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The map label for this gene is 161870154

Identifier: 161870154

GI number: 161870154

Start: 1182142

End: 1183695

Strand: Reverse

Name: 161870154

Synonym: NMCC_1193

Alternate gene names: NA

Gene position: 1183695-1182142 (Counterclockwise)

Preceding gene: 161870161

Following gene: 161870153

Centisome position: 54.97

GC content: 55.66

Gene sequence:

>1554_bases
ATGCTGTCTGAAAGGTCGGCGGATTGTTGCCCGGCGCACTTTGTGGTAAAGTTTAGAAAATCAACTCTAAACTGTGGCAG
GCGGTTTGACCGGCCGCCGATTAATGGGAACCGACAGAGGAAGCCGATGATACACACCGAACCGAGCGCGCAGCCGTCAA
CTATGGACACGGCTGCTTTTTTAAAGCACATCGAATCCGCATTCCGCCGCATTTTTTCAGACGGTATCGACCTGATGCGA
TACCTGCCCGAAGACAAATGGCTTGCCTTGAAGCAGGCGGGTTTGCTGTTGCCCTTCCTCGACAAAAAACACGGCGGGCG
CAAGGGCAGCCAGTTTGAAATTCAGGAAGTCTTGCGGATTGCGGGGCATTACGGCGTGCCCGTTACGCTGCGTACCGGCA
TCGAAGGCGCGCTGGTGTTGCAGCCACTGCAAGAGTTCGGCGATGAAGCGCAAATCGCACAGGGTTTGGACATGGTTTTC
AAAGGCGAGGGCGGTGGTTTGGGCGTTACCGAACCCGAAACCTCCGGCGCGGCGATTGCCCGAGAAATGCAGTCTTACTA
CGAATATACCGACGGACAAACCATTTACGTCAACGCCGCAAAATACTGGCAGGGCAACTCGCAAAGCGACTTCCTCCTCG
TTGCCGCCAAAGAACGCAAAAACGGCAAACTCGCCAAAGTCATCGACCTGCTGCTCGTCCCCAAAACATACATCCGCTGC
GAAACCCTCGCATCCGAAGGCTTGCGCGCCGTCCGTTACGCCGTCAACCGCATCGATGCCGAAATGCCTGCAACCGCCGT
GATGAAACTCTCCCAGAGCGACGCTGCCGGTTTGCGCGCGTTCCAAAACATCTTTATCCGCAGCCGCCTGCAACTGATCG
GCATGACGCACGGCATTATGGAATACATCCTTGAAAACCTGGAACGATACGTCCGCAACGACATCAGATTCGTCGATTAC
GAACGCCGCGAAATCCGGCGCCGCCATCAGGTTTCCGAGATTCTTTACCGCTACGTCTGCCATTCCGTTTCGCCCGTTGC
ACCCGTCGCCCATCAGCTGATGGAGGCGAACATCGTCAAAACCCTCGCCACGGAATACACTTACGCCGCCGCGCAAATGT
TGCAAAAACTTTTGGGCGCGAAGGGTTTTGAACGCGGACACACCGCCGGCAATATCGCTATCGACATCCGCCCCTTCACG
ATTTTTGAAGGCCCGAACGATATGCTTTATGCCGAAATTTACGACCAGTTCGTCCGCGCCACCGCCGAAGAAAAAGAAGC
AGGCATGAAGTTGGACAAAAACCAAACCCTGCTCGACCGCCTGCAAACCGATGCCCGCTTTGCCGCCGTCGCCCGCGACT
ACACTTTGCCCGAAGACATCCGCAGCTTCCTGCAGGAACACACCCTGACCGACGCCTGCGCCCTGCAAAAAGTCTTCATC
GGCAAAATCATCGCCCGACTCTTTGTCTTCGTACAGGCGGAACACGAAGACACCGCAGCCTTCCTGCTGAACGACATCCG
CAAAGATATATTGGACTGCCGATATTGCGGATAG

Upstream 100 bases:

>100_bases
CCAACGGGATTTTTCACGGGGTTTGGGGATGGGGTAGGTCATAGTGCGGCAATCGGCGGACAGTGATGCAAACGGTCATT
TTAGCACGGGAGGGGGCGCG

Downstream 100 bases:

>100_bases
CGGGCAAATACGGCGGCATACGGATTTCGGGCGGTGCAAGAGGCAACGTGCGGCATTCCGCAAAGCCGCCGATTGCGGCG
GATGCCGCATTTCGCGCCGC

Product: very long chain acyl-CoA dehydrogenase-related protein

Products: NA

Alternate protein names: Acyl-CoA Dehydrogenase Domain Protein; AcyL-CoA Dehydrogenase DomaiN-Containing Protein; Acyl-CoA Dehydrogenase DomaiN-Containing Protein

Number of amino acids: Translated: 517; Mature: 517

Protein sequence:

>517_residues
MLSERSADCCPAHFVVKFRKSTLNCGRRFDRPPINGNRQRKPMIHTEPSAQPSTMDTAAFLKHIESAFRRIFSDGIDLMR
YLPEDKWLALKQAGLLLPFLDKKHGGRKGSQFEIQEVLRIAGHYGVPVTLRTGIEGALVLQPLQEFGDEAQIAQGLDMVF
KGEGGGLGVTEPETSGAAIAREMQSYYEYTDGQTIYVNAAKYWQGNSQSDFLLVAAKERKNGKLAKVIDLLLVPKTYIRC
ETLASEGLRAVRYAVNRIDAEMPATAVMKLSQSDAAGLRAFQNIFIRSRLQLIGMTHGIMEYILENLERYVRNDIRFVDY
ERREIRRRHQVSEILYRYVCHSVSPVAPVAHQLMEANIVKTLATEYTYAAAQMLQKLLGAKGFERGHTAGNIAIDIRPFT
IFEGPNDMLYAEIYDQFVRATAEEKEAGMKLDKNQTLLDRLQTDARFAAVARDYTLPEDIRSFLQEHTLTDACALQKVFI
GKIIARLFVFVQAEHEDTAAFLLNDIRKDILDCRYCG

Sequences:

>Translated_517_residues
MLSERSADCCPAHFVVKFRKSTLNCGRRFDRPPINGNRQRKPMIHTEPSAQPSTMDTAAFLKHIESAFRRIFSDGIDLMR
YLPEDKWLALKQAGLLLPFLDKKHGGRKGSQFEIQEVLRIAGHYGVPVTLRTGIEGALVLQPLQEFGDEAQIAQGLDMVF
KGEGGGLGVTEPETSGAAIAREMQSYYEYTDGQTIYVNAAKYWQGNSQSDFLLVAAKERKNGKLAKVIDLLLVPKTYIRC
ETLASEGLRAVRYAVNRIDAEMPATAVMKLSQSDAAGLRAFQNIFIRSRLQLIGMTHGIMEYILENLERYVRNDIRFVDY
ERREIRRRHQVSEILYRYVCHSVSPVAPVAHQLMEANIVKTLATEYTYAAAQMLQKLLGAKGFERGHTAGNIAIDIRPFT
IFEGPNDMLYAEIYDQFVRATAEEKEAGMKLDKNQTLLDRLQTDARFAAVARDYTLPEDIRSFLQEHTLTDACALQKVFI
GKIIARLFVFVQAEHEDTAAFLLNDIRKDILDCRYCG
>Mature_517_residues
MLSERSADCCPAHFVVKFRKSTLNCGRRFDRPPINGNRQRKPMIHTEPSAQPSTMDTAAFLKHIESAFRRIFSDGIDLMR
YLPEDKWLALKQAGLLLPFLDKKHGGRKGSQFEIQEVLRIAGHYGVPVTLRTGIEGALVLQPLQEFGDEAQIAQGLDMVF
KGEGGGLGVTEPETSGAAIAREMQSYYEYTDGQTIYVNAAKYWQGNSQSDFLLVAAKERKNGKLAKVIDLLLVPKTYIRC
ETLASEGLRAVRYAVNRIDAEMPATAVMKLSQSDAAGLRAFQNIFIRSRLQLIGMTHGIMEYILENLERYVRNDIRFVDY
ERREIRRRHQVSEILYRYVCHSVSPVAPVAHQLMEANIVKTLATEYTYAAAQMLQKLLGAKGFERGHTAGNIAIDIRPFT
IFEGPNDMLYAEIYDQFVRATAEEKEAGMKLDKNQTLLDRLQTDARFAAVARDYTLPEDIRSFLQEHTLTDACALQKVFI
GKIIARLFVFVQAEHEDTAAFLLNDIRKDILDCRYCG

