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The map label for this gene is yagA [C]

Identifier: 161524834

GI number: 161524834

Start: 1833119

End: 1833565

Strand: Direct

Name: yagA [C]

Synonym: Bmul_1661

Alternate gene names: 161524834

Gene position: 1833119-1833565 (Clockwise)

Preceding gene: 161524833

Following gene: 161524835

Centisome position: 53.16

GC content: 58.61

Gene sequence:

>447_bases
GTGGTCGACGACTACACGCGCGAGTGCTTGGCCATCGAGGTCGATACTTCATTGCCGGGCCTACGCGTGCAGCAAGTACT
CGCGCGGCTCAAGATGCGAGGCTTACCCGCATCCATCACGGTCGACAACGGACCGGAGTTCGCTGGTAAGGTGCTGGATG
CATGGGCCTACGAAGCCAGTGTCACGCTGTCGTTCATTCGGCCTGGCAAGCCGGTGGAGAATGCCTATATCGAGAGCTTC
AACGAGCGCTTCCGCGACGAATGCCTGAACGAGCACTGGTTCGTCTCAATGCGCCACGCCAAGCGGCTGATTGAGGAATG
GCGTATCGAATACAACACCGAGCGGCCTCATAGTTCGCTCGGCTATCTGACGCCTGCGCAGTTCGCCCGGGCGCACGACG
CGAAGCAGCAGTTTTTAACCTCGGACTCTAACTGTAGTTCAGACTAA

Upstream 100 bases:

>100_bases
GCTGTTCAATTCCGCCAATGTTGATTGATGTCAAAGGATCGGGGGTGAAGGCCCGTGGGATGACGGGCTGGCCTATGGTC
GGCGGTTTCGATGCCTGAAC

Downstream 100 bases:

>100_bases
AACCGGGGCAGGTCAACTGCGTGCTAGCATCAAGCTCCGACATCAGATGGAGCGAGAAAATGGAGATCGAGCTCGTCGAT
ATTGCAGCCAGCCGCCGCCG

Product: integrase catalytic region

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MVDDYTRECLAIEVDTSLPGLRVQQVLARLKMRGLPASITVDNGPEFAGKVLDAWAYEASVTLSFIRPGKPVENAYIESF
NERFRDECLNEHWFVSMRHAKRLIEEWRIEYNTERPHSSLGYLTPAQFARAHDAKQQFLTSDSNCSSD

Sequences:

>Translated_148_residues
MVDDYTRECLAIEVDTSLPGLRVQQVLARLKMRGLPASITVDNGPEFAGKVLDAWAYEASVTLSFIRPGKPVENAYIESF
NERFRDECLNEHWFVSMRHAKRLIEEWRIEYNTERPHSSLGYLTPAQFARAHDAKQQFLTSDSNCSSD
>Mature_148_residues
MVDDYTRECLAIEVDTSLPGLRVQQVLARLKMRGLPASITVDNGPEFAGKVLDAWAYEASVTLSFIRPGKPVENAYIESF
NERFRDECLNEHWFVSMRHAKRLIEEWRIEYNTERPHSSLGYLTPAQFARAHDAKQQFLTSDSNCSSD

Specific function: Unknown

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1786462, Length=133, Percent_Identity=28.5714285714286, Blast_Score=64, Evalue=3e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 16970; Mature: 16970

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDDYTRECLAIEVDTSLPGLRVQQVLARLKMRGLPASITVDNGPEFAGKVLDAWAYEAS
CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHH
VTLSFIRPGKPVENAYIESFNERFRDECLNEHWFVSMRHAKRLIEEWRIEYNTERPHSSL
EEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHCCCCCCCCCCC
GYLTPAQFARAHDAKQQFLTSDSNCSSD
CCCCHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MVDDYTRECLAIEVDTSLPGLRVQQVLARLKMRGLPASITVDNGPEFAGKVLDAWAYEAS
CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHH
VTLSFIRPGKPVENAYIESFNERFRDECLNEHWFVSMRHAKRLIEEWRIEYNTERPHSSL
EEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHCCCCCCCCCCC
GYLTPAQFARAHDAKQQFLTSDSNCSSD
CCCCHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1718819 [H]