| Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010084 |
| Length | 3,448,466 |
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The map label for this gene is yegE [C]
Identifier: 161525114
GI number: 161525114
Start: 2128782
End: 2131199
Strand: Reverse
Name: yegE [C]
Synonym: Bmul_1942
Alternate gene names: 161525114
Gene position: 2131199-2128782 (Counterclockwise)
Preceding gene: 161525115
Following gene: 161525113
Centisome position: 61.8
GC content: 67.54
Gene sequence:
>2418_bases ATGGAAAACATTTCGAGGCTCCAGCGTCAACGCAGCGCGTTTCATGTCTGGCCCTGGAGTCCCGCGCTCGGCATCCTGCC GATCGTGGTCGTGATGGTCGCGCTGGCGGGCTTCGTCGCCGTCAGCCTGATCATCATCATGTCGTTGCGCGTGTACGTCG GCGGCGAAAGCAACTGGTCCAAAGCGCAGAAGGACGCGATCATCCTGTTGAACCGCTACGGCGAGACCGGCGACGAGCGT CTGTTCGACGCGTACGCGAGCACCGACCGCACGCTGCGCTTTCTGACGGTCGCGCGCGCGGCGATGACGGCCGTGCCGCC CGACCACGCGACCGCGCGCGGCGCGATGATCGCGGCCGGCATCAATCCGCTCGATGCGGCCGCGGTCGTCTGGTTCTATC CGGTGCTGGCGAGCTTCGCGCGGCTCGACCCCGCGCTGCAGTACTGGCAGGCGGCCGACCGGCAGCTCGACGCGTTGCGC ACCGTCGCGCATGCGCTGCGCGATGCGGTGAAGGCGCACGACGGGCCGCGCACGCGTGCGCTCGCGCAGCGCGTATGGGA GATCAACTCGCGGATCGAGCCGCTGCCGAAGCGGTTCTCCAGCGAGCTGAGCGCGGAATTCCGCTCGGCCGTCATTCAGC TGTTCCTGTCGTACCTCGCCGCATCGTTGCTGATCGTCTTTCTCGGCGTGCGCTGGGCGGGCCGCGCGCAGCATCAGCAG CGCTCGATCCAGAGCGAGCTCGATCGCAGCCAGGCGCTCGCCGAAGCCGCGCTGCGTTCGGTTGCCGACGCGATCGTCAC GGTCGGTCTGACGAGCGGCATCGAGACCGTCAATCCGGCCGCCGAGCAGTTGCTCGGCACATCGGCGCGCGACTGCATCG GCAAGCCCGTGAACGACGTGCTGGCGCTGATCGATCCGTCGACCGGCATGTCGATCAACCTGCTGCCGTCGCTCAGCAAT AGCGGCGACGCGACGCTGACGCGCGACCTCGAACTGCTCCGCGCCGATGCGCCCGCGGTCGCCGTGCGGGCGTCGCTGTC GCGGATGGACAATGCGCCGGGCCGCTGCGTCGGCTATGTGCTGATCCTGCGCGACATGACGCGCGAATATCAGCTGATCG AGCGGCTGACCTGGCAGGCCTCGCACGATGCGCTGACGGGCCTGATCAACCGCACCGCGTTCGAGCGGCGCGTCGGCGAG GCGCTGAACGCATGCGCGGCGACGGTGCTGCTCGTGCTCGATCTCGACGGCTTCAAGGAGGTCAACGACGTGTGCGGCCA CGCGGCCGGCGACGCGCTGCTGCGCGAAGTCACCGCGGTGTTCCAGCGTTGCCTCGGCGCCGACGACGCGTTCGGCCGCC TCGGCGGCGACGAATTCGGGATCCTGCTGACCGCGACGGGCGGCCCGCTGCCGGACGGCGGCAAGGCCGAGCAGCTTCGC GCGAGCCTCGAGGCGTACACGTTCTGCTGGGACGGCGAGCGCTTCAAGCTGAGCGTCAGCATCGGGATGCTGAATCTCGA CTGCCGGCCCGAAAGCGTCGAGAAGGCGATGCAGCTCGCGGACGTCGCCTGCTACGTCGCGAAGGATCGCGGCCGCAATC GCGTCCACGTCGCCGAGCCGCGCGACATGAGCGCGAGCCGGCAGGCGTATCACCTGGAGTGGAGCCGCCGCGTGAAGGCC GCGCTCGAGTCGAATACGTTCCAGCTGTATGCGCAGCCGATCGTGCCGATCCAGCCGGCGCTCGCCGCGCAGCAGCGCAT CGAGATCCTGCTGCGCATCCCCGACGCCGACGGCAAGCTCGTGTCGCCGGTATTCCTGCCGGCTGCCGAGCGCTACGGGC ACATGACGATGATCGACCGCTGGGTCGTGCGCACCGTCGTGCGGCGACTCGCGCAGCTCGAACGGCGCAGCGACTTCGAA