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The map label for this gene is insH1 [C]

Identifier: 161870289

GI number: 161870289

Start: 1338321

End: 1339328

Strand: Reverse

Name: insH1 [C]

Synonym: NMCC_1330

Alternate gene names: 161870289

Gene position: 1339328-1338321 (Counterclockwise)

Preceding gene: 161870293

Following gene: 161870286

Centisome position: 62.2

GC content: 52.58

Gene sequence:

>1008_bases
ATGAGCACCTTCTTTCAGCAAACCGCACAAGCCATGATTGCCAAACACATCGACCGCTTCCCACTATTGAAGCTAGATCA
AGTGATTGATTGGCAACCGATCGAACAATACCTGAACCGTCAAAGAATCCGTTACCTCCGAGACCACCGCGGCCGTCCCG
CCTATCCGCTGCTATCCATGTTCAAAACCGTCCTGCTCGGACAATGGCACAGCCTCTCCGATCCCGAACTCGAACACAGC
CTCATCACCCGCATCGATTTCAACCTGTTTTGCCGTTTTGACGAACTGAGCATCCCCGATTACAGCACCTTATGCCGCTA
CCGCAACTGGCTGGCGCAAGACGATACCCTGTCCGAATTGCTCAAACTGATCAACCGCCAACTGACCGAAAAAGGTTTAA
AAATAGAGAAAGCATCCGCCGCCGTCGTTGACGCCACCATTATTCAGACCGCCGGCAGCAAACAGCGTCAGGCCATAGAA
GTCGATGAAGAAGGACAAATCAACGGCCAAACCACACCGAGTAAAGACAAAGATGCCCGTTGGATCAAGAAAAACGGCCT
CTACAAACTCGGTTACAAACAACATACCCGTACCGATGCGGAAGGCTATATCGAGAAACTGCACATTACTCCCGCCAATG
CCCATGAGTGCAAACACCTGTCGCCTTTGCTGGAAGGGATAGCCGAAGGTACGACCGTCTATGCCGACAAAGGCTATGAC
AGTGCGGAAAACCGGCAACATCTGGAAGAACATCAGTTGCTGGACGGCATTATGCGCAAAGCCTGCCGCAACCGTCCGCT
GTCGGAAGCGCAAACCAAACGCAACCGATATTTGTCGAAGCCCCGTTATGTGGTCGAACAAAGCTTCGGTACGCTGCACC
GTAAATTCCGCTACGCTCGGGCAGCCTATTTCGGACTGATTAAAGTGAGTGCGCAAAGCCACCTGAAGGCGATGTGTTTG
AACCTGTTGAAAGCGGCCAACAGGCTAAGTGCGCCCGCTGCCGCCTAA

Upstream 100 bases:

>100_bases
GAATTTGGTCTGATCGTTTTAAAACCAATTTGTAAGTTGAGACCTTTGCAAAATCCCCAAAATCCCCTAAATTCCCACCA
AGACATTTAGGGGATTTTCC

Downstream 100 bases:

>100_bases
AAGGCAGCCTGGATGCCTGATTATCGGGTATCCGGGGAGGATTAAGGGGGTATTTGGGTAAAATTAGGAGGTATTTGGGG
CGAAAACAGCCGAAAACCTG

Product: IS1106A3 transposase

Products: NA

Alternate protein names: ORF 1 [H]

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:

>335_residues
MSTFFQQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQRIRYLRDHRGRPAYPLLSMFKTVLLGQWHSLSDPELEHS
LITRIDFNLFCRFDELSIPDYSTLCRYRNWLAQDDTLSELLKLINRQLTEKGLKIEKASAAVVDATIIQTAGSKQRQAIE
VDEEGQINGQTTPSKDKDARWIKKNGLYKLGYKQHTRTDAEGYIEKLHITPANAHECKHLSPLLEGIAEGTTVYADKGYD
SAENRQHLEEHQLLDGIMRKACRNRPLSEAQTKRNRYLSKPRYVVEQSFGTLHRKFRYARAAYFGLIKVSAQSHLKAMCL
NLLKAANRLSAPAAA

Sequences:

