Click here to switch to the map view.

The map label for this gene is bioC [H]

Identifier: 161870600

GI number: 161870600

Start: 1697145

End: 1697939

Strand: Reverse

Name: bioC [H]

Synonym: NMCC_1668

Alternate gene names: 161870600

Gene position: 1697939-1697145 (Counterclockwise)

Preceding gene: 161870601

Following gene: 161870599

Centisome position: 78.85

GC content: 42.14

Gene sequence:

>795_bases
TTGGTCGGCACTATGGAATCACTGACTGCCATAAATAAATCGCGCATTCGGCAGGCTTTCCAAAAAGCATTAAACGATTA
TGACCGGCACGCCTTAATCCAACAAAAAATGACGATTAATCTAATGGCGCATTTGCAAGATTATTTGCCGGATATGCCAT
TGGAAAACGTGTTGGAATTGGGCTGTGGCTCAGGAATGTTGAGTGCCTTGCTGCAAAAACAGATTTCAGCGAATTATTGG
TTATTTAATGATTTGTGCGATGTGCAGCCCCAACTGGCTGAAAAACTGCCGCAATCCTTTGATTTTTATTGCGGCGATGC
GGAAAACTTTCCTTTTCAACGACAATTTGACTTAATCGCAAGCGCATCTGCCGTGCAATGGTTTCATCAACCCGACGCTT
TTATCGCTCATTGCAAAACAGGCTTGAAAGCAAACGGATTATTGGCGGTTGCAACCTTTGGCAAAGACAATTTAAAAGAA
GTCCGCCAAATTACAAATATAGGCTTAAATTACCCGACTTTATCCCAATGGCAGACTTGGTTAGCCAAAGATTTTGAGCT
TTTATGGTGTGAGGATTTTAAGGTAATACTAGACTTTGATACGCCGTTAGATGTACTCAAACACCTTAAATATACAGGCG
TAACAGCCACGAACCAAAAAAATTGGACAAGAAAAAATCTCAATGAATTTATTGGCGATTACTTGTCGGCGTTCAGTATG
CCGTCGGGCAAAGTGCACCTGACTTATCATCCGTTATTTTTTATCGCGCGCTACTCTGCGGCGGGCAGGCAATAA

Upstream 100 bases:

>100_bases
ATAAAATTTTTATGTCTGCCAATCAGCACCGATATTGGACAGCGCGTTGCACCGTTCGGGAAATTGACGGCGGACATTAC
CTGTTTTCAAGATTCACCCA

Downstream 100 bases:

>100_bases
GGCAGCTTATGGGCAAAGTTATTTTTATATCGGGTATTGATACTGATGTGGGTAAAAGGTAATATGGCGAGGCTTGTGCA
GAAGGCATATTGTTAAACGT

Product: biotin synthesis protein BioC, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MVGTMESLTAINKSRIRQAFQKALNDYDRHALIQQKMTINLMAHLQDYLPDMPLENVLELGCGSGMLSALLQKQISANYW
LFNDLCDVQPQLAEKLPQSFDFYCGDAENFPFQRQFDLIASASAVQWFHQPDAFIAHCKTGLKANGLLAVATFGKDNLKE
VRQITNIGLNYPTLSQWQTWLAKDFELLWCEDFKVILDFDTPLDVLKHLKYTGVTATNQKNWTRKNLNEFIGDYLSAFSM
PSGKVHLTYHPLFFIARYSAAGRQ

Sequences:

>Translated_264_residues
MVGTMESLTAINKSRIRQAFQKALNDYDRHALIQQKMTINLMAHLQDYLPDMPLENVLELGCGSGMLSALLQKQISANYW
LFNDLCDVQPQLAEKLPQSFDFYCGDAENFPFQRQFDLIASASAVQWFHQPDAFIAHCKTGLKANGLLAVATFGKDNLKE
VRQITNIGLNYPTLSQWQTWLAKDFELLWCEDFKVILDFDTPLDVLKHLKYTGVTATNQKNWTRKNLNEFIGDYLSAFSM
PSGKVHLTYHPLFFIARYSAAGRQ
>Mature_264_residues
MVGTMESLTAINKSRIRQAFQKALNDYDRHALIQQKMTINLMAHLQDYLPDMPLENVLELGCGSGMLSALLQKQISANYW
LFNDLCDVQPQLAEKLPQSFDFYCGDAENFPFQRQFDLIASASAVQWFHQPDAFIAHCKTGLKANGLLAVATFGKDNLKE
VRQITNIGLNYPTLSQWQTWLAKDFELLWCEDFKVILDFDTPLDVLKHLKYTGVTATNQKNWTRKNLNEFIGDYLSAFSM
PSGKVHLTYHPLFFIARYSAAGRQ

Specific function: BioC is involved in an early, but chemically unexplored, step in the conversion of pimelic acid to biotin [H]

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011814
- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 30157; Mature: 30157

Theoretical pI: Translated: 6.87; Mature: 6.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGTMESLTAINKSRIRQAFQKALNDYDRHALIQQKMTINLMAHLQDYLPDMPLENVLEL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
GCGSGMLSALLQKQISANYWLFNDLCDVQPQLAEKLPQSFDFYCGDAENFPFQRQFDLIA
CCCCHHHHHHHHHHHCCCCEEEHHHHCCCHHHHHHCCHHCCCCCCCCCCCCCHHHHHHHH
SASAVQWFHQPDAFIAHCKTGLKANGLLAVATFGKDNLKEVRQITNIGLNYPTLSQWQTW
HHHHHHHHCCCCHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHH
LAKDFELLWCEDFKVILDFDTPLDVLKHLKYTGVTATNQKNWTRKNLNEFIGDYLSAFSM
HHCCCEEEEECCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
PSGKVHLTYHPLFFIARYSAAGRQ
CCCCEEEEECHHHHHHHHHHCCCC
>Mature Secondary Structure
MVGTMESLTAINKSRIRQAFQKALNDYDRHALIQQKMTINLMAHLQDYLPDMPLENVLEL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
GCGSGMLSALLQKQISANYWLFNDLCDVQPQLAEKLPQSFDFYCGDAENFPFQRQFDLIA
CCCCHHHHHHHHHHHCCCCEEEHHHHCCCHHHHHHCCHHCCCCCCCCCCCCCHHHHHHHH
SASAVQWFHQPDAFIAHCKTGLKANGLLAVATFGKDNLKEVRQITNIGLNYPTLSQWQTW
HHHHHHHHCCCCHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHH
LAKDFELLWCEDFKVILDFDTPLDVLKHLKYTGVTATNQKNWTRKNLNEFIGDYLSAFSM
HHCCCEEEEECCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
PSGKVHLTYHPLFFIARYSAAGRQ
CCCCEEEEECHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]