Click here to switch to the map view.

The map label for this gene is 161869951

Identifier: 161869951

GI number: 161869951

Start: 982485

End: 983165

Strand: Reverse

Name: 161869951

Synonym: NMCC_0984

Alternate gene names: NA

Gene position: 983165-982485 (Counterclockwise)

Preceding gene: 161869953

Following gene: 161869950

Centisome position: 45.66

GC content: 56.39

Gene sequence:

>681_bases
ATGATTTTCCAAACAGTCTGGTTTTCAGATATGGTACTGTCGGTTTCGTGGATTGTCCTTATCCTGATACTGGCAGCTTC
CGCGCCGTCCGCATTCCGCTCGCTTGACCGCTACCGTTCCGCCCTTCCACTGTGTACCGTAATTTTTTCCGCAGCATGGT
GTCTGAACGCCTCTGCCGGCGGCGGACAGCTTGCACAGATGAACTACCACCTGCTCGCCGTCAATCTGGTTGCACTGATG
GTGGGCACTTCCGCCGCCCTTTGGCTTGCCGCGCTGCTGATGCTGCCCTACTGCCTGCTGTTTGCCGGTTCTGTCGGCGC
ATATCCGCCGAACGCTTTGGTGCTGATTCTGCCCGCGCTGGTCGTCAACCGCCTGTCGCGTATGCTGGTCAACCGCCTGC
CGCCCAATATTTTCATCTTTATTTTCGTCAACGGCTTTCTCGCTTCCGCCGCCGGCATTCTGCTGACCGGGCTGGTGCTG
ACCGGTATTTTGGATGCCGCAAACGCTTTTCCGTCCGAAATATTGTGGACGACCGCCCTGCCCGTCTTTATTCTGCTGGC
GTGGGCGGAAGCCTTCCTCAGCGGCATTTCAACTGCCATATTTGTTGCACTGAAGCCCCATTGGATCAACACTTTCGACG
ACAACCGCTATCTGAAGTCCGACCGTAGCATATGGAGGTAG

Upstream 100 bases:

>100_bases
AACAACCGGTCGGCAATTCTGCCGAAACCGATTCGGCTTTCGGTTTGCCCCCGCCGACAGTATAATAGCCGTCCCTTCCC
TTAATCTTTGCGGCATTGCC

Downstream 100 bases:

>100_bases
CCTTCAGACGGCATAGGCAGACAAAACCATGCTTTCCAACATCATCCCCCTTTCCATCGGTGCGGCACTCGGTGCAACGG
CGCGTTGGCTGCTCAACCTC

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MIFQTVWFSDMVLSVSWIVLILILAASAPSAFRSLDRYRSALPLCTVIFSAAWCLNASAGGGQLAQMNYHLLAVNLVALM
VGTSAALWLAALLMLPYCLLFAGSVGAYPPNALVLILPALVVNRLSRMLVNRLPPNIFIFIFVNGFLASAAGILLTGLVL
TGILDAANAFPSEILWTTALPVFILLAWAEAFLSGISTAIFVALKPHWINTFDDNRYLKSDRSIWR

Sequences:

>Translated_226_residues
MIFQTVWFSDMVLSVSWIVLILILAASAPSAFRSLDRYRSALPLCTVIFSAAWCLNASAGGGQLAQMNYHLLAVNLVALM
VGTSAALWLAALLMLPYCLLFAGSVGAYPPNALVLILPALVVNRLSRMLVNRLPPNIFIFIFVNGFLASAAGILLTGLVL
TGILDAANAFPSEILWTTALPVFILLAWAEAFLSGISTAIFVALKPHWINTFDDNRYLKSDRSIWR
>Mature_226_residues
MIFQTVWFSDMVLSVSWIVLILILAASAPSAFRSLDRYRSALPLCTVIFSAAWCLNASAGGGQLAQMNYHLLAVNLVALM
VGTSAALWLAALLMLPYCLLFAGSVGAYPPNALVLILPALVVNRLSRMLVNRLPPNIFIFIFVNGFLASAAGILLTGLVL
TGILDAANAFPSEILWTTALPVFILLAWAEAFLSGISTAIFVALKPHWINTFDDNRYLKSDRSIWR

Specific function: Unknown

COG id: COG3235

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24589; Mature: 24589

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFQTVWFSDMVLSVSWIVLILILAASAPSAFRSLDRYRSALPLCTVIFSAAWCLNASAG
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GGQLAQMNYHLLAVNLVALMVGTSAALWLAALLMLPYCLLFAGSVGAYPPNALVLILPAL
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
VVNRLSRMLVNRLPPNIFIFIFVNGFLASAAGILLTGLVLTGILDAANAFPSEILWTTAL
HHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
PVFILLAWAEAFLSGISTAIFVALKPHWINTFDDNRYLKSDRSIWR
HHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHCCCCCCC
>Mature Secondary Structure
MIFQTVWFSDMVLSVSWIVLILILAASAPSAFRSLDRYRSALPLCTVIFSAAWCLNASAG
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GGQLAQMNYHLLAVNLVALMVGTSAALWLAALLMLPYCLLFAGSVGAYPPNALVLILPAL
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
VVNRLSRMLVNRLPPNIFIFIFVNGFLASAAGILLTGLVLTGILDAANAFPSEILWTTAL
HHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
PVFILLAWAEAFLSGISTAIFVALKPHWINTFDDNRYLKSDRSIWR
HHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA