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The map label for this gene is fdx [H]

Identifier: 161870021

GI number: 161870021

Start: 1037182

End: 1037523

Strand: Direct

Name: fdx [H]

Synonym: NMCC_1054

Alternate gene names: 161870021

Gene position: 1037182-1037523 (Clockwise)

Preceding gene: 161870020

Following gene: 161870022

Centisome position: 48.16

GC content: 54.39

Gene sequence:

>342_bases
ATGCCCAAAATCACCGTACTTCCACACACGACATTATGCCCCGAAGGCGCGGTTATCGAAGACGCGCCCGAAGGCAAAAC
CGTCCTTGACGTGCTGCTCGACCATGATATCGAAGTCGATCACGCCTGCGAAAAATCCTGCGCCTGCACCACCTGCCACG
TCATCATCCGCAAAGGTTTCGACAGTTTGGAAGAACCGACCGAATTGGAAGAAGACCTGCTCGATCAGGCTTGGGGTTTG
GAAGCCGATTCACGCCTGAGTTGTCAGGCGGTTGTCGCCGGCGAAGATTTGATTGTGGAAATCCCCAAATACACCATCAA
CCACGCGCGCGAAGAACACTGA

Upstream 100 bases:

>100_bases
TGGCGGGCTGGCAAAATGTTGCCGACCTGCTCGAACCGCGACATTAGGCGGACAGTTTTCCGAAAACGAACACAAACACT
TTTACAGAAAGACAATAAAA

Downstream 100 bases:

>100_bases
AAACAGGCCGTCTGAAGCCGGCACGCTTCAGACGGCATTGTTGCGCGGATAAGGCGCAATCGCCCGAAAACAGGCGTTCG
TACAGGCGGAACTTTCGATT

Product: ferredoxin, 2Fe-2S type

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MPKITVLPHTTLCPEGAVIEDAPEGKTVLDVLLDHDIEVDHACEKSCACTTCHVIIRKGFDSLEEPTELEEDLLDQAWGL
EADSRLSCQAVVAGEDLIVEIPKYTINHAREEH

Sequences:

>Translated_113_residues
MPKITVLPHTTLCPEGAVIEDAPEGKTVLDVLLDHDIEVDHACEKSCACTTCHVIIRKGFDSLEEPTELEEDLLDQAWGL
EADSRLSCQAVVAGEDLIVEIPKYTINHAREEH
>Mature_112_residues
PKITVLPHTTLCPEGAVIEDAPEGKTVLDVLLDHDIEVDHACEKSCACTTCHVIIRKGFDSLEEPTELEEDLLDQAWGLE
ADSRLSCQAVVAGEDLIVEIPKYTINHAREEH

Specific function: Ferredoxin are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. Although the function of this ferredoxin is unknown it is probable that it has a role as a cellular electron transfer protein. Involved in the in vivo as

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Escherichia coli, GI1788874, Length=111, Percent_Identity=68.4684684684685, Blast_Score=159, Evalue=3e-41,
Organism=Caenorhabditis elegans, GI17544202, Length=92, Percent_Identity=41.304347826087, Blast_Score=67, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6325004, Length=87, Percent_Identity=42.5287356321839, Blast_Score=73, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24661503, Length=92, Percent_Identity=42.3913043478261, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001055
- InterPro:   IPR018298
- InterPro:   IPR012675
- InterPro:   IPR011536
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 12475; Mature: 12344

Theoretical pI: Translated: 4.14; Mature: 4.14

Prosite motif: PS51085 2FE2S_FER_2 ; PS00814 ADX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
5.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKITVLPHTTLCPEGAVIEDAPEGKTVLDVLLDHDIEVDHACEKSCACTTCHVIIRKGF
CCCEECCCCCCCCCCCCEECCCCCCHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHCC
DSLEEPTELEEDLLDQAWGLEADSRLSCQAVVAGEDLIVEIPKYTINHAREEH
CCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEECCCHHHCCCCCCC
>Mature Secondary Structure 
PKITVLPHTTLCPEGAVIEDAPEGKTVLDVLLDHDIEVDHACEKSCACTTCHVIIRKGF
CCEECCCCCCCCCCCCEECCCCCCHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHCC
DSLEEPTELEEDLLDQAWGLEADSRLSCQAVVAGEDLIVEIPKYTINHAREEH
CCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEECCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: 2Fe-2S Cluster. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]