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58479; Mature: 58479

Theoretical pI: Translated: 8.01; Mature: 8.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSERSADCCPAHFVVKFRKSTLNCGRRFDRPPINGNRQRKPMIHTEPSAQPSTMDTAAF
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHH
LKHIESAFRRIFSDGIDLMRYLPEDKWLALKQAGLLLPFLDKKHGGRKGSQFEIQEVLRI
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH
AGHYGVPVTLRTGIEGALVLQPLQEFGDEAQIAQGLDMVFKGEGGGLGVTEPETSGAAIA
HCCCCCCEEEECCCCHHHHHHHHHHHCCHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHH
REMQSYYEYTDGQTIYVNAAKYWQGNSQSDFLLVAAKERKNGKLAKVIDLLLVPKTYIRC
HHHHHHHHHCCCCEEEEEEHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCHHHHHH
ETLASEGLRAVRYAVNRIDAEMPATAVMKLSQSDAAGLRAFQNIFIRSRLQLIGMTHGIM
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EYILENLERYVRNDIRFVDYERREIRRRHQVSEILYRYVCHSVSPVAPVAHQLMEANIVK
HHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
TLATEYTYAAAQMLQKLLGAKGFERGHTAGNIAIDIRPFTIFEGPNDMLYAEIYDQFVRA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHH
TAEEKEAGMKLDKNQTLLDRLQTDARFAAVARDYTLPEDIRSFLQEHTLTDACALQKVFI
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHH
GKIIARLFVFVQAEHEDTAAFLLNDIRKDILDCRYCG
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLSERSADCCPAHFVVKFRKSTLNCGRRFDRPPINGNRQRKPMIHTEPSAQPSTMDTAAF
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHH
LKHIESAFRRIFSDGIDLMRYLPEDKWLALKQAGLLLPFLDKKHGGRKGSQFEIQEVLRI
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH
AGHYGVPVTLRTGIEGALVLQPLQEFGDEAQIAQGLDMVFKGEGGGLGVTEPETSGAAIA
HCCCCCCEEEECCCCHHHHHHHHHHHCCHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHH
REMQSYYEYTDGQTIYVNAAKYWQGNSQSDFLLVAAKERKNGKLAKVIDLLLVPKTYIRC
HHHHHHHHHCCCCEEEEEEHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCHHHHHH
ETLASEGLRAVRYAVNRIDAEMPATAVMKLSQSDAAGLRAFQNIFIRSRLQLIGMTHGIM
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EYILENLERYVRNDIRFVDYERREIRRRHQVSEILYRYVCHSVSPVAPVAHQLMEANIVK
HHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
TLATEYTYAAAQMLQKLLGAKGFERGHTAGNIAIDIRPFTIFEGPNDMLYAEIYDQFVRA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHHH
TAEEKEAGMKLDKNQTLLDRLQTDARFAAVARDYTLPEDIRSFLQEHTLTDACALQKVFI
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHH
GKIIARLFVFVQAEHEDTAAFLLNDIRKDILDCRYCG
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA