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The map label for this gene is 161525135

Identifier: 161525135

GI number: 161525135

Start: 2162711

End: 2163829

Strand: Reverse

Name: 161525135

Synonym: Bmul_1963

Alternate gene names: NA

Gene position: 2163829-2162711 (Counterclockwise)

Preceding gene: 161525136

Following gene: 161525134

Centisome position: 62.75

GC content: 68.54

Gene sequence:

>1119_bases
ATGCGGACAACCTCGCTGGCGCTCTGCGGCGCCACGCTCGCGCTCGCGTCGGGCGCCGCGTTGGCGGCCGACTCGTCGGT
GACGCTGTACGGCATTGCCGACACGTTCATCCAGTATCTGGGCAACGGCGGCGCGCATTCGTTTGCGGAGCGCAGCGGCG
GCTCGTCGACGTCGGTGTTCGGGCTGACCGGCACCGAGGATCTCGGCGGCGGCCTGCGCGTGCGCTTCGTGCTCGAGAAC
GGCTTCAACGTCAACAACGGTTCGCTGTACCTCGACAGCACCGCGATGTTCGTCCGTCAGTCGTGGATCGGCCTGCAGCA
CGATCGCTACGGCACGCTGTCGTTCGGTCGCCAGTACGGGCCCGGCTTCTATCTCGTCTATCCGACCGACCCGTTCGGAC
TGAACGATGCGACGTCGCTGTACTCGGGCAACATGGCGACGATCGATCGGCGCACGCTCGCGACGCAGTACGACACGGGC
CGCGCGGACAACTCGATCCTCTATCAGTCGCCGGTGCTCGGCGGCTGGCGGCTGCGCGCGATGTACGCGTTCGCGTCGAG
CGTCACGCAGCCGCTGCGTCGCACGAACGGCAACGAGTTCGGCGCGACGCTGAGCTATTCGGGGCACGGACTGTACGCCG
GCATCGGCTACGGCAACCAGCGCTCGGGCACGCTGTCGTTCCCCGGCTTGCCGGCCGCGCTCGACGTGCCGAGCGCGCAG
TACTTCGGCGCGGCGCTCGGTTACCGGTGGGGTATCGTCAACTTCCAGTTTCATTACACCTACAGCCGGCCGGACGATCC
GTCGCCGGGCTCGCTGACGGCCCGGCTCGACAGCGCCCACCCGTACAGCGTCGTGCAGTTCGGCGCGACGATCGCGGCGA
CGGTATCCGACACGATCGAAGTCGCGGTGGTGCACCGCAATGTGCGCGGCGCGCACGACAATGCGATCGGCGCGGAGCTC
GGCATCGACCATTCGCTGTCGAAGCGCACGAGCGTCTATGCGCGTGCCGGCTGGATCCGCAACAACGGCAGCTCGACGGC
GAGCTGGAGCGGCGTGTCGGTGTCCGCGCCGGGCGCGACGCAGGTGCTCGCGGGCGTCGGCATCACGCACCGGTTCTGA

Upstream 100 bases:

>100_bases
TGCTGCGCCGGCTCGATCGGCGCAATCCCGGCTACGCGAGCTGAGCGGCTGCGCCGCGAGCGCGCGATTCCGACATAACG
ACGAAGCTAAGGAGACACAC

Downstream 100 bases:

>100_bases
GCCGCGCCGCGTGCGACACCTGCCGGCGGCGGCCGGCGACGCCCAATGCACGGTTCGGTTAAAGTCTGCGTGCAGGTAAG
CGTCCCCAACCAGGAGGTGA

Product: porin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MRTTSLALCGATLALASGAALAADSSVTLYGIADTFIQYLGNGGAHSFAERSGGSSTSVFGLTGTEDLGGGLRVRFVLEN
GFNVNNGSLYLDSTAMFVRQSWIGLQHDRYGTLSFGRQYGPGFYLVYPTDPFGLNDATSLYSGNMATIDRRTLATQYDTG
RADNSILYQSPVLGGWRLRAMYAFASSVTQPLRRTNGNEFGATLSYSGHGLYAGIGYGNQRSGTLSFPGLPAALDVPSAQ
YFGAALGYRWGIVNFQFHYTYSRPDDPSPGSLTARLDSAHPYSVVQFGATIAATVSDTIEVAVVHRNVRGAHDNAIGAEL
GIDHSLSKRTSVYARAGWIRNNGSSTASWSGVSVSAPGATQVLAGVGITHRF

Sequences:

>Translated_372_residues
MRTTSLALCGATLALASGAALAADSSVTLYGIADTFIQYLGNGGAHSFAERSGGSSTSVFGLTGTEDLGGGLRVRFVLEN
GFNVNNGSLYLDSTAMFVRQSWIGLQHDRYGTLSFGRQYGPGFYLVYPTDPFGLNDATSLYSGNMATIDRRTLATQYDTG
RADNSILYQSPVLGGWRLRAMYAFASSVTQPLRRTNGNEFGATLSYSGHGLYAGIGYGNQRSGTLSFPGLPAALDVPSAQ
YFGAALGYRWGIVNFQFHYTYSRPDDPSPGSLTARLDSAHPYSVVQFGATIAATVSDTIEVAVVHRNVRGAHDNAIGAEL
GIDHSLSKRTSVYARAGWIRNNGSSTASWSGVSVSAPGATQVLAGVGITHRF
>Mature_372_residues
MRTTSLALCGATLALASGAALAADSSVTLYGIADTFIQYLGNGGAHSFAERSGGSSTSVFGLTGTEDLGGGLRVRFVLEN
GFNVNNGSLYLDSTAMFVRQSWIGLQHDRYGTLSFGRQYGPGFYLVYPTDPFGLNDATSLYSGNMATIDRRTLATQYDTG
RADNSILYQSPVLGGWRLRAMYAFASSVTQPLRRTNGNEFGATLSYSGHGLYAGIGYGNQRSGTLSFPGLPAALDVPSAQ
YFGAALGYRWGIVNFQFHYTYSRPDDPSPGSLTARLDSAHPYSVVQFGATIAATVSDTIEVAVVHRNVRGAHDNAIGAEL
GIDHSLSKRTSVYARAGWIRNNGSSTASWSGVSVSAPGATQVLAGVGITHRF

Specific function: Forms anion selective channels [H]

COG id: COG3203

COG function: function code M; Outer membrane protein (porin)

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 39390; Mature: 39390

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTTSLALCGATLALASGAALAADSSVTLYGIADTFIQYLGNGGAHSFAERSGGSSTSVF
CCCCCEEHHHHHHHHHCCCEEECCCCEEEEEHHHHHHHHHCCCCCCHHHHHCCCCCCEEE
GLTGTEDLGGGLRVRFVLENGFNVNNGSLYLDSTAMFVRQSWIGLQHDRYGTLSFGRQYG
EECCCCCCCCCEEEEEEEECCCCCCCCCEEEECHHHHHHHHHCCCCCCCCCCHHCCCCCC
PGFYLVYPTDPFGLNDATSLYSGNMATIDRRTLATQYDTGRADNSILYQSPVLGGWRLRA
CCEEEEECCCCCCCCCCHHHHCCCEEEEEHHHEEEECCCCCCCCEEEEECCCCCCHHHHH
MYAFASSVTQPLRRTNGNEFGATLSYSGHGLYAGIGYGNQRSGTLSFPGLPAALDVPSAQ
HHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEECCCCCCCCEEECCCCCCEECCCCHH
YFGAALGYRWGIVNFQFHYTYSRPDDPSPGSLTARLDSAHPYSVVQFGATIAATVSDTIE
HHHHHHHEEEEEEEEEEEEEECCCCCCCCCCEEEEECCCCCEEEEEECCEEEEECCCCEE
VAVVHRNVRGAHDNAIGAELGIDHSLSKRTSVYARAGWIRNNGSSTASWSGVSVSAPGAT
EEEEEECCCCCCCCCCCHHCCCCCCHHHHHEEEEEECEEECCCCCCCCCCCEEEECCCHH
QVLAGVGITHRF
HHHHHCCCCCCC
>Mature Secondary Structure
MRTTSLALCGATLALASGAALAADSSVTLYGIADTFIQYLGNGGAHSFAERSGGSSTSVF
CCCCCEEHHHHHHHHHCCCEEECCCCEEEEEHHHHHHHHHCCCCCCHHHHHCCCCCCEEE
GLTGTEDLGGGLRVRFVLENGFNVNNGSLYLDSTAMFVRQSWIGLQHDRYGTLSFGRQYG
EECCCCCCCCCEEEEEEEECCCCCCCCCEEEECHHHHHHHHHCCCCCCCCCCHHCCCCCC
PGFYLVYPTDPFGLNDATSLYSGNMATIDRRTLATQYDTGRADNSILYQSPVLGGWRLRA
CCEEEEECCCCCCCCCCHHHHCCCEEEEEHHHEEEECCCCCCCCEEEEECCCCCCHHHHH
MYAFASSVTQPLRRTNGNEFGATLSYSGHGLYAGIGYGNQRSGTLSFPGLPAALDVPSAQ
HHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEEEECCCCCCCCEEECCCCCCEECCCCHH
YFGAALGYRWGIVNFQFHYTYSRPDDPSPGSLTARLDSAHPYSVVQFGATIAATVSDTIE
HHHHHHHEEEEEEEEEEEEEECCCCCCCCCCEEEEECCCCCEEEEEECCEEEEECCCCEE
VAVVHRNVRGAHDNAIGAELGIDHSLSKRTSVYARAGWIRNNGSSTASWSGVSVSAPGAT
EEEEEECCCCCCCCCCCHHCCCCCCHHHHHEEEEEECEEECCCCCCCCCCCEEEECCCHH
QVLAGVGITHRF
HHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1658537; 12910271 [H]