Definition | Neisseria meningitidis 053442, complete genome. |
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Accession | NC_010120 |
Length | 2,153,416 |
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The map label for this gene is insI1 [C]
Identifier: 161869972
GI number: 161869972
Start: 1005279
End: 1006244
Strand: Reverse
Name: insI1 [C]
Synonym: NMCC_1005
Alternate gene names: 161869972
Gene position: 1006244-1005279 (Counterclockwise)
Preceding gene: 161869973
Following gene: 161869964
Centisome position: 46.73
GC content: 51.45
Gene sequence:
>966_bases ATGAGCTACACGCAACTGACCCAGGGCGAACGATACCACATCCAATACCTGTCCCGCCACTGCACCGTCACCGAAATCGC CAAACAGCTGAACCGCCACAAAAGCACCATCAGCCGCGAAATCAGACGGCACCGCACCCAAGGGCAGCAATACAGCGCCG AAAAAGCCCAGCGGCAAAGCCAGACTATCAAACAGCGTAAGCGACAACCCTATAAGCTCGATTCGCAGCTGATTCAGCAC ATCGACACCCTTATCCGCCGCAAACTCAGTCCCGAACAAGTATGCGCCTACCTGTGCAAACACCACCAGATCACGCTCCA CCACAGCACCATTTACCGCTACCTTCGCCAAGACAAAAGCAACGGCAGCACGTTGTGGCAACATCTCAGAATATGCAGCA AACCCTACCGCAAACGCTACGGCAGCACATGGACCAGAGGCAAAGTCCCCAACCGTGTCGGCATAGAAAACCGACCCGCT ATCGTCGACCAGAAATCCCATATCGGCGATTGGGAAGCCGACACCATTGTCGGCAAAGGACAGAAAAGCGCATTATTGAC CTTGGTCGAACGCGTTACCCGCTACACCATCATCTGCAAATTGGATAGCCTCAAAGCCGAAGACACTGCCCGGGCAGCTG TTAGGGCATTAAAGGCACATAAAGACAGGGTGCACACCATCACCATGGATAACGGCAAAGAGTTCTACCAACACACCAAA ATAACCAAAGCATTGAAAGCGGAGACTTATTTTTGTCGCCCTTACCATTCTTGGGAGAAAGGGCTGAATGAGAACACCAA CGGACTCATCCGGCAATACTTCCCCAAACAAACCGATTTCCGTAACATCAGTGATCGGGAGATACGCAGGGTTCAAGATG AGTTGAACCACCGGCCAAGAAAAACACTTGGCTACGAAACGCCAAGTGTTTTATTCTTGAATCTGTTCCAACCACTAATA CACTAG
Upstream 100 bases:
>100_bases GTTTCAGACGACGGCGGATTCGCATTTGAAGTGCAACTTTCCCTAACAGAAAAAGGCCAGTATGCGGTAGCATACGACCT TTCCTGCAAGAAAGATTGCC
Downstream 100 bases:
>100_bases TGTTGCACTTGAAATCCGAATCCAAGGACCTTTAAATCATGGGTTAAAGCCTATTTGAACCGGCTAGGCAAGCTCCTGCT CCGTAGGCTCAATCACGTTT
Product: transposase for IS1655
Products: NA
Alternate protein names: Transposon TN4551 [H]
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MSYTQLTQGERYHIQYLSRHCTVTEIAKQLNRHKSTISREIRRHRTQGQQYSAEKAQRQSQTIKQRKRQPYKLDSQLIQH IDTLIRRKLSPEQVCAYLCKHHQITLHHSTIYRYLRQDKSNGSTLWQHLRICSKPYRKRYGSTWTRGKVPNRVGIENRPA IVDQKSHIGDWEADTIVGKGQKSALLTLVERVTRYTIICKLDSLKAEDTARAAVRALKAHKDRVHTITMDNGKEFYQHTK ITKALKAETYFCRPYHSWEKGLNENTNGLIRQYFPKQTDFRNISDREIRRVQDELNHRPRKTLGYETPSVLFLNLFQPLI H
Sequences:
