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The map label for this gene is yciM [H]

Identifier: 161525424

GI number: 161525424

Start: 2467953

End: 2469125

Strand: Reverse

Name: yciM [H]

Synonym: Bmul_2254

Alternate gene names: 161525424

Gene position: 2469125-2467953 (Counterclockwise)

Preceding gene: 161525425

Following gene: 161525423

Centisome position: 71.6

GC content: 65.13

Gene sequence:

>1173_bases
ATGGATCTGGATTTCTGGTGGTTGCTCGCGATTCCGGTCGCTTTCGCGCTCGGCTGGGCGGCGTCCCGCTATGACCTGAA
GAGTCTGCTGTCGGAGAGCGCGAACCTGCCGCGCTCGTATTTTCGCGGCCTGAACTTTCTGCTGAACGAACAACCGGACA
AGGCGATCGACGCGTTCATCGAAGTCGCGAAGCTCGATCCCGAAACGGTCGAGCTGCACTTCGCGCTCGGCAACCTGTTC
CGCCGCCGCGGCGAGACGGATCGCGCAATTCGCGTGCACCAGAACCTGCTGAGCCGCACCGACCTGCCCGTCAACGAGCG
CGATCACGCACTGTACGAGCTCGGTCAGGACTTCCTGAAGGCCGGCCTGCTCGATCGCGCCGAGGAGGCGTTTCACAAGC
TCGCCGACGGCGACTATGCGCTCGGTGCGCAGCGCGCGCTGCTGACGATCTACGAGATCGAGAAGGACTGGAACAAGTCG
ATCGATACCGCGAAGCGCATCGAATCGATGAGCGACAAGCCGCTCGGGACCGAAATCGCGCAGTTTCATTGCGAGCTCGC
GCAGGATGCGTTGCAGCGCAAGAACGGCGCGGCCGCGGCCGAACAGCTGCGGCTCGCGCTCGCCGCGAACCCGCAGAACG
TGCGCGCGACGATCCTGTCCGGCGATGCGGCCGACGCGGCCGGCGATCACGCGGCGGCGATCGAGCACTGGAAGCGCGTC
GAAGCGCAGAATCCGGCCTATCTGCCGCTCGTCGCCGACAAGCTGATGAAGGCGTACGTCGCGCTCGGCAAGGCGGCCGA
GGGTGCGGAGCTGCTGATGGGCTACGTCGACCGCTATCCGTCGAACGACCTGCTCGACATCGCGTATCAGCACATCGCGG
GCTTGCGCGGGCAGGACGCCGCGCATACGCTCGCGCGCACGCAGATGGAGAAGTCGCCGAATCTGTCCGGCATGCTGCAT
CTGCTCGATGCGCAGATCGCCGGCGCCGACGAGCCGCGGCGTAAGGAACTTGAAATGATGCGTGCGCTGATCAAGCAGCG
CACCAAAAATCTGCCACGGTATACGTGCCAGAATTGCGGTTTCCGGGCGCGGCTCTTCTACTGGCAATGCCCGGGCTGCA
GCGGCTGGGAAACCTATGCGCCGCGCCGCGTCGAACCTGCGATGCCGGGCTGA

Upstream 100 bases:

>100_bases
AACGCCGGCCGTCGTCGATCAGCCGCCGATGCCGCCCGTCATTTAAACCCCGACACCGCGCGAGTCTCGCGCGGTTTTCG
TCTCTGCTTCGATATTTCGC

Downstream 100 bases:

>100_bases
TCCCGGCCACGGCGCCGACGCATCGCGGTCGTCGCCGGGCGAAGCCCGGCGGCCAAGTTAGTCTATTACCGGGAAGCACC
GGAACATCTATGAAAATCAC

Product: tetratricopeptide repeat protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MDLDFWWLLAIPVAFALGWAASRYDLKSLLSESANLPRSYFRGLNFLLNEQPDKAIDAFIEVAKLDPETVELHFALGNLF
RRRGETDRAIRVHQNLLSRTDLPVNERDHALYELGQDFLKAGLLDRAEEAFHKLADGDYALGAQRALLTIYEIEKDWNKS
IDTAKRIESMSDKPLGTEIAQFHCELAQDALQRKNGAAAAEQLRLALAANPQNVRATILSGDAADAAGDHAAAIEHWKRV
EAQNPAYLPLVADKLMKAYVALGKAAEGAELLMGYVDRYPSNDLLDIAYQHIAGLRGQDAAHTLARTQMEKSPNLSGMLH
LLDAQIAGADEPRRKELEMMRALIKQRTKNLPRYTCQNCGFRARLFYWQCPGCSGWETYAPRRVEPAMPG

