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The map label for this gene is dedA [H]

Identifier: 161869935

GI number: 161869935

Start: 968803

End: 969447

Strand: Reverse

Name: dedA [H]

Synonym: NMCC_0967

Alternate gene names: 161869935

Gene position: 969447-968803 (Counterclockwise)

Preceding gene: 161869936

Following gene: 161869934

Centisome position: 45.02

GC content: 51.47

Gene sequence:

>645_bases
GTGCTTGCCTCCGCCATCGACTTCATCCTCCATATCGACCAACACCTGCTCGCGCTGTCGGCGCAATACGGTGTGTGGAT
TTATGCGATTCTGTTTTTGATTGTTTTTTGCGAAACCGGCCTGATTGTTACGCCCTTACTGCCCGGCGATTCGCTGCTGT
TTGCCGCCGGCGGGATTGCCGCGCTGGGCGGTATGGATATTCATTTGATGGTTGCATTATTAAGCCTTGCCGCCATACTC
GGCGACGCGCTCAATTTTACCGTCGGCAAATATTTCGGCGGCAGGCTGTTCGCCAACCCCGATTCTAAAATCTTCCGACG
TGAATATCTCGATAAAACCCACCGTTTTTACGAAAAACACGGCGGCAAAACCATCATCATTGCCCGTTTTATGCCCATCG
TCCGCACCTTCGCCCCCTTCGTCGCCGGTATGGGGAAAATGCACTATGCCAAATTTATCCGCTACAACATCATCGGTGGC
TTGTTGTGGGTTATCCTGTTTTCTTACGCGGGCTATTTCTTTGCCAACTTCCCCGTCGTAAAAAACAATCTGGGCTTGGT
GATGGGCGGCATCATTATTGTTTCCGTCCTGCCGGGTGCAGTTGAAATTGCCCGCGCCAAACTTGCGGTAAAATCCAAAC
GGTAA

Upstream 100 bases:

>100_bases
ACGTGAAATGAATTTGAATAGCCGATGCCGTCTGAAACTTTTCAGACGGCATTTTTCCAATCGGTTAAAATACGCGGTTT
GTTTTTTTTAGGAACGCGCC

Downstream 100 bases:

>100_bases
CTGTTGAGAATTTGTATCATGAATATATTATCTGTAGAAAACGCTTCTTTTGCCATCGGCCACGTTGCCTTGCTCGACAA
AACTTCTTTTCAACTCGACA

Product: putative DedA protein

Products: NA

Alternate protein names: Protein DSG-1 [H]

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MLASAIDFILHIDQHLLALSAQYGVWIYAILFLIVFCETGLIVTPLLPGDSLLFAAGGIAALGGMDIHLMVALLSLAAIL
GDALNFTVGKYFGGRLFANPDSKIFRREYLDKTHRFYEKHGGKTIIIARFMPIVRTFAPFVAGMGKMHYAKFIRYNIIGG
LLWVILFSYAGYFFANFPVVKNNLGLVMGGIIIVSVLPGAVEIARAKLAVKSKR

Sequences:

>Translated_214_residues
MLASAIDFILHIDQHLLALSAQYGVWIYAILFLIVFCETGLIVTPLLPGDSLLFAAGGIAALGGMDIHLMVALLSLAAIL
GDALNFTVGKYFGGRLFANPDSKIFRREYLDKTHRFYEKHGGKTIIIARFMPIVRTFAPFVAGMGKMHYAKFIRYNIIGG
LLWVILFSYAGYFFANFPVVKNNLGLVMGGIIIVSVLPGAVEIARAKLAVKSKR
>Mature_214_residues
MLASAIDFILHIDQHLLALSAQYGVWIYAILFLIVFCETGLIVTPLLPGDSLLFAAGGIAALGGMDIHLMVALLSLAAIL
GDALNFTVGKYFGGRLFANPDSKIFRREYLDKTHRFYEKHGGKTIIIARFMPIVRTFAPFVAGMGKMHYAKFIRYNIIGG
LLWVILFSYAGYFFANFPVVKNNLGLVMGGIIIVSVLPGAVEIARAKLAVKSKR

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=202, Percent_Identity=68.3168316831683, Blast_Score=296, Evalue=6e-82,
Organism=Escherichia coli, GI1789481, Length=154, Percent_Identity=36.3636363636364, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1789384, Length=190, Percent_Identity=30.5263157894737, Blast_Score=93, Evalue=1e-20,
Organism=Escherichia coli, GI1786252, Length=152, Percent_Identity=32.2368421052632, Blast_Score=61, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 23487; Mature: 23487

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLASAIDFILHIDQHLLALSAQYGVWIYAILFLIVFCETGLIVTPLLPGDSLLFAAGGIA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEECCCCHH
ALGGMDIHLMVALLSLAAILGDALNFTVGKYFGGRLFANPDSKIFRREYLDKTHRFYEKH
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHC
GGKTIIIARFMPIVRTFAPFVAGMGKMHYAKFIRYNIIGGLLWVILFSYAGYFFANFPVV
CCCEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KNNLGLVMGGIIIVSVLPGAVEIARAKLAVKSKR
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLASAIDFILHIDQHLLALSAQYGVWIYAILFLIVFCETGLIVTPLLPGDSLLFAAGGIA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEECCCCHH
ALGGMDIHLMVALLSLAAILGDALNFTVGKYFGGRLFANPDSKIFRREYLDKTHRFYEKH
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHHHHC
GGKTIIIARFMPIVRTFAPFVAGMGKMHYAKFIRYNIIGGLLWVILFSYAGYFFANFPVV
CCCEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KNNLGLVMGGIIIVSVLPGAVEIARAKLAVKSKR
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]