>Translated_321_residues MSYTQLTQGERYHIQYLSRHCTVTEIAKQLNRHKSTISREIRRHRTQGQQYSAEKAQRQSQTIKQRKRQPYKLDSQLIQH IDTLIRRKLSPEQVCAYLCKHHQITLHHSTIYRYLRQDKSNGSTLWQHLRICSKPYRKRYGSTWTRGKVPNRVGIENRPA IVDQKSHIGDWEADTIVGKGQKSALLTLVERVTRYTIICKLDSLKAEDTARAAVRALKAHKDRVHTITMDNGKEFYQHTK ITKALKAETYFCRPYHSWEKGLNENTNGLIRQYFPKQTDFRNISDREIRRVQDELNHRPRKTLGYETPSVLFLNLFQPLI H >Mature_320_residues SYTQLTQGERYHIQYLSRHCTVTEIAKQLNRHKSTISREIRRHRTQGQQYSAEKAQRQSQTIKQRKRQPYKLDSQLIQHI DTLIRRKLSPEQVCAYLCKHHQITLHHSTIYRYLRQDKSNGSTLWQHLRICSKPYRKRYGSTWTRGKVPNRVGIENRPAI VDQKSHIGDWEADTIVGKGQKSALLTLVERVTRYTIICKLDSLKAEDTARAAVRALKAHKDRVHTITMDNGKEFYQHTKI TKALKAETYFCRPYHSWEKGLNENTNGLIRQYFPKQTDFRNISDREIRRVQDELNHRPRKTLGYETPSVLFLNLFQPLIH
Specific function: Required for the transposition of the insertion element (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 integrase catalytic domain [H]
Homologues:
Organism=Escherichia coli, GI1786450, Length=320, Percent_Identity=35.625, Blast_Score=147, Evalue=9e-37, Organism=Escherichia coli, GI1790736, Length=320, Percent_Identity=35.625, Blast_Score=147, Evalue=1e-36, Organism=Escherichia coli, GI1787671, Length=320, Percent_Identity=35.625, Blast_Score=147, Evalue=1e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009057 - InterPro: IPR012287 - InterPro: IPR001584 - InterPro: IPR012337 - InterPro: IPR001598 [H]
Pfam domain/function: PF00665 rve [H]
EC number: NA
Molecular weight: Translated: 37988; Mature: 37857
Theoretical pI: Translated: 10.62; Mature: 10.62
Prosite motif: PS50994 INTEGRASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYTQLTQGERYHIQYLSRHCTVTEIAKQLNRHKSTISREIRRHRTQGQQYSAEKAQRQS CCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH QTIKQRKRQPYKLDSQLIQHIDTLIRRKLSPEQVCAYLCKHHQITLHHSTIYRYLRQDKS HHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHCCC NGSTLWQHLRICSKPYRKRYGSTWTRGKVPNRVGIENRPAIVDQKSHIGDWEADTIVGKG CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCC QKSALLTLVERVTRYTIICKLDSLKAEDTARAAVRALKAHKDRVHTITMDNGKEFYQHTK CHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHH ITKALKAETYFCRPYHSWEKGLNENTNGLIRQYFPKQTDFRNISDREIRRVQDELNHRPR HHHHHHHCCCEECCCHHHHHCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCC KTLGYETPSVLFLNLFQPLIH HHCCCCCHHHHHHHHHHHHHC >Mature Secondary Structure SYTQLTQGERYHIQYLSRHCTVTEIAKQLNRHKSTISREIRRHRTQGQQYSAEKAQRQS CCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH QTIKQRKRQPYKLDSQLIQHIDTLIRRKLSPEQVCAYLCKHHQITLHHSTIYRYLRQDKS HHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHCCC NGSTLWQHLRICSKPYRKRYGSTWTRGKVPNRVGIENRPAIVDQKSHIGDWEADTIVGKG CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCC QKSALLTLVERVTRYTIICKLDSLKAEDTARAAVRALKAHKDRVHTITMDNGKEFYQHTK CHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHH ITKALKAETYFCRPYHSWEKGLNENTNGLIRQYFPKQTDFRNISDREIRRVQDELNHRPR HHHHHHHCCCEECCCHHHHHCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCC KTLGYETPSVLFLNLFQPLIH HHCCCCCHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2820936 [H]