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The map label for this gene is trpH [H]

Identifier: 161869394

GI number: 161869394

Start: 411085

End: 411921

Strand: Direct

Name: trpH [H]

Synonym: NMCC_0401

Alternate gene names: 161869394

Gene position: 411085-411921 (Clockwise)

Preceding gene: 161869393

Following gene: 161869398

Centisome position: 19.09

GC content: 59.74

Gene sequence:

>837_bases
ATGATAGACCTGCACTGCCATTCCACCGTTTCCGACGGTATGCTTTCCCCCGCCGAAGTCGTGCGCCTCGCGCATCAAAA
CGGCTGCACGCTGCTGGCGTTGACCGACCATGACCACACCGGCGGCATCGCCGAAGCGCGTGCCGAAGCCGACAGGCTCG
ATTTGCGCCTGATTAACGGTGTGGAAATCTCCGTAACGTGGCGCGGGCGTACCATACACGTTGTCGGTTTGGATTTCGAC
GAGCAGGACGAAAACCTGCAAAACTTGTTGGCGCAAGTGCGGCAAGGCCGTCTGAAACGTCTTGAAGCCATCGCCGCCAA
GCTCGAAAAGAAAGGCATCGGCGGCGCATACGACGGCGCGCTGGCACTGGCGGCAAACAAAGAAATGGTCAGCCGCACCC
ACGTCGCCGAGTTCCTCATCCAAGCGGGACACGTCAAAAACAAGCAGCAGGCGTTCACCAAATACTTGGGTGACGGCAAA
TCCTGCGCCGTCCGACACGAATGGGCGACGCTGGAAGACTGCGTATCCGCCGTCAACGGCGCGGGCGGCATGGCAGTCAT
CGCCCACCCCATGCGCTACGATTTGTCCGCCACCGCCAAGCGCAATCTGTTTGAAGAATTTAAAAAACTCGGCGGCGCGG
GTATCGAAGTCCACAGCGGAAACTGTTGCAAAAACGACCGCCTCAACTACGCGCTTTTGGCAGAACGCTTCGGCATGCTC
GCCAGCGCGGGCAGCGACTTCCACCGTTTAAACGACTTCGGCGGCGGCATTCTCGGCGCGTGTCCCGAGCTGCCGGAAAA
CTGTAGGCCGGTGTGGGCGCATTTTTCCCGACATTGA

Upstream 100 bases:

>100_bases
CTTTGAATTTGCCATACACCGGTTTTTTAAAATGACCGTCGCCGCCACACTGCCCGACAATATTGCCCCCGACCTTCATT
CACCACACATATAACACCCC

Downstream 100 bases:

>100_bases
ATGCGGATAAAAATGCCGTCTGAAAGGCTTTCAGACGGCATTTTTTGCGTTTTAAACGTTGTCGTACAGTTTTCGGACGG
TTTTACCGATGGCGGCAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MIDLHCHSTVSDGMLSPAEVVRLAHQNGCTLLALTDHDHTGGIAEARAEADRLDLRLINGVEISVTWRGRTIHVVGLDFD
EQDENLQNLLAQVRQGRLKRLEAIAAKLEKKGIGGAYDGALALAANKEMVSRTHVAEFLIQAGHVKNKQQAFTKYLGDGK
SCAVRHEWATLEDCVSAVNGAGGMAVIAHPMRYDLSATAKRNLFEEFKKLGGAGIEVHSGNCCKNDRLNYALLAERFGML
ASAGSDFHRLNDFGGGILGACPELPENCRPVWAHFSRH

Sequences:

>Translated_278_residues
MIDLHCHSTVSDGMLSPAEVVRLAHQNGCTLLALTDHDHTGGIAEARAEADRLDLRLINGVEISVTWRGRTIHVVGLDFD
EQDENLQNLLAQVRQGRLKRLEAIAAKLEKKGIGGAYDGALALAANKEMVSRTHVAEFLIQAGHVKNKQQAFTKYLGDGK
SCAVRHEWATLEDCVSAVNGAGGMAVIAHPMRYDLSATAKRNLFEEFKKLGGAGIEVHSGNCCKNDRLNYALLAERFGML
ASAGSDFHRLNDFGGGILGACPELPENCRPVWAHFSRH
>Mature_278_residues
MIDLHCHSTVSDGMLSPAEVVRLAHQNGCTLLALTDHDHTGGIAEARAEADRLDLRLINGVEISVTWRGRTIHVVGLDFD
EQDENLQNLLAQVRQGRLKRLEAIAAKLEKKGIGGAYDGALALAANKEMVSRTHVAEFLIQAGHVKNKQQAFTKYLGDGK
SCAVRHEWATLEDCVSAVNGAGGMAVIAHPMRYDLSATAKRNLFEEFKKLGGAGIEVHSGNCCKNDRLNYALLAERFGML
ASAGSDFHRLNDFGGGILGACPELPENCRPVWAHFSRH

Specific function: Unknown

COG id: COG0613

COG function: function code R; Predicted metal-dependent phosphoesterases (PHP family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trpH family [H]

Homologues:

Organism=Escherichia coli, GI1787520, Length=251, Percent_Identity=41.4342629482072, Blast_Score=176, Evalue=1e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: NA

Molecular weight: Translated: 30232; Mature: 30232

Theoretical pI: Translated: 7.02; Mature: 7.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDLHCHSTVSDGMLSPAEVVRLAHQNGCTLLALTDHDHTGGIAEARAEADRLDLRLING
CEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCEEEECC
VEISVTWRGRTIHVVGLDFDEQDENLQNLLAQVRQGRLKRLEAIAAKLEKKGIGGAYDGA
EEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE
LALAANKEMVSRTHVAEFLIQAGHVKNKQQAFTKYLGDGKSCAVRHEWATLEDCVSAVNG
EEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCC
AGGMAVIAHPMRYDLSATAKRNLFEEFKKLGGAGIEVHSGNCCKNDRLNYALLAERFGML
CCCEEEEECCHHCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHH
ASAGSDFHRLNDFGGGILGACPELPENCRPVWAHFSRH
HHCCCHHHHHHHHCCCHHCCCCCCCCCCCHHHHHCCCC
>Mature Secondary Structure
MIDLHCHSTVSDGMLSPAEVVRLAHQNGCTLLALTDHDHTGGIAEARAEADRLDLRLING
CEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCEEEECC
VEISVTWRGRTIHVVGLDFDEQDENLQNLLAQVRQGRLKRLEAIAAKLEKKGIGGAYDGA
EEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCE
LALAANKEMVSRTHVAEFLIQAGHVKNKQQAFTKYLGDGKSCAVRHEWATLEDCVSAVNG
EEEECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCC
AGGMAVIAHPMRYDLSATAKRNLFEEFKKLGGAGIEVHSGNCCKNDRLNYALLAERFGML
CCCEEEEECCHHCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHH
ASAGSDFHRLNDFGGGILGACPELPENCRPVWAHFSRH
HHCCCHHHHHHHHCCCHHCCCCCCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]