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The map label for this gene is prtR [H]

Identifier: 161525013

GI number: 161525013

Start: 2017037

End: 2017849

Strand: Direct

Name: prtR [H]

Synonym: Bmul_1840

Alternate gene names: 161525013

Gene position: 2017037-2017849 (Clockwise)

Preceding gene: 161524983

Following gene: 161525015

Centisome position: 58.49

GC content: 57.44

Gene sequence:

>813_bases
ATGGCATTTGCACTCGCCGAGCAAGGGGATTTTGATGGCAAAAGCGTTTTAGATCACCATTACAATCGCCATATGCGATC
ACTAGCTCAACGCCTCCGCGACACCCGGGAAGAAAAATCGCTGTCACAAGCTCAGCTTGCGACTCGCGCCGGGGTCTCGC
AGACCACAATCGCCAACGTCGAAAGCGGGCGAAATCAGGGATCAAAACATCTGCTTTCGATAGCTCGGGCCCTCGGAGTG
AATCCGGCGTGGCTTGAGTCGGAGAGCGGGCCTAAGGACGCGAGTGCGGCAGCTGCGCCACAACCTGGCATCTATAAAAT
TCCCGAAGACCAAGGGAACGTCCTGGTGTGGGAGCACCCGGACGACCTGCCGCCTGACGAGAACCGCGTCTGGCTGGACA
GGTACGACTACAGATTCAGTGCGGGGACCGGTTTGATTCAGTGGGAAGTACGGCAGAAGAAGGCTTTACCGTTCGACATC
GGCTTTTTCCGGGCTCTCGGCTCGAAGCCCAAGGATTGCAAGCTCGTGCGCGTGCATGGCGACAGCATGGAGCCCTACCT
GTTCGATCGCGACATGATTATGGTGGACACGGCCAAGAATCACATCCGAGACGGCAAGGTCTACGCGATCTACTTCGAAG
GCGAACCGCTGGTGAAGCAGATCTTCAAGCAAGCCGGCGGATCGATCTGCCTCCACTCCATCAACGCGGGCAAGTATCCC
GACAAGATCGTGACGCCCGAGCTGATGGAGTCGGTGACGATCATGGGTGAAGTGATCTATCGTTCGGGATCGGGTTGGGC
CGGAGGAAACTGA

Upstream 100 bases:

>100_bases
TCGACTGATCGACGCCAGTGCGGCGCTCGATCTCCATTTGTGTAATACCGGACCCCATAAGGTCGGCGATCATGGATTGA
GCGTTCATGCACTCAAGAAT

Downstream 100 bases:

>100_bases
TGAAGATAACGCCTACATGCCGGTACGGTCACGGGGAGTTACAGGAGTCGCCGCGATCGCCAGATAACCATTATTGGGGA
CTTATTGGCGCGACATTGAC

Product: putative phage repressor

Products: NA

Alternate protein names: Pyocin repressor protein [H]

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MAFALAEQGDFDGKSVLDHHYNRHMRSLAQRLRDTREEKSLSQAQLATRAGVSQTTIANVESGRNQGSKHLLSIARALGV
NPAWLESESGPKDASAAAAPQPGIYKIPEDQGNVLVWEHPDDLPPDENRVWLDRYDYRFSAGTGLIQWEVRQKKALPFDI
GFFRALGSKPKDCKLVRVHGDSMEPYLFDRDMIMVDTAKNHIRDGKVYAIYFEGEPLVKQIFKQAGGSICLHSINAGKYP
DKIVTPELMESVTIMGEVIYRSGSGWAGGN

Sequences:

>Translated_270_residues
MAFALAEQGDFDGKSVLDHHYNRHMRSLAQRLRDTREEKSLSQAQLATRAGVSQTTIANVESGRNQGSKHLLSIARALGV
NPAWLESESGPKDASAAAAPQPGIYKIPEDQGNVLVWEHPDDLPPDENRVWLDRYDYRFSAGTGLIQWEVRQKKALPFDI
GFFRALGSKPKDCKLVRVHGDSMEPYLFDRDMIMVDTAKNHIRDGKVYAIYFEGEPLVKQIFKQAGGSICLHSINAGKYP
DKIVTPELMESVTIMGEVIYRSGSGWAGGN
>Mature_269_residues
AFALAEQGDFDGKSVLDHHYNRHMRSLAQRLRDTREEKSLSQAQLATRAGVSQTTIANVESGRNQGSKHLLSIARALGVN
PAWLESESGPKDASAAAAPQPGIYKIPEDQGNVLVWEHPDDLPPDENRVWLDRYDYRFSAGTGLIQWEVRQKKALPFDIG
FFRALGSKPKDCKLVRVHGDSMEPYLFDRDMIMVDTAKNHIRDGKVYAIYFEGEPLVKQIFKQAGGSICLHSINAGKYPD
KIVTPELMESVTIMGEVIYRSGSGWAGGN

Specific function: Represses the promoter activity of the prtN gene [H]

COG id: COG2932

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982
- InterPro:   IPR019759
- InterPro:   IPR015927
- InterPro:   IPR011056 [H]

Pfam domain/function: PF01381 HTH_3; PF00717 Peptidase_S24 [H]

EC number: NA

Molecular weight: Translated: 30045; Mature: 29914

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFALAEQGDFDGKSVLDHHYNRHMRSLAQRLRDTREEKSLSQAQLATRAGVSQTTIANV
CCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEECC
ESGRNQGSKHLLSIARALGVNPAWLESESGPKDASAAAAPQPGIYKIPEDQGNVLVWEHP
CCCCCCCHHHHHHHHHHHCCCHHEECCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEECC
DDLPPDENRVWLDRYDYRFSAGTGLIQWEVRQKKALPFDIGFFRALGSKPKDCKLVRVHG
CCCCCCCCEEEEECCCEEEECCCCEEEEEEHHCCCCCCCHHHHHHHCCCCCCCEEEEEEC
DSMEPYLFDRDMIMVDTAKNHIRDGKVYAIYFEGEPLVKQIFKQAGGSICLHSINAGKYP
CCCCCEEECCCEEEEECCHHHCCCCCEEEEEECCCHHHHHHHHHCCCCEEEEECCCCCCC
DKIVTPELMESVTIMGEVIYRSGSGWAGGN
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
AFALAEQGDFDGKSVLDHHYNRHMRSLAQRLRDTREEKSLSQAQLATRAGVSQTTIANV
CEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEECC
ESGRNQGSKHLLSIARALGVNPAWLESESGPKDASAAAAPQPGIYKIPEDQGNVLVWEHP
CCCCCCCHHHHHHHHHHHCCCHHEECCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEECC
DDLPPDENRVWLDRYDYRFSAGTGLIQWEVRQKKALPFDIGFFRALGSKPKDCKLVRVHG
CCCCCCCCEEEEECCCEEEECCCCEEEEEEHHCCCCCCCHHHHHHHCCCCCCCEEEEEEC
DSMEPYLFDRDMIMVDTAKNHIRDGKVYAIYFEGEPLVKQIFKQAGGSICLHSINAGKYP
CCCCCEEECCCEEEEECCHHHCCCCCEEEEEECCCHHHHHHHHHCCCCEEEEECCCCCCC
DKIVTPELMESVTIMGEVIYRSGSGWAGGN
CCCCCHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8444788; 10984043 [H]