>Translated_335_residues
MSTFFQQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQRIRYLRDHRGRPAYPLLSMFKTVLLGQWHSLSDPELEHS
LITRIDFNLFCRFDELSIPDYSTLCRYRNWLAQDDTLSELLKLINRQLTEKGLKIEKASAAVVDATIIQTAGSKQRQAIE
VDEEGQINGQTTPSKDKDARWIKKNGLYKLGYKQHTRTDAEGYIEKLHITPANAHECKHLSPLLEGIAEGTTVYADKGYD
SAENRQHLEEHQLLDGIMRKACRNRPLSEAQTKRNRYLSKPRYVVEQSFGTLHRKFRYARAAYFGLIKVSAQSHLKAMCL
NLLKAANRLSAPAAA
>Mature_334_residues
STFFQQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQRIRYLRDHRGRPAYPLLSMFKTVLLGQWHSLSDPELEHSL
ITRIDFNLFCRFDELSIPDYSTLCRYRNWLAQDDTLSELLKLINRQLTEKGLKIEKASAAVVDATIIQTAGSKQRQAIEV
DEEGQINGQTTPSKDKDARWIKKNGLYKLGYKQHTRTDAEGYIEKLHITPANAHECKHLSPLLEGIAEGTTVYADKGYDS
AENRQHLEEHQLLDGIMRKACRNRPLSEAQTKRNRYLSKPRYVVEQSFGTLHRKFRYARAAYFGLIKVSAQSHLKAMCLN
LLKAANRLSAPAAA

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3039

COG function: function code L; Transposase and inactivated derivatives, IS5 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 11 family [H]

Homologues:

Organism=Escherichia coli, GI1788303, Length=313, Percent_Identity=28.7539936102236, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1789921, Length=313, Percent_Identity=28.7539936102236, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1789612, Length=313, Percent_Identity=28.7539936102236, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1789355, Length=313, Percent_Identity=28.7539936102236, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1788518, Length=313, Percent_Identity=28.7539936102236, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1788342, Length=313, Percent_Identity=28.7539936102236, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1787592, Length=313, Percent_Identity=28.7539936102236, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1786877, Length=313, Percent_Identity=28.7539936102236, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1786764, Length=313, Percent_Identity=28.7539936102236, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1786453, Length=313, Percent_Identity=28.7539936102236, Blast_Score=110, Evalue=1e-25,
Organism=Escherichia coli, GI1787634, Length=313, Percent_Identity=28.1150159744409, Blast_Score=107, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002559 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 38569; Mature: 38437

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTFFQQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQRIRYLRDHRGRPAYPLLSM
CCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
FKTVLLGQWHSLSDPELEHSLITRIDFNLFCRFDELSIPDYSTLCRYRNWLAQDDTLSEL
HHHHHHCCCCCCCCCHHHHHHHHHHCHHHEEEECCCCCCCHHHHHHHHHHCCCCHHHHHH
LKLINRQLTEKGLKIEKASAAVVDATIIQTAGSKQRQAIEVDEEGQINGQTTPSKDKDAR
HHHHHHHHHHHCCCEEHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCHH
WIKKNGLYKLGYKQHTRTDAEGYIEKLHITPANAHECKHLSPLLEGIAEGTTVYADKGYD
HHHHCCCEECCCHHHCCCCHHHHHHHEECCCCCHHHHHHHHHHHHHHHCCCEEEECCCCC
SAENRQHLEEHQLLDGIMRKACRNRPLSEAQTKRNRYLSKPRYVVEQSFGTLHRKFRYAR
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
AAYFGLIKVSAQSHLKAMCLNLLKAANRLSAPAAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
STFFQQTAQAMIAKHIDRFPLLKLDQVIDWQPIEQYLNRQRIRYLRDHRGRPAYPLLSM
CHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
FKTVLLGQWHSLSDPELEHSLITRIDFNLFCRFDELSIPDYSTLCRYRNWLAQDDTLSEL
HHHHHHCCCCCCCCCHHHHHHHHHHCHHHEEEECCCCCCCHHHHHHHHHHCCCCHHHHHH
LKLINRQLTEKGLKIEKASAAVVDATIIQTAGSKQRQAIEVDEEGQINGQTTPSKDKDAR
HHHHHHHHHHHCCCEEHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCHH
WIKKNGLYKLGYKQHTRTDAEGYIEKLHITPANAHECKHLSPLLEGIAEGTTVYADKGYD
HHHHCCCEECCCHHHCCCCHHHHHHHEECCCCCHHHHHHHHHHHHHHHCCCEEEECCCCC
SAENRQHLEEHQLLDGIMRKACRNRPLSEAQTKRNRYLSKPRYVVEQSFGTLHRKFRYAR
CHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
AAYFGLIKVSAQSHLKAMCLNLLKAANRLSAPAAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1320728 [H]