Click here to switch to the map view.

The map label for this gene is 161870008

Identifier: 161870008

GI number: 161870008

Start: 1026822

End: 1027061

Strand: Direct

Name: 161870008

Synonym: NMCC_1041

Alternate gene names: NA

Gene position: 1026822-1027061 (Clockwise)

Preceding gene: 161870007

Following gene: 161870009

Centisome position: 47.68

GC content: 44.58

Gene sequence:

>240_bases
ATGATTCTCAACATACGCAAAATGGGAAACTCGCAAGGCGTGATTCTGCCCAAATCATTATTGGGTCAAATAGGGGCAGT
AGACAGCTTGGCTGTTACAGTTGAAAAGGGCAATATTATTTTAAGCTGTCCTACCGTTCGCAGGGGATGGGCAGAAGCTG
CCGCAATGCTTGTCGAAACCGAGCAGGAGCATTTTTTTTCCGAAATTGAAAACGAAGCGGATAAAGAATGGATATGGTAG

Upstream 100 bases:

>100_bases
TGAAATCGGACAAACTGTCAGGCAATCTTTTTCAATATTGACACTACCTCATCAAGGTAATAACATTGTTATTACATAAA
CTGGTAAATAGGGTACGTAT

Downstream 100 bases:

>100_bases
TACGCGGCGGAATCTATCTGGTCTCCTTAGACCCGACCGTAGGAAGCGAAATCAAAAAGACACGTCCTTGTGTCGTAGTC
TCTCCTCCTGAAATACACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 79

Protein sequence:

>79_residues
MILNIRKMGNSQGVILPKSLLGQIGAVDSLAVTVEKGNIILSCPTVRRGWAEAAAMLVETEQEHFFSEIENEADKEWIW

Sequences:

>Translated_79_residues
MILNIRKMGNSQGVILPKSLLGQIGAVDSLAVTVEKGNIILSCPTVRRGWAEAAAMLVETEQEHFFSEIENEADKEWIW
>Mature_79_residues
MILNIRKMGNSQGVILPKSLLGQIGAVDSLAVTVEKGNIILSCPTVRRGWAEAAAMLVETEQEHFFSEIENEADKEWIW

Specific function: Unknown

COG id: COG2336

COG function: function code T; Growth regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8784; Mature: 8784

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILNIRKMGNSQGVILPKSLLGQIGAVDSLAVTVEKGNIILSCPTVRRGWAEAAAMLVET
CEEEEECCCCCCCEEECHHHHHHCCCCCEEEEEEECCCEEEECCCCCCCHHHHHHHHHHC
EQEHFFSEIENEADKEWIW
HHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MILNIRKMGNSQGVILPKSLLGQIGAVDSLAVTVEKGNIILSCPTVRRGWAEAAAMLVET
CEEEEECCCCCCCEEECHHHHHHCCCCCEEEEEEECCCEEEECCCCCCCHHHHHHHHHHC
EQEHFFSEIENEADKEWIW
HHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA