Click here to switch to the map view.

The map label for this gene is atpH [H]

Identifier: 161869276

GI number: 161869276

Start: 288038

End: 288571

Strand: Direct

Name: atpH [H]

Synonym: NMCC_0281

Alternate gene names: 161869276

Gene position: 288038-288571 (Clockwise)

Preceding gene: 161869275

Following gene: 161869277

Centisome position: 13.38

GC content: 45.88

Gene sequence:

>534_bases
ATGGCAGAGTTCGCAACGATTGCCAGACCTTATGCAAAGGCATTGTTCGGTCTGGCTCAGGAAAAAAGCCAAATTGAGTC
TTGGTTGGGCGGACTGGAAAAACTTGCGGCGGTTGTTCAGGAAGGGAAGGTGGCTTCATTGATTGACCGTCCTGAAACGA
ATGCTTCAGAAAAAGCAGATATCCTCATCGATTTGGTCGGTTTGAAAGACAAGGAGTTGAAAAACTTTGTTATCGTCTTG
GCCGGGCAGAAACGTTTGTCGATATTGCCGGAAGTATATGCTCAATATCAAGACTTGACCTTATCATTCAACCATATCAA
ATCTGCCGTCATTTACAGTGCCTATCCGTTGACCGACAAACAGGTCGGCGAGTTGGCGCAAATGCTGAATAAGCGTTTCG
ACAGCGAGCTGAAAATCTCTGTCGAAATCGAACCGGAGCTGATTGGCGGCATAAAAGTTGAAGTGGGTGATCAGGTTTTG
GATTTGTCTGTACGAGGCAAATTGAGTGCCTTGTACACGACTATGACGAATTAG

Upstream 100 bases:

>100_bases
GTGTTGGCTGTCAAAGGTGCCGAATCTATTTTGCGCAGCGAAGTCGATGCTTCCAAACACGCAAAACTGCTCGATACCCT
GAAACAGGAGCTGTAATCTT

Downstream 100 bases:

>100_bases
GAGAGTTTTCATGCAGCTTAATCCTGCTGAAATTAGCGATTTGATTAAAGCCAAGATCGAAAATCTGTCTGTAAATGCCG
AAGTGCGTACTCGTGGTACG

Product: F0F1 ATP synthase subunit delta

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta [H]

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MAEFATIARPYAKALFGLAQEKSQIESWLGGLEKLAAVVQEGKVASLIDRPETNASEKADILIDLVGLKDKELKNFVIVL
AGQKRLSILPEVYAQYQDLTLSFNHIKSAVIYSAYPLTDKQVGELAQMLNKRFDSELKISVEIEPELIGGIKVEVGDQVL
DLSVRGKLSALYTTMTN

Sequences:

>Translated_177_residues
MAEFATIARPYAKALFGLAQEKSQIESWLGGLEKLAAVVQEGKVASLIDRPETNASEKADILIDLVGLKDKELKNFVIVL
AGQKRLSILPEVYAQYQDLTLSFNHIKSAVIYSAYPLTDKQVGELAQMLNKRFDSELKISVEIEPELIGGIKVEVGDQVL
DLSVRGKLSALYTTMTN
>Mature_176_residues
AEFATIARPYAKALFGLAQEKSQIESWLGGLEKLAAVVQEGKVASLIDRPETNASEKADILIDLVGLKDKELKNFVIVLA
GQKRLSILPEVYAQYQDLTLSFNHIKSAVIYSAYPLTDKQVGELAQMLNKRFDSELKISVEIEPELIGGIKVEVGDQVLD
LSVRGKLSALYTTMTN

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction [H]

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family [H]

Homologues:

Organism=Escherichia coli, GI1790173, Length=175, Percent_Identity=32.5714285714286, Blast_Score=92, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000711
- InterPro:   IPR020781 [H]

Pfam domain/function: PF00213 OSCP [H]

EC number: 3.6.3.14

Molecular weight: Translated: 19499; Mature: 19368

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: PS00389 ATPASE_DELTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEFATIARPYAKALFGLAQEKSQIESWLGGLEKLAAVVQEGKVASLIDRPETNASEKAD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCE
ILIDLVGLKDKELKNFVIVLAGQKRLSILPEVYAQYQDLTLSFNHIKSAVIYSAYPLTDK
EEEEEECCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHEEEHHHHHHHHHHCCCCCCHH
QVGELAQMLNKRFDSELKISVEIEPELIGGIKVEVGDQVLDLSVRGKLSALYTTMTN
HHHHHHHHHHHHCCCCEEEEEEECHHHHCCEEEEECCEEEEEECCCHHHHHHEECCC
>Mature Secondary Structure 
AEFATIARPYAKALFGLAQEKSQIESWLGGLEKLAAVVQEGKVASLIDRPETNASEKAD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCE
ILIDLVGLKDKELKNFVIVLAGQKRLSILPEVYAQYQDLTLSFNHIKSAVIYSAYPLTDK
EEEEEECCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHEEEHHHHHHHHHHCCCCCCHH
QVGELAQMLNKRFDSELKISVEIEPELIGGIKVEVGDQVLDLSVRGKLSALYTTMTN
HHHHHHHHHHHHCCCCEEEEEEECHHHHCCEEEEECCEEEEEECCCHHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA