| Definition | Neisseria meningitidis 053442, complete genome. |
|---|---|
| Accession | NC_010120 |
| Length | 2,153,416 |
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The map label for this gene is 161870291
Identifier: 161870291
GI number: 161870291
Start: 1341835
End: 1343031
Strand: Direct
Name: 161870291
Synonym: NMCC_1333
Alternate gene names: NA
Gene position: 1341835-1343031 (Clockwise)
Preceding gene: 161870290
Following gene: 161870292
Centisome position: 62.31
GC content: 49.71
Gene sequence:
>1197_bases GTGACCGTCGGTTATGGCTTCAGTGCCAGTGGCGATTACAGCCAAAGCAAAATCCGAGCCAATCATGCTTCGGTAACCGA GCAAAGCGGTATTTATGCCGGAGAAGACGGCTATCAAATCAAGGTCGGAAACCATACAGACCTCAAAGGCGGCATCATCA CCAGTACCCAAAGCGCAGAAGACAAGGGTAAAAACCGATTCAGCACAGGCACACTCGCCGGCAGTGATATTCAAAATTAC AGCCAATACGAAGGAAAAAGTTTTGGATTGGGCGCAAGTGCGTCCATAAGCGGCAAAACACTGGGACAGGGCGCACAAAA TAAGCCTCAAAACAAACACCTGACAAGCGTGGCCGATAAAAACGGCGCAAGTTCATCAGTAGGCTACGGCAGCGACAGCG ACAGCGACAGCCAAAGCAGCATCACAAAAAGCGGCATCAATACCCAAAACATTCAAATCACCGACGAAGCCGCACAAATC CGGCTGACAGGAAAAACAGCGGCACAAACCAAAGCCGATATTGATACAAACGTAACCACAGACACCGCCGAACGACATTC GGGCAGCCTGAAAAACGTATTTGACAAAGATAGAGTGCAAAGTGAACTGGATTTACAAAGAACCGTCAGCCAAGATTTTA GTAAAAATGTTCAACAAGCCAATACCGAGATTAACCAACATTTAGACAAACTCAAAGCAGACAAAGAAGCAGCCGAAACA GCAGCAGCCGAGGCATTAGCCAATGGCGATATGGAAACTGCCAAACACAAAGCCCATGAAGCTCAAGATGCGGCAGCAAA AGCAGATAATTGGCAACAAGGCAAAGTCATTCTCAACATGTTAGCCTCAGGTTTAGCTGCGCCGACCCAAAGCGGAGCGG GCATCGCTGCGGCTACCGCATCGCCAGCCGTATCGTATGCGATTGGACAGCACTTTAAAGATTTAGCCGGTCAAAACGCG AATGGCAAACTAACCGCCAGTCAAGAAACCGCTCACGTTCTTGCCCACGCGGTATTAGGAGCAGCGGTTGCAGCAGCAGG AGGCAACAATGCCCCGGCGGGAGCATTGAGTGCGGGCGGGTCGGAAGCGGCTGCGCCTTACATCAGCAAATGGTTATATG GCAAAGAAAAAGGAAGTGACTTAACGGCGGAAGAGAAAGAGACTGAGACCTTTGCAAAATTCCCCAAAATCCCCTAA
Upstream 100 bases:
>100_bases ACGCGGCAAAGGCGTACAAGTCAATGCCAAAAACCTAAGTATTCAAAGCGTACAAGATAGCGAAACCTATCAAAGCAAAC AACAAAACGCCAGTGCACAA
Downstream 100 bases:
>100_bases ATTCCCACCAAGACATTTAGGAGATTTCTCATGAGCACCTTCTTCCAGCAAACCGCCCAAGCCATGATTGCCAAACACAT CGACCGTTTCCCGCTATTGA
Product: PspA-related protein
Products: NA
Alternate protein names: Filamentous Hemagglutinin Family Outer Membrane Protein; Hemagglutinin/Hemolysin-Related Protein; Filamentous Haemagglutinin Outer Membrane Protein; Adhesin; Filamentous Haemagglutinin; Filamentous Hemagglutinin Outer Membrane Protein; Hemolysin/Hemagglutinin-Like Protein; Contact-Dependent Inhibitor A; Large Exoprotein Involved In Heme Utilization Or Adhesion; Adhesin HecA Family; Hemagglutinin; Filamentous Hemagglutinin/Adhesin; Filamentous Haemagglutinin N-TerminalAdhesin HecA; Adhesin/Hemolysin; Adhesin/Hemagglutinin; Contact-Dependent Inhibition Of Growth Factor CdiA; Large Exoprotein Involved In Heme Utilizationor Adhesion; Exoprotein Adhesin Or Hemolysin; Surface Adhesin; Filamentous Haemagglutinin Adhesin HecA; Hemolysin; Hemolysin/Hemagglutinin-Like Protein HecA; Haemolysin/Haemagglutinin; Adhesin/Hemolysin Adhesin HecA; PspA-Related Protein; Filamentous Hemagglutinin Protein; Filamentous Hemagglutinin / Adhesin; Hemagglutinin-Like Protein; Haemagglutinin/Haemolysin-Related Protein; Fimbrial Adhesin; FHA-Like Protein; Hemagglutinin-Like Secreted Protein
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MTVGYGFSASGDYSQSKIRANHASVTEQSGIYAGEDGYQIKVGNHTDLKGGIITSTQSAEDKGKNRFSTGTLAGSDIQNY SQYEGKSFGLGASASISGKTLGQGAQNKPQNKHLTSVADKNGASSSVGYGSDSDSDSQSSITKSGINTQNIQITDEAAQI RLTGKTAAQTKADIDTNVTTDTAERHSGSLKNVFDKDRVQSELDLQRTVSQDFSKNVQQANTEINQHLDKLKADKEAAET AAAEALANGDMETAKHKAHEAQDAAAKADNWQQGKVILNMLASGLAAPTQSGAGIAAATASPAVSYAIGQHFKDLAGQNA NGKLTASQETAHVLAHAVLGAAVAAAGGNNAPAGALSAGGSEAAAPYISKWLYGKEKGSDLTAEEKETETFAKFPKIP
Sequences:
>Translated_398_residues MTVGYGFSASGDYSQSKIRANHASVTEQSGIYAGEDGYQIKVGNHTDLKGGIITSTQSAEDKGKNRFSTGTLAGSDIQNY SQYEGKSFGLGASASISGKTLGQGAQNKPQNKHLTSVADKNGASSSVGYGSDSDSDSQSSITKSGINTQNIQITDEAAQI RLTGKTAAQTKADIDTNVTTDTAERHSGSLKNVFDKDRVQSELDLQRTVSQDFSKNVQQANTEINQHLDKLKADKEAAET AAAEALANGDMETAKHKAHEAQDAAAKADNWQQGKVILNMLASGLAAPTQSGAGIAAATASPAVSYAIGQHFKDLAGQNA NGKLTASQETAHVLAHAVLGAAVAAAGGNNAPAGALSAGGSEAAAPYISKWLYGKEKGSDLTAEEKETETFAKFPKIP >Mature_397_residues TVGYGFSASGDYSQSKIRANHASVTEQSGIYAGEDGYQIKVGNHTDLKGGIITSTQSAEDKGKNRFSTGTLAGSDIQNYS QYEGKSFGLGASASISGKTLGQGAQNKPQNKHLTSVADKNGASSSVGYGSDSDSDSQSSITKSGINTQNIQITDEAAQIR LTGKTAAQTKADIDTNVTTDTAERHSGSLKNVFDKDRVQSELDLQRTVSQDFSKNVQQANTEINQHLDKLKADKEAAETA AAEALANGDMETAKHKAHEAQDAAAKADNWQQGKVILNMLASGLAAPTQSGAGIAAATASPAVSYAIGQHFKDLAGQNAN GKLTASQETAHVLAHAVLGAAVAAAGGNNAPAGALSAGGSEAAAPYISKWLYGKEKGSDLTAEEKETETFAKFPKIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41158; Mature: 41027
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVGYGFSASGDYSQSKIRANHASVTEQSGIYAGEDGYQIKVGNHTDLKGGIITSTQSAE CEECCCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCCCEEEECCCCCCCCCEEECCCCHH DKGKNRFSTGTLAGSDIQNYSQYEGKSFGLGASASISGKTLGQGAQNKPQNKHLTSVADK HHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHCC NGASSSVGYGSDSDSDSQSSITKSGINTQNIQITDEAAQIRLTGKTAAQTKADIDTNVTT CCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCEEEEEECCHHHHHHCCCCCCCCC DTAERHSGSLKNVFDKDRVQSELDLQRTVSQDFSKNVQQANTEINQHLDKLKADKEAAET CCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAAEALANGDMETAKHKAHEAQDAAAKADNWQQGKVILNMLASGLAAPTQSGAGIAAATA HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECC SPAVSYAIGQHFKDLAGQNANGKLTASQETAHVLAHAVLGAAVAAAGGNNAPAGALSAGG CCHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC SEAAAPYISKWLYGKEKGSDLTAEEKETETFAKFPKIP CHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCC >Mature Secondary Structure TVGYGFSASGDYSQSKIRANHASVTEQSGIYAGEDGYQIKVGNHTDLKGGIITSTQSAE EECCCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCCCEEEECCCCCCCCCEEECCCCHH DKGKNRFSTGTLAGSDIQNYSQYEGKSFGLGASASISGKTLGQGAQNKPQNKHLTSVADK HHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHHHHCC NGASSSVGYGSDSDSDSQSSITKSGINTQNIQITDEAAQIRLTGKTAAQTKADIDTNVTT CCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCEEEEEECCHHHHHHCCCCCCCCC DTAERHSGSLKNVFDKDRVQSELDLQRTVSQDFSKNVQQANTEINQHLDKLKADKEAAET CCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAAEALANGDMETAKHKAHEAQDAAAKADNWQQGKVILNMLASGLAAPTQSGAGIAAATA HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECC SPAVSYAIGQHFKDLAGQNANGKLTASQETAHVLAHAVLGAAVAAAGGNNAPAGALSAGG CCHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC SEAAAPYISKWLYGKEKGSDLTAEEKETETFAKFPKIP CHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA