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The map label for this gene is rdxB [H]

Identifier: 161870324

GI number: 161870324

Start: 1385316

End: 1386812

Strand: Reverse

Name: rdxB [H]

Synonym: NMCC_1368

Alternate gene names: 161870324

Gene position: 1386812-1385316 (Counterclockwise)

Preceding gene: 161870325

Following gene: 161870323

Centisome position: 64.4

GC content: 53.44

Gene sequence:

>1497_bases
ATGACCACGGAAAACCAAGCCGGCAGTCCGGCATCCGGAATCGGCACGTCCGAACAAACAAAAGCCGCGCCGAAAGCAAA
AAAAACATTCGATCCGCGAGCCAGCGTGATTCAAATCCATCCCGAAGGCGAACGCATCCATCCCAAAAAGGCGGAAGGAC
GGTTCGCCAAACTGCGTATCGCCGCCGTATTGGCGACGCAGTTTGTGTTTTACGTCATTCCGTGGTTCAACTGGAGCGGC
AGGCAGGCCGTCGTTTTCAATATCCCCGAACGGCATTTCTTCATTTTCGGATTGTCGTTGGGGGTGGGCGATTTGATTTA
CCTTGCCTTGCTGCTGATGATTTGCGCCTTCGGGCTGTTTTGGTGGACGACGATTGCAGGGCGACTGTGGTGCGGCTATT
CCTGCCCGCAAACGGTTTACACCGAAATTATGCTGTGGATTGACAACCTGGTCGAAGGCGATAGAAACAAACGGCTGAAA
CTGGAAAAATCGCCGTGGAATTTCACTAAAATCCGCATCAAAGCCACCAAATACCTGCTGATTTTCCTTGTCTGCGCGTG
GACGGGCATCACGTTTGCAGGCTGGTTTGTCCCTATCCGCCAGTTCGTTCCCGATTTATTCACTGGAGCAGCAGGCGGCG
GCGCGATGTTTGCCACAGCGTTTTACGGCTTTATGACCTTCTTCTTCGCACATATTATGCGCGAAAAAGTATGCCTGCAT
ATGTGTCCGTATGCACGTTTCCAAAGCGCGATGTTCGACAAGGACACGCTGATTGTTTCTTATGACGCGGAACGCGGCGA
ACCGCGCGGAGCCCGCAAGAAAACGGTCAACAAGGAAGAGGCGGGTTTGGGCGACTGCATCAACTGTGCGATGTGCGTCC
AAGTCTGCCCTGTCGGCATCGACATCCGCAACGGTCTGCAGTACCAATGTATCGGCTGCGCCGCCTGTATCGACGCGTGT
GATGAGATTATGGACAAAATGGGCTATCCGCGCGGATTAATCCGTTATACGACCGAAAGCGCGCTGGAACACGAATATTC
TGAAAAAGACATTAAAAAACGGCTGCTCAGACCGCGTGTGGCAGGTTACGGCGCGGTGTTGGCGTTAGTTATCATTGCCT
TCCTGGCCGGTTTGTCCACGCGCAAAATGGTCGAGGTCGATATTTTGAAAGACCGTGGCGTACTGGTGCGCGAAAACGCC
AAAGGCTGGCTGGAAAACGCATACAGCCTGCGTATCATCAACAAAAGTGAAAAAGAACAGCTCATTACCGCAAGTGTCAA
AGGCTTTGACGAAATCGCCCTGACCGGGCTGCCCGAAGGCGGTATCAAGGTTGCCCCGCGCGAAACGGTAACCCTTCCCG
TCCAAGTGTCCACCATTCCGGAATACGCGGACAAAGGCAGCCACCCTATCGAATTTACCTTCCAATACCGCGAAAGCGGC
GCGCCCGACGGCAAGCCGGTCGTCTTGGAAGAAGATGCAACCTTTATCGGAGAATAA

Upstream 100 bases:

>100_bases
CTTGAAACACAACGCCTTAAAAAACAAGAAAAATGACGTCTGAAAAGCAAACGGCGGCGGTAACGGGCAAACCATCAATC
AAAAATCTAAGGAATGCAGA

Downstream 100 bases:

>100_bases
CCGTGTCTCAAAACACTCCAATCAAACCTTGGTACAAACACGTCTGGCCGTGGATCTTGATGGCGGGGCCGATTTTTGTC
GTCATCGCCAGCGTCGCTAT

Product: ferredoxin, 4Fe-4S type

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 498; Mature: 497

Protein sequence:

>498_residues
MTTENQAGSPASGIGTSEQTKAAPKAKKTFDPRASVIQIHPEGERIHPKKAEGRFAKLRIAAVLATQFVFYVIPWFNWSG
RQAVVFNIPERHFFIFGLSLGVGDLIYLALLLMICAFGLFWWTTIAGRLWCGYSCPQTVYTEIMLWIDNLVEGDRNKRLK
LEKSPWNFTKIRIKATKYLLIFLVCAWTGITFAGWFVPIRQFVPDLFTGAAGGGAMFATAFYGFMTFFFAHIMREKVCLH
MCPYARFQSAMFDKDTLIVSYDAERGEPRGARKKTVNKEEAGLGDCINCAMCVQVCPVGIDIRNGLQYQCIGCAACIDAC
DEIMDKMGYPRGLIRYTTESALEHEYSEKDIKKRLLRPRVAGYGAVLALVIIAFLAGLSTRKMVEVDILKDRGVLVRENA
KGWLENAYSLRIINKSEKEQLITASVKGFDEIALTGLPEGGIKVAPRETVTLPVQVSTIPEYADKGSHPIEFTFQYRESG
APDGKPVVLEEDATFIGE

Sequences:

>Translated_498_residues
MTTENQAGSPASGIGTSEQTKAAPKAKKTFDPRASVIQIHPEGERIHPKKAEGRFAKLRIAAVLATQFVFYVIPWFNWSG
RQAVVFNIPERHFFIFGLSLGVGDLIYLALLLMICAFGLFWWTTIAGRLWCGYSCPQTVYTEIMLWIDNLVEGDRNKRLK
LEKSPWNFTKIRIKATKYLLIFLVCAWTGITFAGWFVPIRQFVPDLFTGAAGGGAMFATAFYGFMTFFFAHIMREKVCLH
MCPYARFQSAMFDKDTLIVSYDAERGEPRGARKKTVNKEEAGLGDCINCAMCVQVCPVGIDIRNGLQYQCIGCAACIDAC
DEIMDKMGYPRGLIRYTTESALEHEYSEKDIKKRLLRPRVAGYGAVLALVIIAFLAGLSTRKMVEVDILKDRGVLVRENA
KGWLENAYSLRIINKSEKEQLITASVKGFDEIALTGLPEGGIKVAPRETVTLPVQVSTIPEYADKGSHPIEFTFQYRESG
APDGKPVVLEEDATFIGE
>Mature_497_residues
TTENQAGSPASGIGTSEQTKAAPKAKKTFDPRASVIQIHPEGERIHPKKAEGRFAKLRIAAVLATQFVFYVIPWFNWSGR
QAVVFNIPERHFFIFGLSLGVGDLIYLALLLMICAFGLFWWTTIAGRLWCGYSCPQTVYTEIMLWIDNLVEGDRNKRLKL
EKSPWNFTKIRIKATKYLLIFLVCAWTGITFAGWFVPIRQFVPDLFTGAAGGGAMFATAFYGFMTFFFAHIMREKVCLHM
CPYARFQSAMFDKDTLIVSYDAERGEPRGARKKTVNKEEAGLGDCINCAMCVQVCPVGIDIRNGLQYQCIGCAACIDACD
EIMDKMGYPRGLIRYTTESALEHEYSEKDIKKRLLRPRVAGYGAVLALVIIAFLAGLSTRKMVEVDILKDRGVLVRENAK
GWLENAYSLRIINKSEKEQLITASVKGFDEIALTGLPEGGIKVAPRETVTLPVQVSTIPEYADKGSHPIEFTFQYRESGA
PDGKPVVLEEDATFIGE

Specific function: Involved in a membrane generated redox signal; required to maintain repression of photosynthesis gene expression in the presence of oxygen [H]

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR014116
- InterPro:   IPR013783 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55626; Mature: 55495

Theoretical pI: Translated: 8.30; Mature: 8.30

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTENQAGSPASGIGTSEQTKAAPKAKKTFDPRASVIQIHPEGERIHPKKAEGRFAKLRI
CCCCCCCCCCCCCCCCCHHHHCCCCHHCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHH
AAVLATQFVFYVIPWFNWSGRQAVVFNIPERHFFIFGLSLGVGDLIYLALLLMICAFGLF
HHHHHHHHHHHEEECCCCCCCEEEEEECCCCEEEEEEEHHCHHHHHHHHHHHHHHHHHHH
WWTTIAGRLWCGYSCPQTVYTEIMLWIDNLVEGDRNKRLKLEKSPWNFTKIRIKATKYLL
HHHHHHHHHEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEEEHHHHHH
IFLVCAWTGITFAGWFVPIRQFVPDLFTGAAGGGAMFATAFYGFMTFFFAHIMREKVCLH
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MCPYARFQSAMFDKDTLIVSYDAERGEPRGARKKTVNKEEAGLGDCINCAMCVQVCPVGI
HCCHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHCCCHHHCCCCHHHHHHHHHHHCCCCE
DIRNGLQYQCIGCAACIDACDEIMDKMGYPRGLIRYTTESALEHEYSEKDIKKRLLRPRV
ECCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHCCHH
AGYGAVLALVIIAFLAGLSTRKMVEVDILKDRGVLVRENAKGWLENAYSLRIINKSEKEQ
CCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEECCCHHHCCCEEEEEECCCCHHH
LITASVKGFDEIALTGLPEGGIKVAPRETVTLPVQVSTIPEYADKGSHPIEFTFQYRESG
HHHHHHCCCCCEEEECCCCCCEEECCCCEEEEEEEECCCCHHHCCCCCCEEEEEEECCCC
APDGKPVVLEEDATFIGE
CCCCCEEEEECCCHHCCC
>Mature Secondary Structure 
TTENQAGSPASGIGTSEQTKAAPKAKKTFDPRASVIQIHPEGERIHPKKAEGRFAKLRI
CCCCCCCCCCCCCCCCHHHHCCCCHHCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHH
AAVLATQFVFYVIPWFNWSGRQAVVFNIPERHFFIFGLSLGVGDLIYLALLLMICAFGLF
HHHHHHHHHHHEEECCCCCCCEEEEEECCCCEEEEEEEHHCHHHHHHHHHHHHHHHHHHH
WWTTIAGRLWCGYSCPQTVYTEIMLWIDNLVEGDRNKRLKLEKSPWNFTKIRIKATKYLL
HHHHHHHHHEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEEEEHHHHHH
IFLVCAWTGITFAGWFVPIRQFVPDLFTGAAGGGAMFATAFYGFMTFFFAHIMREKVCLH
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MCPYARFQSAMFDKDTLIVSYDAERGEPRGARKKTVNKEEAGLGDCINCAMCVQVCPVGI
HCCHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHCCCHHHCCCCHHHHHHHHHHHCCCCE
DIRNGLQYQCIGCAACIDACDEIMDKMGYPRGLIRYTTESALEHEYSEKDIKKRLLRPRV
ECCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHHCCHH
AGYGAVLALVIIAFLAGLSTRKMVEVDILKDRGVLVRENAKGWLENAYSLRIINKSEKEQ
CCHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEECCCHHHCCCEEEEEECCCCHHH
LITASVKGFDEIALTGLPEGGIKVAPRETVTLPVQVSTIPEYADKGSHPIEFTFQYRESG
HHHHHHCCCCCEEEECCCCCCEEECCCCEEEEEEEECCCCHHHCCCCCCEEEEEEECCCC
APDGKPVVLEEDATFIGE
CCCCCEEEEECCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9068641; 7592416 [H]