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The map label for this gene is 161870277

Identifier: 161870277

GI number: 161870277

Start: 1321378

End: 1322031

Strand: Reverse

Name: 161870277

Synonym: NMCC_1318

Alternate gene names: NA

Gene position: 1322031-1321378 (Counterclockwise)

Preceding gene: 229597119

Following gene: 161870276

Centisome position: 61.39

GC content: 47.25

Gene sequence:

>654_bases
ATGAAGATAACGCACTGCAAATTAAAGAAAAAAGTACAGAAAGAACTGCTCCGTTTTTTTGTGCTGGAAGTTACCGCCCG
TTCTGCCGCCGATATTTTGGGTATCCATCCCAATTCGGCAGTACTGTTCTACCGTAAAATCCGCACGGTTATCAACCATC
ATTTGGCCTTGGCTGCCGATGAGGTTTTTGAGGGCCCTGTCGAGCCGGACGAAAGCGATTTCGGCGGACGGCGTAAAGGC
AGACGTGGTCGCGGTGCGGCAGGAAAAGTGGTTGTCTTCGGCATTCTGAAACGCAACGGACGGGTCTATACCGTTGTGGT
GGATAATGCCAAGTCTGAAACGTTACTCCCTGTCATCAAGAAGAAAATCATGCCGGACAGCATTGTTTATACCGATAGTC
TGAGCAGCTGCGACAAGTTGGACGTGAGCGGTTTTATCCATTACCGCATCAACCATTCCAAGGAATTTGCAGACCGTCAA
AACCACATTAACGGCATTGAGAACTTTTGGAATCAGGCAAAACGCGTCTTGCGCAAATACAACGAAATTGATCGTAAATC
TTTCCCGCTGTTCTTGAAAGAATGCAAATTTCGGTTTAACTTCGGCACACCGTCCCGACAGCTAAAAATTTTGCGGGATT
GGTGTGGAATTTAG

Upstream 100 bases:

>100_bases
TTACCTTTACAAAGCCTATACGTATCCTTACAATTTGTTTTGCTGTTTTTGGTATATTTTTGGGGCTGTACTAGATTAGC
AGATATGTTACCCTCGAAAT

Downstream 100 bases:

>100_bases
GGCTAATCTAGTACAGCCCCCTTATTTTTTAAGGTTTTGTACTTTATCTTAAGCATCCCAACTCAGCTTGAAACTATAAA
ACCGCGTGTCTACCTGCCGA

Product: IS1016C2 transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MKITHCKLKKKVQKELLRFFVLEVTARSAADILGIHPNSAVLFYRKIRTVINHHLALAADEVFEGPVEPDESDFGGRRKG
RRGRGAAGKVVVFGILKRNGRVYTVVVDNAKSETLLPVIKKKIMPDSIVYTDSLSSCDKLDVSGFIHYRINHSKEFADRQ
NHINGIENFWNQAKRVLRKYNEIDRKSFPLFLKECKFRFNFGTPSRQLKILRDWCGI

Sequences:

>Translated_217_residues
MKITHCKLKKKVQKELLRFFVLEVTARSAADILGIHPNSAVLFYRKIRTVINHHLALAADEVFEGPVEPDESDFGGRRKG
RRGRGAAGKVVVFGILKRNGRVYTVVVDNAKSETLLPVIKKKIMPDSIVYTDSLSSCDKLDVSGFIHYRINHSKEFADRQ
NHINGIENFWNQAKRVLRKYNEIDRKSFPLFLKECKFRFNFGTPSRQLKILRDWCGI
>Mature_217_residues
MKITHCKLKKKVQKELLRFFVLEVTARSAADILGIHPNSAVLFYRKIRTVINHHLALAADEVFEGPVEPDESDFGGRRKG
RRGRGAAGKVVVFGILKRNGRVYTVVVDNAKSETLLPVIKKKIMPDSIVYTDSLSSCDKLDVSGFIHYRINHSKEFADRQ
NHINGIENFWNQAKRVLRKYNEIDRKSFPLFLKECKFRFNFGTPSRQLKILRDWCGI

Specific function: Unknown

COG id: COG3676

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To insertion element IS1016 transposase [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24974; Mature: 24974

Theoretical pI: Translated: 10.63; Mature: 10.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKITHCKLKKKVQKELLRFFVLEVTARSAADILGIHPNSAVLFYRKIRTVINHHLALAAD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHH
EVFEGPVEPDESDFGGRRKGRRGRGAAGKVVVFGILKRNGRVYTVVVDNAKSETLLPVIK
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEECCCCCCHHHHHHH
KKIMPDSIVYTDSLSSCDKLDVSGFIHYRINHSKEFADRQNHINGIENFWNQAKRVLRKY
HHCCCCCEEEECCCCCCCCCCCCEEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHH
NEIDRKSFPLFLKECKFRFNFGTPSRQLKILRDWCGI
HHHCCCCCCHHHHHCCEEECCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MKITHCKLKKKVQKELLRFFVLEVTARSAADILGIHPNSAVLFYRKIRTVINHHLALAAD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHH
EVFEGPVEPDESDFGGRRKGRRGRGAAGKVVVFGILKRNGRVYTVVVDNAKSETLLPVIK
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCEEEEEEECCCCCCHHHHHHH
KKIMPDSIVYTDSLSSCDKLDVSGFIHYRINHSKEFADRQNHINGIENFWNQAKRVLRKY
HHCCCCCEEEECCCCCCCCCCCCEEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHH
NEIDRKSFPLFLKECKFRFNFGTPSRQLKILRDWCGI
HHHCCCCCCHHHHHCCEEECCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]