TGCAACGTGAACCTGTCCGCGATGTCGATCACGAACGAAGGCTTCGTCGAGTTCGTGAAGCGCGAGCTGACGACGTCGGG CGTCGATCCGTCGCAGCTGTGTTTCGAGATCACCGAAACGAGCGCCGTGCGCAATCTCGAAGTCGCGTCGCGTTTCATGC ACGAGCTGCGCGATCTCGGCTGCCGGTTCGCGCTCGACGATTTCGGCGCCGGCATGTCGTCGTTTTCCTATCTGAGCAAG CTGCCGATCGATTATCTGAAGATCGACGGCGGCCTCGTATCGCGCATGACGTCGGATTGCGTGAAGCGCGGCATCGTCTG CGCGATCAACGATATCGCGCACCTGCTGCAGTACCGGACCGTTGCGGAGCACGTCGAGGACGAGGAGACGGCCGAGATGC TTCGCTCGCTGGGCGTCGACTACTGCCAGGGCTACTACTTCAGCCGTCCCGCGCGATGGCAGGCCGGGGAGCCTGTACAA CAAGGAGAAGTGGAATGA
Upstream 100 bases:
>100_bases GCTGTAGCGCAAGCAGTCGAAGTCAGCGGCGCAGCCGCGCCGCAAGCAGCGAACACTCCGGGCCGGGAGTGTCGAATAAG CATAAGAACAGTGAATCGGT
Downstream 100 bases:
>100_bases AAGTGCCGTTCGAGAGAACCGGTGAGCTGATGGATCTGGGCAGCTACCCGGCCTGGTTGCGCGACGTGGTCGGCGCGACG GCGGAATTGAAGGAGCGGGT
Product: PAS/PAC sensor(s)-containing diguanylate cyclase/phosphodiesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 805; Mature: 805
Protein sequence:
>805_residues MENISRLQRQRSAFHVWPWSPALGILPIVVVMVALAGFVAVSLIIIMSLRVYVGGESNWSKAQKDAIILLNRYGETGDER LFDAYASTDRTLRFLTVARAAMTAVPPDHATARGAMIAAGINPLDAAAVVWFYPVLASFARLDPALQYWQAADRQLDALR TVAHALRDAVKAHDGPRTRALAQRVWEINSRIEPLPKRFSSELSAEFRSAVIQLFLSYLAASLLIVFLGVRWAGRAQHQQ RSIQSELDRSQALAEAALRSVADAIVTVGLTSGIETVNPAAEQLLGTSARDCIGKPVNDVLALIDPSTGMSINLLPSLSN SGDATLTRDLELLRADAPAVAVRASLSRMDNAPGRCVGYVLILRDMTREYQLIERLTWQASHDALTGLINRTAFERRVGE ALNACAATVLLVLDLDGFKEVNDVCGHAAGDALLREVTAVFQRCLGADDAFGRLGGDEFGILLTATGGPLPDGGKAEQLR ASLEAYTFCWDGERFKLSVSIGMLNLDCRPESVEKAMQLADVACYVAKDRGRNRVHVAEPRDMSASRQAYHLEWSRRVKA ALESNTFQLYAQPIVPIQPALAAQQRIEILLRIPDADGKLVSPVFLPAAERYGHMTMIDRWVVRTVVRRLAQLERRSDFE CNVNLSAMSITNEGFVEFVKRELTTSGVDPSQLCFEITETSAVRNLEVASRFMHELRDLGCRFALDDFGAGMSSFSYLSK LPIDYLKIDGGLVSRMTSDCVKRGIVCAINDIAHLLQYRTVAEHVEDEETAEMLRSLGVDYCQGYYFSRPARWQAGEPVQ QGEVE
Sequences:
>Translated_805_residues MENISRLQRQRSAFHVWPWSPALGILPIVVVMVALAGFVAVSLIIIMSLRVYVGGESNWSKAQKDAIILLNRYGETGDER LFDAYASTDRTLRFLTVARAAMTAVPPDHATARGAMIAAGINPLDAAAVVWFYPVLASFARLDPALQYWQAADRQLDALR TVAHALRDAVKAHDGPRTRALAQRVWEINSRIEPLPKRFSSELSAEFRSAVIQLFLSYLAASLLIVFLGVRWAGRAQHQQ RSIQSELDRSQALAEAALRSVADAIVTVGLTSGIETVNPAAEQLLGTSARDCIGKPVNDVLALIDPSTGMSINLLPSLSN SGDATLTRDLELLRADAPAVAVRASLSRMDNAPGRCVGYVLILRDMTREYQLIERLTWQASHDALTGLINRTAFERRVGE ALNACAATVLLVLDLDGFKEVNDVCGHAAGDALLREVTAVFQRCLGADDAFGRLGGDEFGILLTATGGPLPDGGKAEQLR ASLEAYTFCWDGERFKLSVSIGMLNLDCRPESVEKAMQLADVACYVAKDRGRNRVHVAEPRDMSASRQAYHLEWSRRVKA ALESNTFQLYAQPIVPIQPALAAQQRIEILLRIPDADGKLVSPVFLPAAERYGHMTMIDRWVVRTVVRRLAQLERRSDFE CNVNLSAMSITNEGFVEFVKRELTTSGVDPSQLCFEITETSAVRNLEVASRFMHELRDLGCRFALDDFGAGMSSFSYLSK LPIDYLKIDGGLVSRMTSDCVKRGIVCAINDIAHLLQYRTVAEHVEDEETAEMLRSLGVDYCQGYYFSRPARWQAGEPVQ QGEVE >Mature_805_residues MENISRLQRQRSAFHVWPWSPALGILPIVVVMVALAGFVAVSLIIIMSLRVYVGGESNWSKAQKDAIILLNRYGETGDER LFDAYASTDRTLRFLTVARAAMTAVPPDHATARGAMIAAGINPLDAAAVVWFYPVLASFARLDPALQYWQAADRQLDALR TVAHALRDAVKAHDGPRTRALAQRVWEINSRIEPLPKRFSSELSAEFRSAVIQLFLSYLAASLLIVFLGVRWAGRAQHQQ RSIQSELDRSQALAEAALRSVADAIVTVGLTSGIETVNPAAEQLLGTSARDCIGKPVNDVLALIDPSTGMSINLLPSLSN SGDATLTRDLELLRADAPAVAVRASLSRMDNAPGRCVGYVLILRDMTREYQLIERLTWQASHDALTGLINRTAFERRVGE ALNACAATVLLVLDLDGFKEVNDVCGHAAGDALLREVTAVFQRCLGADDAFGRLGGDEFGILLTATGGPLPDGGKAEQLR ASLEAYTFCWDGERFKLSVSIGMLNLDCRPESVEKAMQLADVACYVAKDRGRNRVHVAEPRDMSASRQAYHLEWSRRVKA ALESNTFQLYAQPIVPIQPALAAQQRIEILLRIPDADGKLVSPVFLPAAERYGHMTMIDRWVVRTVVRRLAQLERRSDFE CNVNLSAMSITNEGFVEFVKRELTTSGVDPSQLCFEITETSAVRNLEVASRFMHELRDLGCRFALDDFGAGMSSFSYLSK LPIDYLKIDGGLVSRMTSDCVKRGIVCAINDIAHLLQYRTVAEHVEDEETAEMLRSLGVDYCQGYYFSRPARWQAGEPVQ QGEVE
Specific function: Unknown
COG id: COG2200
COG function: function code T; FOG: EAL domain
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 MHYT domain [H]
Homologues:
Organism=Escherichia coli, GI1788381, Length=541, Percent_Identity=27.1719038817006, Blast_Score=193, Evalue=5e-50, Organism=Escherichia coli, GI1787541, Length=579, Percent_Identity=27.6338514680484, Blast_Score=181, Evalue=2e-46, Organism=Escherichia coli, GI1788849, Length=238, Percent_Identity=36.5546218487395, Blast_Score=149, Evalue=6e-37, Organism=Escherichia coli, GI87081921, Length=436, Percent_Identity=29.3577981651376, Blast_Score=143, Evalue=3e-35, Organism=Escherichia coli, GI1790496, Length=245, Percent_Identity=34.2857142857143, Blast_Score=130, Evalue=5e-31, Organism=Escherichia coli, GI226510982, Length=443, Percent_Identity=25.2821670428894, Blast_Score=129, Evalue=9e-31, Organism=Escherichia coli, GI87081980, Length=257, Percent_Identity=33.4630350194552, Blast_Score=115, Evalue=9e-27, Organism=Escherichia coli, GI87082096, Length=442, Percent_Identity=24.6606334841629, Blast_Score=108, Evalue=2e-24, Organism=Escherichia coli, GI145693134, Length=160, Percent_Identity=38.75, Blast_Score=104, Evalue=2e-23, Organism=Escherichia coli, GI1788502, Length=237, Percent_Identity=28.6919831223629, Blast_Score=104, Evalue=3e-23, Organism=Escherichia coli, GI87081743, Length=238, Percent_Identity=29.8319327731092, Blast_Score=103, Evalue=3e-23, Organism=Escherichia coli, GI87081845, Length=236, Percent_Identity=30.9322033898305, Blast_Score=102, Evalue=1e-22, Organism=Escherichia coli, GI1786507, Length=245, Percent_Identity=27.7551020408163, Blast_Score=102, Evalue=1e-22, Organism=Escherichia coli, GI1787055, Length=250, Percent_Identity=29.6, Blast_Score=92, Evalue=1e-19, Organism=Escherichia coli, GI87082007, Length=190, Percent_Identity=32.6315789473684, Blast_Score=88, Evalue=2e-18, Organism=Escherichia coli, GI87081881, Length=179, Percent_Identity=36.3128491620112, Blast_Score=88, Evalue=3e-18, Organism=Escherichia coli, GI1787262, Length=179, Percent_Identity=32.4022346368715, Blast_Score=86, Evalue=1e-17, Organism=Escherichia coli, GI1786584, Length=169, Percent_Identity=30.7692307692308, Blast_Score=84, Evalue=4e-17, Organism=Escherichia coli, GI1787802, Length=171, Percent_Identity=29.8245614035088, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1788956, Length=158, Percent_Identity=34.1772151898734, Blast_Score=75, Evalue=2e-14, Organism=Escherichia coli, GI1788085, Length=181, Percent_Identity=28.1767955801105, Blast_Score=68, Evalue=3e-12, Organism=Escherichia coli, GI87081977, Length=171, Percent_Identity=28.6549707602339, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR000160 - InterPro: IPR001633 - InterPro: IPR005330 [H]
Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF03707 MHYT [H]
EC number: NA
Molecular weight: Translated: 88689; Mature: 88689
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50883 EAL ; PS50887 GGDEF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENISRLQRQRSAFHVWPWSPALGILPIVVVMVALAGFVAVSLIIIMSLRVYVGGESNWS CCHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHH KAQKDAIILLNRYGETGDERLFDAYASTDRTLRFLTVARAAMTAVPPDHATARGAMIAAG HHCCCEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHCCCEEEEC INPLDAAAVVWFYPVLASFARLDPALQYWQAADRQLDALRTVAHALRDAVKAHDGPRTRA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH LAQRVWEINSRIEPLPKRFSSELSAEFRSAVIQLFLSYLAASLLIVFLGVRWAGRAQHQQ HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH RSIQSELDRSQALAEAALRSVADAIVTVGLTSGIETVNPAAEQLLGTSARDCIGKPVNDV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHCCCCHHHH LALIDPSTGMSINLLPSLSNSGDATLTRDLELLRADAPAVAVRASLSRMDNAPGRCVGYV HHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHH LILRDMTREYQLIERLTWQASHDALTGLINRTAFERRVGEALNACAATVLLVLDLDGFKE HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH VNDVCGHAAGDALLREVTAVFQRCLGADDAFGRLGGDEFGILLTATGGPLPDGGKAEQLR HHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCEEEEEEECCCCCCCCCCHHHHH ASLEAYTFCWDGERFKLSVSIGMLNLDCRPESVEKAMQLADVACYVAKDRGRNRVHVAEP HHHHHHEEEECCCEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCC RDMSASRQAYHLEWSRRVKAALESNTFQLYAQPIVPIQPALAAQQRIEILLRIPDADGKL CCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHEEEECCCCCCCE VSPVFLPAAERYGHMTMIDRWVVRTVVRRLAQLERRSDFECNVNLSAMSITNEGFVEFVK ECHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCHHHHHHHH RELTTSGVDPSQLCFEITETSAVRNLEVASRFMHELRDLGCRFALDDFGAGMSSFSYLSK HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHCCCHHHHHHHHH LPIDYLKIDGGLVSRMTSDCVKRGIVCAINDIAHLLQYRTVAEHVEDEETAEMLRSLGVD CCCHHEEECCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHH YCQGYYFSRPARWQAGEPVQQGEVE HHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MENISRLQRQRSAFHVWPWSPALGILPIVVVMVALAGFVAVSLIIIMSLRVYVGGESNWS CCHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHH KAQKDAIILLNRYGETGDERLFDAYASTDRTLRFLTVARAAMTAVPPDHATARGAMIAAG HHCCCEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHCCCEEEEC INPLDAAAVVWFYPVLASFARLDPALQYWQAADRQLDALRTVAHALRDAVKAHDGPRTRA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH LAQRVWEINSRIEPLPKRFSSELSAEFRSAVIQLFLSYLAASLLIVFLGVRWAGRAQHQQ HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH RSIQSELDRSQALAEAALRSVADAIVTVGLTSGIETVNPAAEQLLGTSARDCIGKPVNDV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHCCCCHHHH LALIDPSTGMSINLLPSLSNSGDATLTRDLELLRADAPAVAVRASLSRMDNAPGRCVGYV HHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHH LILRDMTREYQLIERLTWQASHDALTGLINRTAFERRVGEALNACAATVLLVLDLDGFKE HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH VNDVCGHAAGDALLREVTAVFQRCLGADDAFGRLGGDEFGILLTATGGPLPDGGKAEQLR HHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCEEEEEEECCCCCCCCCCHHHHH ASLEAYTFCWDGERFKLSVSIGMLNLDCRPESVEKAMQLADVACYVAKDRGRNRVHVAEP HHHHHHEEEECCCEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCC RDMSASRQAYHLEWSRRVKAALESNTFQLYAQPIVPIQPALAAQQRIEILLRIPDADGKL CCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHEEEECCCCCCCE VSPVFLPAAERYGHMTMIDRWVVRTVVRRLAQLERRSDFECNVNLSAMSITNEGFVEFVK ECHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCHHHHHHHH RELTTSGVDPSQLCFEITETSAVRNLEVASRFMHELRDLGCRFALDDFGAGMSSFSYLSK HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHCCCHHHHHHHHH LPIDYLKIDGGLVSRMTSDCVKRGIVCAINDIAHLLQYRTVAEHVEDEETAEMLRSLGVD CCCHHEEECCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHH YCQGYYFSRPARWQAGEPVQQGEVE HHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]