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The map label for this gene is ycgM [H]

Identifier: 161870211

GI number: 161870211

Start: 1244580

End: 1245236

Strand: Reverse

Name: ycgM [H]

Synonym: NMCC_1251

Alternate gene names: 161870211

Gene position: 1245236-1244580 (Counterclockwise)

Preceding gene: 161870212

Following gene: 161870207

Centisome position: 57.83

GC content: 52.36

Gene sequence:

>657_bases
GTGGCTTCAGTATTTTTAGAAGGAGAAGCAGTCGAGGTCGGTAATATTTTCTGTATCGGCAGGAACTATGCCGCCCATAT
CGAAGAGTTAAAAAACGAAATACCTTCCGAACCTGTGGTGTTTATGAAGCCGTCAGGCAGCATTTTGAATAGCGGCGGTA
CAATCTTGCTGCCCGAGTTTAGTAGGGATGTGCAGTTTGAGTGCGAACTCGTGTTGCTGGTCGGTAAGGATTCAGACGGC
ATGGGCGAGGGTAAAGATATTTTGGGATGTGTGGCGGGGTACGGCGTGGGTTTGGATTTGACCGCGCGAGACATCCAATG
CCGTCTGAAGGCGCAGGGGCTGCCCTGGCTGAAGGCAAAAGGGTTCAGGCATTCCGCGTGCGTGTCGGATTTTGCGGCGG
CAGGCAGAATCGGCAATCCCGAGAAGATGTTGTTTTCATTAAAACAAAACGGCGTATTGAAACAGCGCGGGGATACCGGT
TTGATGATTTACCCGATTCGGGAAATTTTACACAAACTGGCGGCAGATTACGGTTTGGGGAAAGGGGATTTGGTGTTTAC
CGGAACGCCCTCCGGCGTGGGCGCAATCGGTGCGGGGGACAATTTGGCATTGGAGCTGGACGGCTTGGTGCACGCCTCTT
TCACGGTAGGGTGTTAA

Upstream 100 bases:

>100_bases
AAATTGTTGCGCGTGTAACAGCTTCATTAAATGCGTAAGCTTGGTCAAATGCTGTCTGAAAATAATTTCAGACGGCATTT
TTATTTGGGGAGAAAGTGAA

Downstream 100 bases:

>100_bases
CCGCGCCGCTTAACCCTCACGCCCGTTGAAACATTCCGCCGGACCGCCCTCGAAAAAACCGTGCAAGATGGCTTGCGCCG
CCACTTGGTCGAGCACCGAT

Product: hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MASVFLEGEAVEVGNIFCIGRNYAAHIEELKNEIPSEPVVFMKPSGSILNSGGTILLPEFSRDVQFECELVLLVGKDSDG
MGEGKDILGCVAGYGVGLDLTARDIQCRLKAQGLPWLKAKGFRHSACVSDFAAAGRIGNPEKMLFSLKQNGVLKQRGDTG
LMIYPIREILHKLAADYGLGKGDLVFTGTPSGVGAIGAGDNLALELDGLVHASFTVGC

Sequences:

>Translated_218_residues
MASVFLEGEAVEVGNIFCIGRNYAAHIEELKNEIPSEPVVFMKPSGSILNSGGTILLPEFSRDVQFECELVLLVGKDSDG
MGEGKDILGCVAGYGVGLDLTARDIQCRLKAQGLPWLKAKGFRHSACVSDFAAAGRIGNPEKMLFSLKQNGVLKQRGDTG
LMIYPIREILHKLAADYGLGKGDLVFTGTPSGVGAIGAGDNLALELDGLVHASFTVGC
>Mature_217_residues
ASVFLEGEAVEVGNIFCIGRNYAAHIEELKNEIPSEPVVFMKPSGSILNSGGTILLPEFSRDVQFECELVLLVGKDSDGM
GEGKDILGCVAGYGVGLDLTARDIQCRLKAQGLPWLKAKGFRHSACVSDFAAAGRIGNPEKMLFSLKQNGVLKQRGDTGL
MIYPIREILHKLAADYGLGKGDLVFTGTPSGVGAIGAGDNLALELDGLVHASFTVGC

Specific function: Unknown

COG id: COG0179

COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAH family [H]

Homologues:

Organism=Homo sapiens, GI13654274, Length=202, Percent_Identity=40.5940594059406, Blast_Score=163, Evalue=8e-41,
Organism=Homo sapiens, GI215422413, Length=199, Percent_Identity=40.2010050251256, Blast_Score=158, Evalue=3e-39,
Organism=Homo sapiens, GI66348062, Length=195, Percent_Identity=40.5128205128205, Blast_Score=158, Evalue=4e-39,
Organism=Homo sapiens, GI156231349, Length=204, Percent_Identity=28.921568627451, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI40786394, Length=204, Percent_Identity=27.9411764705882, Blast_Score=96, Evalue=3e-20,
Organism=Escherichia coli, GI1787428, Length=197, Percent_Identity=39.0862944162437, Blast_Score=146, Evalue=8e-37,
Organism=Caenorhabditis elegans, GI17557057, Length=201, Percent_Identity=35.8208955223881, Blast_Score=127, Evalue=4e-30,
Organism=Saccharomyces cerevisiae, GI6324161, Length=235, Percent_Identity=35.3191489361702, Blast_Score=131, Evalue=7e-32,
Organism=Drosophila melanogaster, GI28571789, Length=201, Percent_Identity=35.3233830845771, Blast_Score=119, Evalue=1e-27,
Organism=Drosophila melanogaster, GI28572127, Length=191, Percent_Identity=29.8429319371728, Blast_Score=84, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002529
- InterPro:   IPR011234 [H]

Pfam domain/function: PF01557 FAA_hydrolase [H]

EC number: NA

Molecular weight: Translated: 23044; Mature: 22913

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASVFLEGEAVEVGNIFCIGRNYAAHIEELKNEIPSEPVVFMKPSGSILNSGGTILLPEF
CCEEEECCCEEEECCEEEECCCHHHHHHHHHHHCCCCCEEEECCCCCEECCCCEEEEECC
SRDVQFECELVLLVGKDSDGMGEGKDILGCVAGYGVGLDLTARDIQCRLKAQGLPWLKAK
CCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEECCEEEEEEECCCCEECCC
GFRHSACVSDFAAAGRIGNPEKMLFSLKQNGVLKQRGDTGLMIYPIREILHKLAADYGLG
CCCCHHHHHHHHHCCCCCCHHHHHEEHHHCCEEEECCCCCEEEEEHHHHHHHHHHHCCCC
KGDLVFTGTPSGVGAIGAGDNLALELDGLVHASFTVGC
CCCEEEEECCCCCEEECCCCCEEEEECCEEEEEEEECC
>Mature Secondary Structure 
ASVFLEGEAVEVGNIFCIGRNYAAHIEELKNEIPSEPVVFMKPSGSILNSGGTILLPEF
CEEEECCCEEEECCEEEECCCHHHHHHHHHHHCCCCCEEEECCCCCEECCCCEEEEECC
SRDVQFECELVLLVGKDSDGMGEGKDILGCVAGYGVGLDLTARDIQCRLKAQGLPWLKAK
CCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEECCEEEEEEECCCCEECCC
GFRHSACVSDFAAAGRIGNPEKMLFSLKQNGVLKQRGDTGLMIYPIREILHKLAADYGLG
CCCCHHHHHHHHHCCCCCCHHHHHEEHHHCCEEEECCCCCEEEEEHHHHHHHHHHHCCCC
KGDLVFTGTPSGVGAIGAGDNLALELDGLVHASFTVGC
CCCEEEEECCCCCEEECCCCCEEEEECCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 10806384 [H]