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The map label for this gene is ywnA [H]

Identifier: 161525268

GI number: 161525268

Start: 2302716

End: 2303171

Strand: Reverse

Name: ywnA [H]

Synonym: Bmul_2098

Alternate gene names: 161525268

Gene position: 2303171-2302716 (Counterclockwise)

Preceding gene: 161525269

Following gene: 161525267

Centisome position: 66.79

GC content: 70.61

Gene sequence:

>456_bases
ATGAATACCAGCAGCCGCTTCGCGTTTGCCGTTCACGTGCTCGCCTTGCTGTCGATGCAGGAAGGCGTGCCGCTGTCGTC
GGACATCATCGCGGGCAGCGTGAACACGAATCCGGCGCTGATCCGCCGGCTGCTGTCGATGCTCGCGGCGGCGGGACTCA
CCACGTCGCAGCTCGGCGCGGGCGGCGGCGCGCTGCTCGCGCGCGAGCCGGGCGAGATCACACTGCTCGACGTCTATCGC
GCGGTCGACGATGCGCAACTGTTCGCGCTGCACCGCGAGGCGCCGAATCCCGCGTGTCTCGTCGGGCGGCATATCCAGGG
CGTGCTGACCGGTTATATCGGCGACGCGCAGCGTGCGATGGAAGCGTCGCTCGCCTCGCGCACGCTGGCCGACGTGACGG
TCGACGTACTCGACGCCGAACGGCGCGGCCCGCGTGCGGCCGGCGCGGGCGGGTAG

Upstream 100 bases:

>100_bases
CAGCAATCCGTGACGCGCCGCTTGCAGAATCCATAAACTGTAATTATCATGGTTACATATTGAGCCGGCGCGTGGCGCGA
CGGCGTCGAGTGAGTGTGGA

Downstream 100 bases:

>100_bases
GGGCAGCGGCAATAGACGACGCAGGCAGTCGGCGTCGGCACGTGCGGGGCGGTCGCCCCGTTTTTTGCGGTCTTATATGT
AATCAATTACGTTACATTTA

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MNTSSRFAFAVHVLALLSMQEGVPLSSDIIAGSVNTNPALIRRLLSMLAAAGLTTSQLGAGGGALLAREPGEITLLDVYR
AVDDAQLFALHREAPNPACLVGRHIQGVLTGYIGDAQRAMEASLASRTLADVTVDVLDAERRGPRAAGAGG

Sequences:

>Translated_151_residues
MNTSSRFAFAVHVLALLSMQEGVPLSSDIIAGSVNTNPALIRRLLSMLAAAGLTTSQLGAGGGALLAREPGEITLLDVYR
AVDDAQLFALHREAPNPACLVGRHIQGVLTGYIGDAQRAMEASLASRTLADVTVDVLDAERRGPRAAGAGG
>Mature_151_residues
MNTSSRFAFAVHVLALLSMQEGVPLSSDIIAGSVNTNPALIRRLLSMLAAAGLTTSQLGAGGGALLAREPGEITLLDVYR
AVDDAQLFALHREAPNPACLVGRHIQGVLTGYIGDAQRAMEASLASRTLADVTVDVLDAERRGPRAAGAGG

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 15590; Mature: 15590

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTSSRFAFAVHVLALLSMQEGVPLSSDIIAGSVNTNPALIRRLLSMLAAAGLTTSQLGA
CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCHHHCCC
GGGALLAREPGEITLLDVYRAVDDAQLFALHREAPNPACLVGRHIQGVLTGYIGDAQRAM
CCCEEEECCCCCEEEHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHH
EASLASRTLADVTVDVLDAERRGPRAAGAGG
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MNTSSRFAFAVHVLALLSMQEGVPLSSDIIAGSVNTNPALIRRLLSMLAAAGLTTSQLGA
CCCCHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCHHHCCC
GGGALLAREPGEITLLDVYRAVDDAQLFALHREAPNPACLVGRHIQGVLTGYIGDAQRAM
CCCEEEECCCCCEEEHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHH
EASLASRTLADVTVDVLDAERRGPRAAGAGG
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9150240; 9384377 [H]