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The map label for this gene is ruvB [H]

Identifier: 161870086

GI number: 161870086

Start: 1111507

End: 1112538

Strand: Direct

Name: ruvB [H]

Synonym: NMCC_1124

Alternate gene names: 161870086

Gene position: 1111507-1112538 (Clockwise)

Preceding gene: 161870085

Following gene: 161870088

Centisome position: 51.62

GC content: 59.59

Gene sequence:

>1032_bases
ATGCTGCAAACCGACAACCTGACCGCCGCGCAACCGCAACGCATCGTTGCCGCCCAAACCGCCTCCGCACAGGAAGAACT
GCTCGAACGCGCCCTCCGCCCCAAAACGCTGGACGACTACATCGGGCAAGACAAAGCCAAAGAACAGCTTGCCATTTTCA
TCCAAGCCGCCAAAAAACGCGGCGAAGCACTCGACCACGTTTTGCTCTTCGGCCCGCCCGGACTGGGCAAAACCACACTG
GCGCACATCATCGCCAAAGAATTGGGCGTAAATTTGCGCCAAACCAGCGGCCCCGTCCTCGAACGCGCAGGCGACCTCGC
CGCCCTTTTGACCAACCTTGATCCGCACGATGTATTGTTCATCGACGAAATCCACCGCCTCAGCCCTGTTGTCGAAGAAA
TCCTCTATCCCGCGCTCGAAGACTACCGGCTCGACATTATGATAGGCGAAGGACCCGCCGCCCGTTCCGTCAAAATCGAC
CTGCCGCCCTTCACGCTCATCGGCGCGACCACCCGCGCCGGTATGCTGACCAATCCGTTGCGCGACCGCTTCGGCATCGT
CTCCCGCCTTGAGTTTTACGAAAACCGAGACCTTACCACCATCGTCAGCCGTTCGGCACAACTGTTGCAGCTCGATATGT
CCGAAGAAGGCGCGGAAGAAATCGCCAAACGCAGCCGCGGTACGCCGCGCATCGCCAACCGCCTGTTGCGACGCGTGCGC
GATTTCGCCGACGTGAAAAACAACGGCACAATCGACGGCGGCATCGCCGATGCCGCTTTAAGTATGCTGGACGTGGACGC
GCAGGGGCTGGACGTGATGGACAGGAAATTTCTCGAAGCCGTTTTGCACAAATTCGGCGGCGGCCCGGTCGGTTTGGACA
ATGTTGCCGCCGCCATCGGCGAATCTACAGACACCATCGAAGACGTTATCGAACCCTACCTTATCCAACAAGGCTTCCTG
CAACGCACCCCGCGCGGCAGGATGGCGACCGAACGCGCCTACCTGCATTTCGGGCTGCCCGTCGAAAAATAA

Upstream 100 bases:

>100_bases
GCGCGAAACGCGCGGATAAAACGCTTTTGACCGTTATCTTTTCAATGCCGTCTGAAACGCCGCCGACCGTTCGGACGGCA
TACCCGACAAAGGGAACACT

Downstream 100 bases:

>100_bases
CGCAATGCCGTCTGAAACAGAGCTAATTTTCAGACGGCATTTCTATTTCAATCATTGGCGCAAGGTTCAGCCTGCCGCTT
TTTTCCAGTTCCGCCCTCAT

Product: Holliday junction DNA helicase RuvB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MLQTDNLTAAQPQRIVAAQTASAQEELLERALRPKTLDDYIGQDKAKEQLAIFIQAAKKRGEALDHVLLFGPPGLGKTTL
AHIIAKELGVNLRQTSGPVLERAGDLAALLTNLDPHDVLFIDEIHRLSPVVEEILYPALEDYRLDIMIGEGPAARSVKID
LPPFTLIGATTRAGMLTNPLRDRFGIVSRLEFYENRDLTTIVSRSAQLLQLDMSEEGAEEIAKRSRGTPRIANRLLRRVR
DFADVKNNGTIDGGIADAALSMLDVDAQGLDVMDRKFLEAVLHKFGGGPVGLDNVAAAIGESTDTIEDVIEPYLIQQGFL
QRTPRGRMATERAYLHFGLPVEK

Sequences:

>Translated_343_residues
MLQTDNLTAAQPQRIVAAQTASAQEELLERALRPKTLDDYIGQDKAKEQLAIFIQAAKKRGEALDHVLLFGPPGLGKTTL
AHIIAKELGVNLRQTSGPVLERAGDLAALLTNLDPHDVLFIDEIHRLSPVVEEILYPALEDYRLDIMIGEGPAARSVKID
LPPFTLIGATTRAGMLTNPLRDRFGIVSRLEFYENRDLTTIVSRSAQLLQLDMSEEGAEEIAKRSRGTPRIANRLLRRVR
DFADVKNNGTIDGGIADAALSMLDVDAQGLDVMDRKFLEAVLHKFGGGPVGLDNVAAAIGESTDTIEDVIEPYLIQQGFL
QRTPRGRMATERAYLHFGLPVEK
>Mature_343_residues
MLQTDNLTAAQPQRIVAAQTASAQEELLERALRPKTLDDYIGQDKAKEQLAIFIQAAKKRGEALDHVLLFGPPGLGKTTL
AHIIAKELGVNLRQTSGPVLERAGDLAALLTNLDPHDVLFIDEIHRLSPVVEEILYPALEDYRLDIMIGEGPAARSVKID
LPPFTLIGATTRAGMLTNPLRDRFGIVSRLEFYENRDLTTIVSRSAQLLQLDMSEEGAEEIAKRSRGTPRIANRLLRRVR
DFADVKNNGTIDGGIADAALSMLDVDAQGLDVMDRKFLEAVLHKFGGGPVGLDNVAAAIGESTDTIEDVIEPYLIQQGFL
QRTPRGRMATERAYLHFGLPVEK

Specific function: The ruvA-ruvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is an helicase that mediates the Holliday

COG id: COG2255

COG function: function code L; Holliday junction resolvasome, helicase subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ruvB family [H]

Homologues:

Organism=Escherichia coli, GI1788167, Length=326, Percent_Identity=73.3128834355828, Blast_Score=491, Evalue=1e-140,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR004605
- InterPro:   IPR008823
- InterPro:   IPR008824
- InterPro:   IPR011991
- ProDom:   PD005323 [H]

Pfam domain/function: PF05491 RuvB_C; PF05496 RuvB_N [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 37661; Mature: 37661

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQTDNLTAAQPQRIVAAQTASAQEELLERALRPKTLDDYIGQDKAKEQLAIFIQAAKKR
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHH
GEALDHVLLFGPPGLGKTTLAHIIAKELGVNLRQTSGPVLERAGDLAALLTNLDPHDVLF
HHHHCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEH
IDEIHRLSPVVEEILYPALEDYRLDIMIGEGPAARSVKIDLPPFTLIGATTRAGMLTNPL
HHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCEEEEECCCEEEECCCHHCCHHHHHH
RDRFGIVSRLEFYENRDLTTIVSRSAQLLQLDMSEEGAEEIAKRSRGTPRIANRLLRRVR
HHHHHHHHHHHHHCCCCHHHHHHCCHHHEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHH
DFADVKNNGTIDGGIADAALSMLDVDAQGLDVMDRKFLEAVLHKFGGGPVGLDNVAAAIG
HHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHC
ESTDTIEDVIEPYLIQQGFLQRTPRGRMATERAYLHFGLPVEK
CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEEEECCCCCC
>Mature Secondary Structure
MLQTDNLTAAQPQRIVAAQTASAQEELLERALRPKTLDDYIGQDKAKEQLAIFIQAAKKR
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHHHH
GEALDHVLLFGPPGLGKTTLAHIIAKELGVNLRQTSGPVLERAGDLAALLTNLDPHDVLF
HHHHCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEH
IDEIHRLSPVVEEILYPALEDYRLDIMIGEGPAARSVKIDLPPFTLIGATTRAGMLTNPL
HHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCEEEEECCCEEEECCCHHCCHHHHHH
RDRFGIVSRLEFYENRDLTTIVSRSAQLLQLDMSEEGAEEIAKRSRGTPRIANRLLRRVR
HHHHHHHHHHHHHCCCCHHHHHHCCHHHEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHH
DFADVKNNGTIDGGIADAALSMLDVDAQGLDVMDRKFLEAVLHKFGGGPVGLDNVAAAIG
HHHHHCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHC
ESTDTIEDVIEPYLIQQGFLQRTPRGRMATERAYLHFGLPVEK
CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA