonym: NMCC_1682

Alternate gene names: 161870613

Gene position: 1718064-1716196 (Counterclockwise)

Preceding gene: 161870615

Following gene: 161870612

Centisome position: 79.78

GC content: 46.39

Gene sequence:

>1869_bases
TTGCCGAGCAAGCCCCAAAACTTACCCGAGCGACAGCAATCGGTTATTGATAAAGTAAAAACAGACGATGGCAGCAATAT
TTACACTTCCCCTTATCTCACGCAATCAAACCATCAAAACGGCAGCACTAATAGCGGTGCAAACCAACCAAAAAACGAAG
CAACAGGTTACAAAAATTTCGAATATGTTTATTCCGGTTGGTTTTATAAACATGCAGCGAATGAAACAGATTTCAGTAAA
AACAAATTTAAGTCAGGCGACGACGGCTATATCTTTTATCACGGTGAAAAACCTTCCCGACAACTTCCCGCTTCTGGAAA
AATTACCTATAAAGGTGTGTGGCATTTTGTAACCGATACGAAAAAGGGACAAAAATTTAACGATATTCTTGAAGCCTCAA
AAGGGCAAGGCGACAGGTATAGCGGATTTTCGGGCGATGAAGGCGAAACAATTTCCAATAGAACTGATTCCGAGCTTAAG
ACGGATCAAGAGGGTTATGGTTTTACCTCAAATTTAGAAGTGGATTTCGGCAGTAAAAAATTGACGGGTAAATTAATACG
CAATAATAGAGTTACAAACGCTACTACTAACGATAAATACACCACCCAATACTACAGCCTTGATGCCCAAATAACAGGCA
ACCGCTTCAACGGTAAGGCGATAGCGACCGACAAACCCGACACTGGAGGAACCAAACTACATCCCTTTGTTTCCGACTCG
TCTTCTTTGAGCGGCAGCTTTTTCGGCCCGAAGGGTGAGGAATTGGGTTTCCGCTTTTTGAGCGACGATAAAAAAGTTGC
GGTTGTCGGCAGCGCGAAAACCAAAGACAAAAACGCAAATGGCAATACTCCGGCGGCTTCAAGCGGCGCAGGTGCGGCAA
CTATGCCGTCTGAAACCAGGCTGACCACGGTTTTGGATGCGGTCGAGCTGAAATCGGACGGTAAGAAAGTCGAAAATCTC
GACAACTTCAGCGACGCTACCCGACTGGTTGTCGACGGCATTATGATTCCGCTCCTGCCCGAGACTTCCGAAAGTGGGAG
CAATCAGGCAGATAAAGGTAAAAAAGGTAAAAACGGTAAAAACGGCGGAACAGACTTTACCTACAAAACAACCTACACGC
CGAAAAGCGATGAAAAAGACACCCAAGCAGGTACGCCGACGAATGGGGCGCAAACCGCTTCAAATACGGCAGGTGATACC
AATGGCAAAACAAAAACCTATGAAGTCGAAGTCTGCTGTTCCAACCTCAATTATTTGAAATATGGAATGTTGACGCGCAA
AAACAGCAAGTCCGCGATGCAGGCAGGAGAAAGCAGTAGTCAAGCTGATGCTAAAACGGAACAAGTTGAACAAAGTATGT
TCCTCCAAGGCGAGCGCACCGATGAAAAAGAGATTCCAACCGACCAAAACGTCGTTTATCGGGGGTCTTGGTACGGGCAT
ATTGCCAACGACAAAAGCACAAGCTGGAGCGGCAATGCTTCAGATAAAGAGGGCGGCAACAGGGCGGAATTTACTGTGAA
TTTTGGCGAGAAAAAAATTACCGGCAAGTTAACCGCTGAAAACAGGCAGGCGCAAACCTTTACCATTGAGGGAATGATTC
AGGGCAACGGCTTTGAAGGTACGGCGAAAACTGCTGAGTCAGGTTTTGATCTCGATCAAAAAAATACCACCCGCACGCCT
AAGGCATATATCACAGATGCCAAGGTAAAGGGCGGTTTTTACGGGCCTAAAGCCGAAGAGTTGGGCGGATGGTTTGCCTA
TCCGGGCGATAAACAAACGGAAAAGGCAACAGCTACATCCAGCGATGGAAAATCAGCAAGCAGCGCGACCGTGGTATTCG
GTGCGAAACGCCAACAGCCTGTGCAATAA

Upstream 100 bases:

>100_bases
CGGATACGGTTTTGCGATGAGGTTGAAACGGAGGAATCGGCATCCGCAGGCAAAAGAAGACAAAGTTGAACTAAACCCAA
ATGATTGGGAGGAGACAGGA

Downstream 100 bases:

>100_bases
GCACGGTTGCCGAACAATCAAGAATAAGGCTTCAGACGGCACCGCTCCTTCCGATGCCGTCTGAAAGCGAAGATTAGGGA
AACATTATGCAACAGCAACA

Product: transferrin-binding protein B

Products: NA

Alternate protein names: TBP-2 [H]

Number of amino acids: Translated: 622; Mature: 621

Protein sequence:

>622_residues
MPSKPQNLPERQQSVIDKVKTDDGSNIYTSPYLTQSNHQNGSTNSGANQPKNEATGYKNFEYVYSGWFYKHAANETDFSK
NKFKSGDDGYIFYHGEKPSRQLPASGKITYKGVWHFVTDTKKGQKFNDILEASKGQGDRYSGFSGDEGETISNRTDSELK
TDQEGYGFTSNLEVDFGSKKLTGKLIRNNRVTNATTNDKYTTQYYSLDAQITGNRFNGKAIATDKPDTGGTKLHPFVSDS
SSLSGSFFGPKGEELGFRFLSDDKKVAVVGSAKTKDKNANGNTPAASSGAGAATMPSETRLTTVLDAVELKSDGKKVENL
DNFSDATRLVVDGIMIPLLPETSESGSNQADKGKKGKNGKNGGTDFTYKTTYTPKSDEKDTQAGTPTNGAQTASNTAGDT
NGKTKTYEVEVCCSNLNYLKYGMLTRKNSKSAMQAGESSSQADAKTEQVEQSMFLQGERTDEKEIPTDQNVVYRGSWYGH
IANDKSTSWSGNASDKEGGNRAEFTVNFGEKKITGKLTAENRQAQTFTIEGMIQGNGFEGTAKTAESGFDLDQKNTTRTP
KAYITDAKVKGGFYGPKAEELGGWFAYPGDKQTEKATATSSDGKSASSATVVFGAKRQQPVQ

Sequences:

>Translated_622_residues
MPSKPQNLPERQQSVIDKVKTDDGSNIYTSPYLTQSNHQNGSTNSGANQPKNEATGYKNFEYVYSGWFYKHAANETDFSK
NKFKSGDDGYIFYHGEKPSRQLPASGKITYKGVWHFVTDTKKGQKFNDILEASKGQGDRYSGFSGDEGETISNRTDSELK
TDQEGYGFTSNLEVDFGSKKLTGKLIRNNRVTNATTNDKYTTQYYSLDAQITGNRFNGKAIATDKPDTGGTKLHPFVSDS
SSLSGSFFGPKGEELGFRFLSDDKKVAVVGSAKTKDKNANGNTPAASSGAGAATMPSETRLTTVLDAVELKSDGKKVENL
DNFSDATRLVVDGIMIPLLPETSESGSNQADKGKKGKNGKNGGTDFTYKTTYTPKSDEKDTQAGTPTNGAQTASNTAGDT
NGKTKTYEVEVCCSNLNYLKYGMLTRKNSKSAMQAGESSSQADAKTEQVEQSMFLQGERTDEKEIPTDQNVVYRGSWYGH
IANDKSTSWSGNASDKEGGNRAEFTVNFGEKKITGKLTAENRQAQTFTIEGMIQGNGFEGTAKTAESGFDLDQKNTTRTP
KAYITDAKVKGGFYGPKAEELGGWFAYPGDKQTEKATATSSDGKSASSATVVFGAKRQQPVQ
>Mature_621_residues
PSKPQNLPERQQSVIDKVKTDDGSNIYTSPYLTQSNHQNGSTNSGANQPKNEATGYKNFEYVYSGWFYKHAANETDFSKN
KFKSGDDGYIFYHGEKPSRQLPASGKITYKGVWHFVTDTKKGQKFNDILEASKGQGDRYSGFSGDEGETISNRTDSELKT
DQEGYGFTSNLEVDFGSKKLTGKLIRNNRVTNATTNDKYTTQYYSLDAQITGNRFNGKAIATDKPDTGGTKLHPFVSDSS
SLSGSFFGPKGEELGFRFLSDDKKVAVVGSAKTKDKNANGNTPAASSGAGAATMPSETRLTTVLDAVELKSDGKKVENLD
NFSDATRLVVDGIMIPLLPETSESGSNQADKGKKGKNGKNGGTDFTYKTTYTPKSDEKDTQAGTPTNGAQTASNTAGDTN
GKTKTYEVEVCCSNLNYLKYGMLTRKNSKSAMQAGESSSQADAKTEQVEQSMFLQGERTDEKEIPTDQNVVYRGSWYGHI
ANDKSTSWSGNASDKEGGNRAEFTVNFGEKKITGKLTAENRQAQTFTIEGMIQGNGFEGTAKTAESGFDLDQKNTTRTPK
AYITDAKVKGGFYGPKAEELGGWFAYPGDKQTEKATATSSDGKSASSATVVFGAKRQQPVQ

Specific function: Acts as a transferrin receptor and is required for transferrin utilization [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001677 [H]

Pfam domain/function: PF01298 Lipoprotein_5 [H]

EC number: NA

Molecular weight: Translated: 67371; Mature: 67240

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSKPQNLPERQQSVIDKVKTDDGSNIYTSPYLTQSNHQNGSTNSGANQPKNEATGYKNF
CCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCEECCCCCCCCCCCCCCCCCHHCCCCCCE
EYVYSGWFYKHAANETDFSKNKFKSGDDGYIFYHGEKPSRQLPASGKITYKGVWHFVTDT
EEEEECEEEEECCCCCCCCHHHCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEEEECC
KKGQKFNDILEASKGQGDRYSGFSGDEGETISNRTDSELKTDQEGYGFTSNLEVDFGSKK
CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCEEEEECCCCH
LTGKLIRNNRVTNATTNDKYTTQYYSLDAQITGNRFNGKAIATDKPDTGGTKLHPFVSDS
HHHHHHHCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCEEEECCCCCCCCCEECEEECCC
SSLSGSFFGPKGEELGFRFLSDDKKVAVVGSAKTKDKNANGNTPAASSGAGAATMPSETR
CCCCCCCCCCCCHHCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
LTTVLDAVELKSDGKKVENLDNFSDATRLVVDGIMIPLLPETSESGSNQADKGKKGKNGK
HHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHCEEEECCCCCCCCCCCCCCCCCCCCCCC
NGGTDFTYKTTYTPKSDEKDTQAGTPTNGAQTASNTAGDTNGKTKTYEVEVCCSNLNYLK
CCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCEEE
YGMLTRKNSKSAMQAGESSSQADAKTEQVEQSMFLQGERTDEKEIPTDQNVVYRGSWYGH
EEEEECCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCEEEECCEEEE
IANDKSTSWSGNASDKEGGNRAEFTVNFGEKKITGKLTAENRQAQTFTIEGMIQGNGFEG
ECCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEEECCCCCEEEEEEEEEEECCCCCC
TAKTAESGFDLDQKNTTRTPKAYITDAKVKGGFYGPKAEELGGWFAYPGDKQTEKATATS
CHHHHHCCCCCCCCCCCCCCCEEEEECEECCCCCCCCHHHCCCEEECCCCCCCCCCCCCC
SDGKSASSATVVFGAKRQQPVQ
CCCCCCCCEEEEEECCCCCCCC
>Mature Secondary Structure 
PSKPQNLPERQQSVIDKVKTDDGSNIYTSPYLTQSNHQNGSTNSGANQPKNEATGYKNF
CCCCCCCHHHHHHHHHHHCCCCCCEEEECCCEECCCCCCCCCCCCCCCCCHHCCCCCCE
EYVYSGWFYKHAANETDFSKNKFKSGDDGYIFYHGEKPSRQLPASGKITYKGVWHFVTDT
EEEEECEEEEECCCCCCCCHHHCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEEEEECC
KKGQKFNDILEASKGQGDRYSGFSGDEGETISNRTDSELKTDQEGYGFTSNLEVDFGSKK
CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCEEEEECCCCH
LTGKLIRNNRVTNATTNDKYTTQYYSLDAQITGNRFNGKAIATDKPDTGGTKLHPFVSDS
HHHHHHHCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCEEEECCCCCCCCCEECEEECCC
SSLSGSFFGPKGEELGFRFLSDDKKVAVVGSAKTKDKNANGNTPAASSGAGAATMPSETR
CCCCCCCCCCCCHHCCEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
LTTVLDAVELKSDGKKVENLDNFSDATRLVVDGIMIPLLPETSESGSNQADKGKKGKNGK
HHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHCEEEECCCCCCCCCCCCCCCCCCCCCCC
NGGTDFTYKTTYTPKSDEKDTQAGTPTNGAQTASNTAGDTNGKTKTYEVEVCCSNLNYLK
CCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCEEE
YGMLTRKNSKSAMQAGESSSQADAKTEQVEQSMFLQGERTDEKEIPTDQNVVYRGSWYGH
EEEEECCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHCCCCCCCEEEECCEEEE
IANDKSTSWSGNASDKEGGNRAEFTVNFGEKKITGKLTAENRQAQTFTIEGMIQGNGFEG
ECCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEEECCCCCEEEEEEEEEEECCCCCC
TAKTAESGFDLDQKNTTRTPKAYITDAKVKGGFYGPKAEELGGWFAYPGDKQTEKATATS
CHHHHHCCCCCCCCCCCCCCCEEEEECEECCCCCCCCHHHCCCEEECCCCCCCCCCCCCC
SDGKSASSATVVFGAKRQQPVQ
CCCCCCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8344530 [H]