Sequences:

>Translated_390_residues
MDLDFWWLLAIPVAFALGWAASRYDLKSLLSESANLPRSYFRGLNFLLNEQPDKAIDAFIEVAKLDPETVELHFALGNLF
RRRGETDRAIRVHQNLLSRTDLPVNERDHALYELGQDFLKAGLLDRAEEAFHKLADGDYALGAQRALLTIYEIEKDWNKS
IDTAKRIESMSDKPLGTEIAQFHCELAQDALQRKNGAAAAEQLRLALAANPQNVRATILSGDAADAAGDHAAAIEHWKRV
EAQNPAYLPLVADKLMKAYVALGKAAEGAELLMGYVDRYPSNDLLDIAYQHIAGLRGQDAAHTLARTQMEKSPNLSGMLH
LLDAQIAGADEPRRKELEMMRALIKQRTKNLPRYTCQNCGFRARLFYWQCPGCSGWETYAPRRVEPAMPG
>Mature_390_residues
MDLDFWWLLAIPVAFALGWAASRYDLKSLLSESANLPRSYFRGLNFLLNEQPDKAIDAFIEVAKLDPETVELHFALGNLF
RRRGETDRAIRVHQNLLSRTDLPVNERDHALYELGQDFLKAGLLDRAEEAFHKLADGDYALGAQRALLTIYEIEKDWNKS
IDTAKRIESMSDKPLGTEIAQFHCELAQDALQRKNGAAAAEQLRLALAANPQNVRATILSGDAADAAGDHAAAIEHWKRV
EAQNPAYLPLVADKLMKAYVALGKAAEGAELLMGYVDRYPSNDLLDIAYQHIAGLRGQDAAHTLARTQMEKSPNLSGMLH
LLDAQIAGADEPRRKELEMMRALIKQRTKNLPRYTCQNCGFRARLFYWQCPGCSGWETYAPRRVEPAMPG

Specific function: Unknown

COG id: COG2956

COG function: function code G; Predicted N-acetylglucosaminyl transferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 6 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI2367116, Length=375, Percent_Identity=38.1333333333333, Blast_Score=258, Evalue=4e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43658; Mature: 43658

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLDFWWLLAIPVAFALGWAASRYDLKSLLSESANLPRSYFRGLNFLLNEQPDKAIDAFI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHH
EVAKLDPETVELHFALGNLFRRRGETDRAIRVHQNLLSRTDLPVNERDHALYELGQDFLK
HHHHCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
AGLLDRAEEAFHKLADGDYALGAQRALLTIYEIEKDWNKSIDTAKRIESMSDKPLGTEIA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHH
QFHCELAQDALQRKNGAAAAEQLRLALAANPQNVRATILSGDAADAAGDHAAAIEHWKRV
HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHH
EAQNPAYLPLVADKLMKAYVALGKAAEGAELLMGYVDRYPSNDLLDIAYQHIAGLRGQDA
CCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHH
AHTLARTQMEKSPNLSGMLHLLDAQIAGADEPRRKELEMMRALIKQRTKNLPRYTCQNCG
HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCC
FRARLFYWQCPGCSGWETYAPRRVEPAMPG
CEEEEEEEECCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDLDFWWLLAIPVAFALGWAASRYDLKSLLSESANLPRSYFRGLNFLLNEQPDKAIDAFI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHH
EVAKLDPETVELHFALGNLFRRRGETDRAIRVHQNLLSRTDLPVNERDHALYELGQDFLK
HHHHCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
AGLLDRAEEAFHKLADGDYALGAQRALLTIYEIEKDWNKSIDTAKRIESMSDKPLGTEIA
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHH
QFHCELAQDALQRKNGAAAAEQLRLALAANPQNVRATILSGDAADAAGDHAAAIEHWKRV
HHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHH
EAQNPAYLPLVADKLMKAYVALGKAAEGAELLMGYVDRYPSNDLLDIAYQHIAGLRGQDA
CCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHH
AHTLARTQMEKSPNLSGMLHLLDAQIAGADEPRRKELEMMRALIKQRTKNLPRYTCQNCG
HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCC
FRARLFYWQCPGCSGWETYAPRRVEPAMPG
CEEEEEEEECCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]