Click here to switch to the map view.

The map label for this gene is insH1 [C]

Identifier: 161870274

GI number: 161870274

Start: 1317110

End: 1317865

Strand: Reverse

Name: insH1 [C]

Synonym: NMCC_1315

Alternate gene names: 161870274

Gene position: 1317865-1317110 (Counterclockwise)

Preceding gene: 161870275

Following gene: 161870269

Centisome position: 61.2

GC content: 49.6

Gene sequence:

>756_bases
TTGCTCAAACTGATTAACCGACAACTGACCGAAAAAGGCCTAAAAGTAGAGAAAGCATCCGCCGCTGTCGTTGATGCCAC
CATTATTCAGACCGCCGGCAGCAAACAGCGTCAGACCATAGAAGTTGACGAAGAAGGACAAATCAGCGGACAAACCACAC
CGAGCAAAGACAAAGATGCCCGTTGGATAAAGAAAAACGGCCTCTACAAACTCGGTTACAAACAACATACCCGTACCGAT
GCAGAAGGCTATATCGAGAAACTGCACATTACTCCCGCCAATGCCCATGAGTGCAAACACCTGTCGCCGTTGTTGGAAGG
TCTGCCCAAAGGTACGACCGTCTATGCCGACAAAGGCTATGACAGTAAGGAAAACCGGCAGCATCTGAAAGAACATCAGT
TGTTAGACGGCATTATGCGCAAAGCCTGCCGCAACCGTCCGCTGACGGAAGTGCAAACCAAACGCAACCGGTATTTGTCG
AAGACCCATTATAGTGGATTAAATTTAAATCAGGACAAGGCGACGAAGCCGCAGACAGTACAAATAGTACGGCAAGGCGA
GGCAACGCCGTACTGGTTTAAATTTAATCCACTATATGTGGTCGAACAGAGCTTCGGTACGCTGCACCGTAAATTCCGCT
ATGCGCGGGCAGCCTATTTCGGACTGATTAAAGTGAGTGCGCAAAGCCATCTGAAGGCGATGTGTTTGAACCTGTTGAAA
GCGGCCAACAGGTTAAGTGCGCCCGCTGCCGCCTAA

Upstream 100 bases:

>100_bases
ATCACCCGCATCGACTTCAACCTGTTTTGCCGCTTTGACGAACTGAGCATCCCCGATTACAGCACCTTGTGCCGCTACCG
CAACTGGCACCCTGTCCGAA

Downstream 100 bases:

>100_bases
AAGGCAGCCCGGATGCCTGATTATCGGGTATCCGGGGATTAAGGGGGTATTTGGGTAGAATTAGGGAGTGATTGGTAGCG
AAAACAGCTGAAAACCTGTG

Product: putative insertion element IS1106 transposase

Products: NA

Alternate protein names: ORF 1 [H]

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MLKLINRQLTEKGLKVEKASAAVVDATIIQTAGSKQRQTIEVDEEGQISGQTTPSKDKDARWIKKNGLYKLGYKQHTRTD
AEGYIEKLHITPANAHECKHLSPLLEGLPKGTTVYADKGYDSKENRQHLKEHQLLDGIMRKACRNRPLTEVQTKRNRYLS
KTHYSGLNLNQDKATKPQTVQIVRQGEATPYWFKFNPLYVVEQSFGTLHRKFRYARAAYFGLIKVSAQSHLKAMCLNLLK
AANRLSAPAAA

Sequences:

>Translated_251_residues
MLKLINRQLTEKGLKVEKASAAVVDATIIQTAGSKQRQTIEVDEEGQISGQTTPSKDKDARWIKKNGLYKLGYKQHTRTD
AEGYIEKLHITPANAHECKHLSPLLEGLPKGTTVYADKGYDSKENRQHLKEHQLLDGIMRKACRNRPLTEVQTKRNRYLS
KTHYSGLNLNQDKATKPQTVQIVRQGEATPYWFKFNPLYVVEQSFGTLHRKFRYARAAYFGLIKVSAQSHLKAMCLNLLK
AANRLSAPAAA
>Mature_251_residues
MLKLINRQLTEKGLKVEKASAAVVDATIIQTAGSKQRQTIEVDEEGQISGQTTPSKDKDARWIKKNGLYKLGYKQHTRTD
AEGYIEKLHITPANAHECKHLSPLLEGLPKGTTVYADKGYDSKENRQHLKEHQLLDGIMRKACRNRPLTEVQTKRNRYLS
KTHYSGLNLNQDKATKPQTVQIVRQGEATPYWFKFNPLYVVEQSFGTLHRKFRYARAAYFGLIKVSAQSHLKAMCLNLLK
AANRLSAPAAA

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3039

COG function: function code L; Transposase and inactivated derivatives, IS5 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 11 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002559 [H]

Pfam domain/function: PF01609 Transposase_11 [H]

EC number: NA

Molecular weight: Translated: 28389; Mature: 28389

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKLINRQLTEKGLKVEKASAAVVDATIIQTAGSKQRQTIEVDEEGQISGQTTPSKDKDA
CCCHHHHHHHHHCCEEEHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCC
RWIKKNGLYKLGYKQHTRTDAEGYIEKLHITPANAHECKHLSPLLEGLPKGTTVYADKGY
HHHHHCCCEECCCCCCCCCCHHHHHEEEECCCCCHHHHHHHHHHHHCCCCCCEEEECCCC
DSKENRQHLKEHQLLDGIMRKACRNRPLTEVQTKRNRYLSKTHYSGLNLNQDKATKPQTV
CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH
QIVRQGEATPYWFKFNPLYVVEQSFGTLHRKFRYARAAYFGLIKVSAQSHLKAMCLNLLK
HHEECCCCCEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AANRLSAPAAA
HHHHCCCCCCC
>Mature Secondary Structure
MLKLINRQLTEKGLKVEKASAAVVDATIIQTAGSKQRQTIEVDEEGQISGQTTPSKDKDA
CCCHHHHHHHHHCCEEEHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCCC
RWIKKNGLYKLGYKQHTRTDAEGYIEKLHITPANAHECKHLSPLLEGLPKGTTVYADKGY
HHHHHCCCEECCCCCCCCCCHHHHHEEEECCCCCHHHHHHHHHHHHCCCCCCEEEECCCC
DSKENRQHLKEHQLLDGIMRKACRNRPLTEVQTKRNRYLSKTHYSGLNLNQDKATKPQTV
CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH
QIVRQGEATPYWFKFNPLYVVEQSFGTLHRKFRYARAAYFGLIKVSAQSHLKAMCLNLLK
HHEECCCCCEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AANRLSAPAAA
HHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1320728 [H]