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The map label for this gene is ycjC [C]

Identifier: 161525328

GI number: 161525328

Start: 2373725

End: 2374399

Strand: Direct

Name: ycjC [C]

Synonym: Bmul_2158

Alternate gene names: 161525328

Gene position: 2373725-2374399 (Clockwise)

Preceding gene: 161525325

Following gene: 161525329

Centisome position: 68.83

GC content: 69.48

Gene sequence:

>675_bases
ATGGTTCACTGCGAAGCGTTGACCGCTCATTCCATTTTGCTGGAAAATCCCTCCATCATGCAGGAATCTCCGCCTCCCAC
CGCCGACGACGCGGGCATCAACGAGCGCATCGCACGACGCGTACGCGAGCTACGCACGCTGCGCGGCTACACGCTCGACG
CGCTCGCCGCGCGCTGCGGCGTGAGCCGCTCGATGATTTCGCTGATCGAACGCGCGGCGGCCAGTCCGACCGCCGTCGTG
CTCGACAAGCTCGCGGCCGGGCTCGGCATTTCGCTGGCCGGGTTGTTCGGCGGCGACGACGGCGCGCCCGCGCAGCCGCT
CGTGCGGCGCGCGCAGCAGGCCGAATGGCGCGACCCGGCGTCCGGCTATGCGCGACGCAATCTGTCGCCGCCCGGCTGGC
CGTCGCCGCTTCAGCTCGTCGAAGTCGACTTCCCGCCCGGCGCGCGCGTCGCGTACGACACCGGTGCGCGCGAGATCGCG
TGGCACCAGCAGATCTGGGTCGTACGCGGCCGCATCGACGTCACGCTCGGCGCGACGCTGCATCAGCTTCACGAAGGCGA
CTGTCTGGCCATGCGGCTCGATCAGCCGCTGATCTTCAGCAACCCGTCGCTGCATGCCGCACGGTATATCGTCGCGATCT
GCGATGCATCGGCCGCCGCGACCCGGGCCGCATGA

Upstream 100 bases:

>100_bases
ATGCGAAGTGTAGTCGGAACGTATAATACGCTGCGTGCCGGCCGGCGGCAAGCCGCTTCGTCGCGTGGATGAGTGGCGCA
GGCGCGATGCGGGCGTGTCG

Downstream 100 bases:

>100_bases
TGCAACGGCGATCCGTGCGCGGCCCGTCCGCCCCATGTCTACAGGAGCTCGAATGACTTCCCCGAACCCGCCGCAGCGCG
ACGACGTGCGCCTGATCGAT

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator; Transcriptional Regulator XRE Family; Transcriptional Regulator Protein; Helix-Turn-Helix Domain Protein; Xre Family xin-Antitoxin System Antitoxin Component; Transcription Regulator Protein; Transcriptional Regulatory Protein; Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Family Protein; Transcriptional Regulator With Cupin 2 Conserved Barrel; Transcriptional Regulator Protein LacI Family; HTH-Type Transcriptional Regulatory Protein; Transcriptional Regulator XRE Family With Cupin Sensor; Transcriptional Regulatory Protein With Hth Domain

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MVHCEALTAHSILLENPSIMQESPPPTADDAGINERIARRVRELRTLRGYTLDALAARCGVSRSMISLIERAAASPTAVV
LDKLAAGLGISLAGLFGGDDGAPAQPLVRRAQQAEWRDPASGYARRNLSPPGWPSPLQLVEVDFPPGARVAYDTGAREIA
WHQQIWVVRGRIDVTLGATLHQLHEGDCLAMRLDQPLIFSNPSLHAARYIVAICDASAAATRAA

Sequences:

>Translated_224_residues
MVHCEALTAHSILLENPSIMQESPPPTADDAGINERIARRVRELRTLRGYTLDALAARCGVSRSMISLIERAAASPTAVV
LDKLAAGLGISLAGLFGGDDGAPAQPLVRRAQQAEWRDPASGYARRNLSPPGWPSPLQLVEVDFPPGARVAYDTGAREIA
WHQQIWVVRGRIDVTLGATLHQLHEGDCLAMRLDQPLIFSNPSLHAARYIVAICDASAAATRAA
>Mature_224_residues
MVHCEALTAHSILLENPSIMQESPPPTADDAGINERIARRVRELRTLRGYTLDALAARCGVSRSMISLIERAAASPTAVV
LDKLAAGLGISLAGLFGGDDGAPAQPLVRRAQQAEWRDPASGYARRNLSPPGWPSPLQLVEVDFPPGARVAYDTGAREIA
WHQQIWVVRGRIDVTLGATLHQLHEGDCLAMRLDQPLIFSNPSLHAARYIVAICDASAAATRAA

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24053; Mature: 24053

Theoretical pI: Translated: 7.11; Mature: 7.11

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVHCEALTAHSILLENPSIMQESPPPTADDAGINERIARRVRELRTLRGYTLDALAARCG
CEECCCCHHHHHEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHC
VSRSMISLIERAAASPTAVVLDKLAAGLGISLAGLFGGDDGAPAQPLVRRAQQAEWRDPA
CHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCC
SGYARRNLSPPGWPSPLQLVEVDFPPGARVAYDTGAREIAWHQQIWVVRGRIDVTLGATL
HHHHHCCCCCCCCCCCCEEEEEECCCCCEEEECCCCHHHHHHHEEEEEECEEEEEEHHHH
HQLHEGDCLAMRLDQPLIFSNPSLHAARYIVAICDASAAATRAA
HHHCCCCEEEEECCCCEEECCCCHHHHHHHHHEECCCHHHHCCC
>Mature Secondary Structure
MVHCEALTAHSILLENPSIMQESPPPTADDAGINERIARRVRELRTLRGYTLDALAARCG
CEECCCCHHHHHEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHC
VSRSMISLIERAAASPTAVVLDKLAAGLGISLAGLFGGDDGAPAQPLVRRAQQAEWRDPA
CHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCC
SGYARRNLSPPGWPSPLQLVEVDFPPGARVAYDTGAREIAWHQQIWVVRGRIDVTLGATL
HHHHHCCCCCCCCCCCCEEEEEECCCCCEEEECCCCHHHHHHHEEEEEECEEEEEEHHHH
HQLHEGDCLAMRLDQPLIFSNPSLHAARYIVAICDASAAATRAA
HHHCCCCEEEEECCCCEEECCCCHHHHHHHHHEECCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA