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The map label for this gene is ygdL [C]

Identifier: 161870364

GI number: 161870364

Start: 1431092

End: 1431868

Strand: Direct

Name: ygdL [C]

Synonym: NMCC_1408

Alternate gene names: 161870364

Gene position: 1431092-1431868 (Clockwise)

Preceding gene: 161870360

Following gene: 161870365

Centisome position: 66.46

GC content: 56.37

Gene sequence:

>777_bases
ATGTCCGACAACGCTTTGACCTCTTCGCGACGCTTCGGCGGCATCGCCAGACTCTACGGAGACTCTGCCTTGGCGCACTT
TTCACAGGCACACGTCTGCGTAGTCGGCGTGGGCGGTGTCGGCTCGTGGGCGGTCGAGGCTTTGGCGCGGACGGGCATCG
GACGTTTGACTTTGATTGATTTGGACAACGTTGCCGAATCGAATGTCAACCGCCAGCTGCACGCCCTGACCGGAGACTTC
GGCAAAGCAAAAGTTACCGCCTTGCGCGAACGCGTCGCCCAAATCAACCCAGAATGCCAAGTGTTTGAAATTGAAGATTT
CGTTACCGAAGACAATTTGCCGGAATACTTCGGAAAAGGTTTTGATTTCGTCATCGACGCGATCGACCAAGTGCGCGTCA
AAGCAGCAATGGCGGCTTATTTTGTGGAACGCAAACAACCGTTTGTCCTCAGCGGCGGCGCGGGCGGACAAAAAAATCCG
GCGTTAATCCAAACCGCCGATTTGAGCCGCGTAACCCACGACCCGCTGCTTGCCAACCTGCGCTACACCTTGCGGAAACG
CTACGGATTCAGCCGCGATACGAAAGCAAATATGCGCGTGCCTTGCGTGTATTCGACCGAAAATATCGTGCCGCCGCAGT
CTAGGGAGGCTTGTTCGGCAGATGCCGCTCCGCAAGGCTTGTCGTGCGCCGGCTACGGTGCAAGCATGCTCGTTACCGCT
TCGTTCGGGCTATATTGCGCACAGGCGGCGGTGGAACACATCGCAGACAAAAAATAA

Upstream 100 bases:

>100_bases
CGACCGCTTTCCAGTATAATATGCCGCTTCCGTGCAGTCAGGCATTTTTTGCCGGCTTTCGTTCACTTTTTGATTTGACG
CAATCTTGCAGGATTCGACC

Downstream 100 bases:

>100_bases
GCAATGCCGTCTGAAACAGGATTCAGACGGCATTTGAACAAACGCGGCAATCAAGCTGTCGGTTCAGAAAAACCAACATC
GGCACGCCTAAAACCGTATT

Product: HesA/MoeB/ThiF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MSDNALTSSRRFGGIARLYGDSALAHFSQAHVCVVGVGGVGSWAVEALARTGIGRLTLIDLDNVAESNVNRQLHALTGDF
GKAKVTALRERVAQINPECQVFEIEDFVTEDNLPEYFGKGFDFVIDAIDQVRVKAAMAAYFVERKQPFVLSGGAGGQKNP
ALIQTADLSRVTHDPLLANLRYTLRKRYGFSRDTKANMRVPCVYSTENIVPPQSREACSADAAPQGLSCAGYGASMLVTA
SFGLYCAQAAVEHIADKK

Sequences:

>Translated_258_residues
MSDNALTSSRRFGGIARLYGDSALAHFSQAHVCVVGVGGVGSWAVEALARTGIGRLTLIDLDNVAESNVNRQLHALTGDF
GKAKVTALRERVAQINPECQVFEIEDFVTEDNLPEYFGKGFDFVIDAIDQVRVKAAMAAYFVERKQPFVLSGGAGGQKNP
ALIQTADLSRVTHDPLLANLRYTLRKRYGFSRDTKANMRVPCVYSTENIVPPQSREACSADAAPQGLSCAGYGASMLVTA
SFGLYCAQAAVEHIADKK
>Mature_257_residues
SDNALTSSRRFGGIARLYGDSALAHFSQAHVCVVGVGGVGSWAVEALARTGIGRLTLIDLDNVAESNVNRQLHALTGDFG
KAKVTALRERVAQINPECQVFEIEDFVTEDNLPEYFGKGFDFVIDAIDQVRVKAAMAAYFVERKQPFVLSGGAGGQKNPA
LIQTADLSRVTHDPLLANLRYTLRKRYGFSRDTKANMRVPCVYSTENIVPPQSREACSADAAPQGLSCAGYGASMLVTAS
FGLYCAQAAVEHIADKK

Specific function: Unknown

COG id: COG1179

COG function: function code H; Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesA/moeB/thiF family [H]

Homologues:

Organism=Escherichia coli, GI1789177, Length=253, Percent_Identity=50.5928853754941, Blast_Score=259, Evalue=2e-70,
Organism=Escherichia coli, GI1787048, Length=128, Percent_Identity=32.8125, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI87082356, Length=130, Percent_Identity=30.7692307692308, Blast_Score=68, Evalue=7e-13,
Organism=Saccharomyces cerevisiae, GI6321790, Length=179, Percent_Identity=27.3743016759777, Blast_Score=87, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6322825, Length=171, Percent_Identity=28.6549707602339, Blast_Score=77, Evalue=3e-15,
Organism=Saccharomyces cerevisiae, GI6325438, Length=142, Percent_Identity=28.8732394366197, Blast_Score=68, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24660640, Length=136, Percent_Identity=30.8823529411765, Blast_Score=68, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009036
- InterPro:   IPR016040
- InterPro:   IPR000594 [H]

Pfam domain/function: PF00899 ThiF [H]

EC number: NA

Molecular weight: Translated: 27809; Mature: 27678

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDNALTSSRRFGGIARLYGDSALAHFSQAHVCVVGVGGVGSWAVEALARTGIGRLTLID
CCCCCCCCHHHHCCHHHHHCCHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCEEEEEE
LDNVAESNVNRQLHALTGDFGKAKVTALRERVAQINPECQVFEIEDFVTEDNLPEYFGKG
CCHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEHHHHHCCCCCHHHHCCC
FDFVIDAIDQVRVKAAMAAYFVERKQPFVLSGGAGGQKNPALIQTADLSRVTHDPLLANL
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEECCHHHHHCCHHHHHH
RYTLRKRYGFSRDTKANMRVPCVYSTENIVPPQSREACSADAAPQGLSCAGYGASMLVTA
HHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEHHH
SFGLYCAQAAVEHIADKK
HHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SDNALTSSRRFGGIARLYGDSALAHFSQAHVCVVGVGGVGSWAVEALARTGIGRLTLID
CCCCCCCHHHHCCHHHHHCCHHHHHHCCCCEEEEEECCCHHHHHHHHHHCCCCEEEEEE
LDNVAESNVNRQLHALTGDFGKAKVTALRERVAQINPECQVFEIEDFVTEDNLPEYFGKG
CCHHHHHHHCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEEHHHHHCCCCCHHHHCCC
FDFVIDAIDQVRVKAAMAAYFVERKQPFVLSGGAGGQKNPALIQTADLSRVTHDPLLANL
HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEECCHHHHHCCHHHHHH
RYTLRKRYGFSRDTKANMRVPCVYSTENIVPPQSREACSADAAPQGLSCAGYGASMLVTA
HHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEECCCCCCEEHHH
SFGLYCAQAAVEHIADKK
HHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]