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The map label for this gene is tig [H]

Identifier: 161870185

GI number: 161870185

Start: 1218065

End: 1219375

Strand: Reverse

Name: tig [H]

Synonym: NMCC_1225

Alternate gene names: 161870185

Gene position: 1219375-1218065 (Counterclockwise)

Preceding gene: 161870186

Following gene: 161870184

Centisome position: 56.63

GC content: 48.74

Gene sequence:

>1311_bases
ATGAGCGTAACTGTTGAAACTTTAGAAAATCTGGAACGCAAAGTAGTGTTGTCCCTGCCTTGGTCCGAAATCAACGCAGA
AACCGATAAAAAACTGAAACAAACCCAACGCCGTGCAAAAATCGACGGTTTCCGTCCGGGTAAAGCACCTTTAAAAATGA
TTGCCCAAATGTACGGTGCGAGCGCGCAAAACGACGTGATCAACGAGCTGGTGCAACGCCGCTTCCACGATGTTGCCGTT
GCCCAAGAGTTGAAAGTGGCAGGCTTCCCCCGTTTTGAAGGCGTTGAAGAACAAGACGATAAAGAATCTTTCAAAGTTGC
CGCCATTTTTGAAGTGTTCCCCGAAGTCGTTATCGGCGATTTGTCTGCACAAGAAGTTGAAAAAGTAACCGCTTCCGTCG
GTGATGCCGAAGTGGACCAAACTGTAGAAATCCTGCGTAAACAACGCACCCGCTTCAACCATGTCGAACGCGAAGCCCGA
AACGGCGACCGCGTCATCATTGACTTTGAAGGCAAAATCGACGGCGAACCTTTTGCCGGCGGCGCATCCAAAAACTACGC
CTTCGTATTGGGCGCAAGTCAAATGCTGCCTGAATTTGAAGCCGGCGTAGTCGGCATGAAGGCTGGCGAAAGTAAAGACG
TTACCGTCAATTTCCCTGAAGACTACCACGGTAAAGACGTTGCCGGTAAAACTGCCGTGTTCACCATTACGCTGAACAAC
GTTTCCGAAGCGACTCTGCCTGAAGTCGATGCAGATTTTGCAAAAGCTTTGGGTATTGCGGATGGCGACGTTGCCAAAAT
GCGCGAAGAAGTGCAGAAAAACGTAAGCCGCGAAGTGGAACGCCGCGTAAACGAACAAACCAAAGAATCCGTAATGAACG
CGCTGCTCAAAGCCGTAGAGCTGAAAGCACCTGTTGCTTTGGTCAATGAAGAAGCCGCACGCTTGGCAAACGAAATGAAA
CAAAATTTTGTTAACCAAGGTATGGCTGATGCTGCCAACTTGGATCTGCCTTTGGATATGTTCAAAGAACAAGCCGAACG
CCGCGTATCTTTGGGTCTGATTTTGGCCAAACTGGTTGACGAAAACAAACTGGAACCGACTGAAGAGCAAATCAAAGCCG
TTGTTGCCAACTTTGCAGAAAGCTACGAAGATCCTCAAGAAGTGATTGACTGGTACTACGCAGATCCTTCCCGCCTGCAA
GCCCCGACTTCTTTGGCGGTAGAAAGCAACGTCGTTGATTTCGTTTTGGGTAAAGCCAAAGTAAACGAAAAAGCTTTGTC
TTTTGACGAAGTGATGGGCGCGCAAGCCTGA

Upstream 100 bases:

>100_bases
CGGCAATGCGGTTCAAATATCGTACCGTTGCGCTGTTTGCTTCCCCATGTAGGGAAGAAAGTTTATCATTTTATCAACAC
AACAAATTTAAGGGCTTATG

Downstream 100 bases:

>100_bases
TTATCCTGAAAATGCCGTCTTAGGGCAGTTTTTGAAAGCACCGAAGCCGCTTTTAAAGCCCGCTTTGGTGCTTTTACATC
ATGAAAGGAGACGAAATGTC

Product: trigger factor

Products: peptidylproline (w =0) [C]

Alternate protein names: TF [H]

Number of amino acids: Translated: 436; Mature: 435

Protein sequence:

>436_residues
MSVTVETLENLERKVVLSLPWSEINAETDKKLKQTQRRAKIDGFRPGKAPLKMIAQMYGASAQNDVINELVQRRFHDVAV
AQELKVAGFPRFEGVEEQDDKESFKVAAIFEVFPEVVIGDLSAQEVEKVTASVGDAEVDQTVEILRKQRTRFNHVEREAR
NGDRVIIDFEGKIDGEPFAGGASKNYAFVLGASQMLPEFEAGVVGMKAGESKDVTVNFPEDYHGKDVAGKTAVFTITLNN
VSEATLPEVDADFAKALGIADGDVAKMREEVQKNVSREVERRVNEQTKESVMNALLKAVELKAPVALVNEEAARLANEMK
QNFVNQGMADAANLDLPLDMFKEQAERRVSLGLILAKLVDENKLEPTEEQIKAVVANFAESYEDPQEVIDWYYADPSRLQ
APTSLAVESNVVDFVLGKAKVNEKALSFDEVMGAQA

Sequences:

>Translated_436_residues
MSVTVETLENLERKVVLSLPWSEINAETDKKLKQTQRRAKIDGFRPGKAPLKMIAQMYGASAQNDVINELVQRRFHDVAV
AQELKVAGFPRFEGVEEQDDKESFKVAAIFEVFPEVVIGDLSAQEVEKVTASVGDAEVDQTVEILRKQRTRFNHVEREAR
NGDRVIIDFEGKIDGEPFAGGASKNYAFVLGASQMLPEFEAGVVGMKAGESKDVTVNFPEDYHGKDVAGKTAVFTITLNN
VSEATLPEVDADFAKALGIADGDVAKMREEVQKNVSREVERRVNEQTKESVMNALLKAVELKAPVALVNEEAARLANEMK
QNFVNQGMADAANLDLPLDMFKEQAERRVSLGLILAKLVDENKLEPTEEQIKAVVANFAESYEDPQEVIDWYYADPSRLQ
APTSLAVESNVVDFVLGKAKVNEKALSFDEVMGAQA
>Mature_435_residues
SVTVETLENLERKVVLSLPWSEINAETDKKLKQTQRRAKIDGFRPGKAPLKMIAQMYGASAQNDVINELVQRRFHDVAVA
QELKVAGFPRFEGVEEQDDKESFKVAAIFEVFPEVVIGDLSAQEVEKVTASVGDAEVDQTVEILRKQRTRFNHVEREARN
GDRVIIDFEGKIDGEPFAGGASKNYAFVLGASQMLPEFEAGVVGMKAGESKDVTVNFPEDYHGKDVAGKTAVFTITLNNV
SEATLPEVDADFAKALGIADGDVAKMREEVQKNVSREVERRVNEQTKESVMNALLKAVELKAPVALVNEEAARLANEMKQ
NFVNQGMADAANLDLPLDMFKEQAERRVSLGLILAKLVDENKLEPTEEQIKAVVANFAESYEDPQEVIDWYYADPSRLQA
PTSLAVESNVVDFVLGKAKVNEKALSFDEVMGAQA

Specific function: Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation [H]

COG id: COG0544

COG function: function code O; FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PPIase FKBP-type domain [H]

Homologues:

Organism=Escherichia coli, GI1786640, Length=436, Percent_Identity=38.302752293578, Blast_Score=310, Evalue=8e-86,

Paralogues:

None

Copy number: 1070 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 300 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 500 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 340 Molecules/Cell In: Growth-Phase, Mini

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001179
- InterPro:   IPR005215
- InterPro:   IPR008880
- InterPro:   IPR008881 [H]

Pfam domain/function: PF00254 FKBP_C; PF05698 Trigger_C; PF05697 Trigger_N [H]

EC number: NA

Molecular weight: Translated: 48168; Mature: 48037

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: PS50059 FKBP_PPIASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVTVETLENLERKVVLSLPWSEINAETDKKLKQTQRRAKIDGFRPGKAPLKMIAQMYGA
CCEEHHHHHHHHHEEEEECCHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
SAQNDVINELVQRRFHDVAVAQELKVAGFPRFEGVEEQDDKESFKVAAIFEVFPEVVIGD
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
LSAQEVEKVTASVGDAEVDQTVEILRKQRTRFNHVEREARNGDRVIIDFEGKIDGEPFAG
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC
GASKNYAFVLGASQMLPEFEAGVVGMKAGESKDVTVNFPEDYHGKDVAGKTAVFTITLNN
CCCCCEEEEEECHHHCCHHHCCEEEECCCCCCCEEEECCCCCCCCCCCCCEEEEEEEECC
VSEATLPEVDADFAKALGIADGDVAKMREEVQKNVSREVERRVNEQTKESVMNALLKAVE
CCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKAPVALVNEEAARLANEMKQNFVNQGMADAANLDLPLDMFKEQAERRVSLGLILAKLVD
HHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
ENKLEPTEEQIKAVVANFAESYEDPQEVIDWYYADPSRLQAPTSLAVESNVVDFVLGKAK
CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHCCCCHHHHHCCHHHHHHHHHH
VNEKALSFDEVMGAQA
HCHHHHHHHHHHCCCC
>Mature Secondary Structure 
SVTVETLENLERKVVLSLPWSEINAETDKKLKQTQRRAKIDGFRPGKAPLKMIAQMYGA
CEEHHHHHHHHHEEEEECCHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
SAQNDVINELVQRRFHDVAVAQELKVAGFPRFEGVEEQDDKESFKVAAIFEVFPEVVIGD
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
LSAQEVEKVTASVGDAEVDQTVEILRKQRTRFNHVEREARNGDRVIIDFEGKIDGEPFAG
CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCC
GASKNYAFVLGASQMLPEFEAGVVGMKAGESKDVTVNFPEDYHGKDVAGKTAVFTITLNN
CCCCCEEEEEECHHHCCHHHCCEEEECCCCCCCEEEECCCCCCCCCCCCCEEEEEEEECC
VSEATLPEVDADFAKALGIADGDVAKMREEVQKNVSREVERRVNEQTKESVMNALLKAVE
CCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKAPVALVNEEAARLANEMKQNFVNQGMADAANLDLPLDMFKEQAERRVSLGLILAKLVD
HHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC
ENKLEPTEEQIKAVVANFAESYEDPQEVIDWYYADPSRLQAPTSLAVESNVVDFVLGKAK
CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHCCCCHHHHHCCHHHHHHHHHH
VNEKALSFDEVMGAQA
HCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: peptidylproline (w =180) [C]

Specific reaction: peptidylproline (w =180) = peptidylproline (w =0) [C]

General reaction: Isomerases; cis-trans-Isomerases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA