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The map label for this gene is vacJ [C]

Identifier: 161869249

GI number: 161869249

Start: 269252

End: 270079

Strand: Direct

Name: vacJ [C]

Synonym: NMCC_0254

Alternate gene names: 161869249

Gene position: 269252-270079 (Clockwise)

Preceding gene: 161869248

Following gene: 161869250

Centisome position: 12.5

GC content: 57.61

Gene sequence:

>828_bases
ATGAAAAAAACCGCCTATGCCTTCCTCCTGCTGATCGGGTTCGCTTCCGCCCCTGCATTTGCCGAAACCCGCCCCGCCGA
CCCTTATGAAGGCTACAACCGCGCCGTTTTCAAATTCAACGACCAAGCCGACCGCTACATTTTCGCCCCTGCCGCGCGCG
GCTACCGCAAAGTTGCGCCGAAACCCGTCCGCGCCGGCGTGTCCAATTTTTTTAACAACCTGTGCGACGTGGTCAGCTTC
GGCAGCAATATCTTGCGCTTGGACATCAAACGCGCAAGCGAAGACCTTGTCCGCGTCGGCATCAACACCACTTTCGGTTT
GGGCGGGCTTATCGACATCGCCGGCGCGGGCGGCATTCCCGACAATAAAAACACCTTGGGCGACACGTTTGCTTCGTGGG
GATGGAAAAACAGCAATTATTTCGTGTTGCCCGTCTTAGGGCCGTCCACCGTCCGCGACGCGCTCGGCACGGGTATTACC
TCCGTTTATTCGCCCAAGAATATCGTCTTCCGCACCCCTGTCGGACGCTGGGGCACGACTGCCGTATCCGCCGTCAGTAC
GCGCGAAGGTCTGCTCGATTTGACCGACAGTCTGGACGAAGCCGCCATCGACAAATACAGCTACACGCGCGACCTCTATA
TGAAAGTCCGTGCGCGGCAGACCGGTGCAACACCTGCCGAAGGTACGGAAGATAACATCGACATCGACGAATTGGTCGAA
AGTGCCGAAACCGGCGCGGCGGAAACTGCCGTTCAAGAAGATTCCGTATCCGAAACACAGGCAGAAGCAGCAGGGGAAGC
CGAAACGCAACCTGGAACACAACCTTAA

Upstream 100 bases:

>100_bases
AAGTGCTGCGCGGTTGCAAAGGCAGCGTCAGGCTGACCGGCATTCCCGAATCCGTGCGCGCGCTGTCCGAACTGTACGAA
ATCAAAGACTGGCTGAAATC

Downstream 100 bases:

>100_bases
AGCCATGCCGTCTGAAAATCCGTGTTCGGACGGCATTCCCTTCTGTCGGAACGGACAGTCCGAAACCACAGATTGGGCTA
TAATCTCTTTTTTGCGCATA

Product: VacJ-related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MKKTAYAFLLLIGFASAPAFAETRPADPYEGYNRAVFKFNDQADRYIFAPAARGYRKVAPKPVRAGVSNFFNNLCDVVSF
GSNILRLDIKRASEDLVRVGINTTFGLGGLIDIAGAGGIPDNKNTLGDTFASWGWKNSNYFVLPVLGPSTVRDALGTGIT
SVYSPKNIVFRTPVGRWGTTAVSAVSTREGLLDLTDSLDEAAIDKYSYTRDLYMKVRARQTGATPAEGTEDNIDIDELVE
SAETGAAETAVQEDSVSETQAEAAGEAETQPGTQP

Sequences:

>Translated_275_residues
MKKTAYAFLLLIGFASAPAFAETRPADPYEGYNRAVFKFNDQADRYIFAPAARGYRKVAPKPVRAGVSNFFNNLCDVVSF
GSNILRLDIKRASEDLVRVGINTTFGLGGLIDIAGAGGIPDNKNTLGDTFASWGWKNSNYFVLPVLGPSTVRDALGTGIT
SVYSPKNIVFRTPVGRWGTTAVSAVSTREGLLDLTDSLDEAAIDKYSYTRDLYMKVRARQTGATPAEGTEDNIDIDELVE
SAETGAAETAVQEDSVSETQAEAAGEAETQPGTQP
>Mature_275_residues
MKKTAYAFLLLIGFASAPAFAETRPADPYEGYNRAVFKFNDQADRYIFAPAARGYRKVAPKPVRAGVSNFFNNLCDVVSF
GSNILRLDIKRASEDLVRVGINTTFGLGGLIDIAGAGGIPDNKNTLGDTFASWGWKNSNYFVLPVLGPSTVRDALGTGIT
SVYSPKNIVFRTPVGRWGTTAVSAVSTREGLLDLTDSLDEAAIDKYSYTRDLYMKVRARQTGATPAEGTEDNIDIDELVE
SAETGAAETAVQEDSVSETQAEAAGEAETQPGTQP

Specific function: Unknown

COG id: COG2853

COG function: function code M; Surface lipoprotein

Gene ontology:

Cell location: Attached To The Outer Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaA family [H]

Homologues:

Organism=Escherichia coli, GI1788688, Length=212, Percent_Identity=32.5471698113208, Blast_Score=94, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007428 [H]

Pfam domain/function: PF04333 VacJ [H]

EC number: NA

Molecular weight: Translated: 29513; Mature: 29513

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTAYAFLLLIGFASAPAFAETRPADPYEGYNRAVFKFNDQADRYIFAPAARGYRKVAP
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCHHHCCC
KPVRAGVSNFFNNLCDVVSFGSNILRLDIKRASEDLVRVGINTTFGLGGLIDIAGAGGIP
CHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCC
DNKNTLGDTFASWGWKNSNYFVLPVLGPSTVRDALGTGITSVYSPKNIVFRTPVGRWGTT
CCCCHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHCCHHHHCCCCCEEEECCCCCCCCH
AVSAVSTREGLLDLTDSLDEAAIDKYSYTRDLYMKVRARQTGATPAEGTEDNIDIDELVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
SAETGAAETAVQEDSVSETQAEAAGEAETQPGTQP
HHHCCCHHHHHHHCCHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKKTAYAFLLLIGFASAPAFAETRPADPYEGYNRAVFKFNDQADRYIFAPAARGYRKVAP
CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCHHHCCC
KPVRAGVSNFFNNLCDVVSFGSNILRLDIKRASEDLVRVGINTTFGLGGLIDIAGAGGIP
CHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCC
DNKNTLGDTFASWGWKNSNYFVLPVLGPSTVRDALGTGITSVYSPKNIVFRTPVGRWGTT
CCCCHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHCCHHHHCCCCCEEEECCCCCCCCH
AVSAVSTREGLLDLTDSLDEAAIDKYSYTRDLYMKVRARQTGATPAEGTEDNIDIDELVE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
SAETGAAETAVQEDSVSETQAEAAGEAETQPGTQP
HHHCCCHHHHHHHCCHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA