Click here to switch to the map view.

The map label for this gene is ybaO [H]

Identifier: 161524676

GI number: 161524676

Start: 1655773

End: 1656237

Strand: Direct

Name: ybaO [H]

Synonym: Bmul_1503

Alternate gene names: 161524676

Gene position: 1655773-1656237 (Clockwise)

Preceding gene: 161524674

Following gene: 161524678

Centisome position: 48.01

GC content: 65.38

Gene sequence:

>465_bases
ATGGAACAACTGGACAAGATCGATCGCGGGATGCTCGACATGCTGCAGCGGGACGGGCGCGTGTCGAATGCGCGGCTCGC
GGAAGCGTTCTCGCTGAGCGAGACGTCGTGCTGGCGCCGGCTCAGGCGCCTCGAGGAAGCGGGGCTGATCGAGGGCTATC
ATGCGCGGCTCGACCGCCGCAAGCTCGGGCTCGGCGTGATGGCGTTCGTGCAGATCGTCTGCACGCAGCACAGCGAAGAG
GTGACGGCCGAATTCGAACGGCTGATCGCCGCGAGCCCGAATGTGCTCGCGTGCGACAACACGACCGGCGAAGCGGATTT
CCTGCTGCAGGTGGTCGCGGCTGATCTCGACGACTACAGCCATTTCGTCGAGAAGGTGCTGCGCAAGCTGCCGGGCGTGC
TGAGCATCCGCTCCAATCTGTCGCTGCGCCAGCTGAAGTCGACGCACCGGCTGCCGATCGTCTGA

Upstream 100 bases:

>100_bases
TAACCGCGCAATATCGGATTTACCTTTCGTTTTTCGATTGAGGCGCGGGCTCTTTTGGGCTAGCCTTGCGACCGATGCGC
CATCGCTGCAAGGAGCTTTC

Downstream 100 bases:

>100_bases
CGCGGGCGGCAGTTAATCGGCCAGCCGTTTGTCGGCGAGCGCCTTGCAGCAGTCGTCGTACACCCACTGCACGAGCTTGG
CGCGATAGTCGAGATCGTCG

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MEQLDKIDRGMLDMLQRDGRVSNARLAEAFSLSETSCWRRLRRLEEAGLIEGYHARLDRRKLGLGVMAFVQIVCTQHSEE
VTAEFERLIAASPNVLACDNTTGEADFLLQVVAADLDDYSHFVEKVLRKLPGVLSIRSNLSLRQLKSTHRLPIV

Sequences:

>Translated_154_residues
MEQLDKIDRGMLDMLQRDGRVSNARLAEAFSLSETSCWRRLRRLEEAGLIEGYHARLDRRKLGLGVMAFVQIVCTQHSEE
VTAEFERLIAASPNVLACDNTTGEADFLLQVVAADLDDYSHFVEKVLRKLPGVLSIRSNLSLRQLKSTHRLPIV
>Mature_154_residues
MEQLDKIDRGMLDMLQRDGRVSNARLAEAFSLSETSCWRRLRRLEEAGLIEGYHARLDRRKLGLGVMAFVQIVCTQHSEE
VTAEFERLIAASPNVLACDNTTGEADFLLQVVAADLDDYSHFVEKVLRKLPGVLSIRSNLSLRQLKSTHRLPIV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081742, Length=150, Percent_Identity=41.3333333333333, Blast_Score=124, Evalue=3e-30,
Organism=Escherichia coli, GI1787116, Length=152, Percent_Identity=34.2105263157895, Blast_Score=103, Evalue=5e-24,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR013196
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg; PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 17422; Mature: 17422

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQLDKIDRGMLDMLQRDGRVSNARLAEAFSLSETSCWRRLRRLEEAGLIEGYHARLDRR
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
KLGLGVMAFVQIVCTQHSEEVTAEFERLIAASPNVLACDNTTGEADFLLQVVAADLDDYS
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHH
HFVEKVLRKLPGVLSIRSNLSLRQLKSTHRLPIV
HHHHHHHHHCCCHHHHHCCCHHHHHHHHCCCCCC
>Mature Secondary Structure
MEQLDKIDRGMLDMLQRDGRVSNARLAEAFSLSETSCWRRLRRLEEAGLIEGYHARLDRR
CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHH
KLGLGVMAFVQIVCTQHSEEVTAEFERLIAASPNVLACDNTTGEADFLLQVVAADLDDYS
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHH
HFVEKVLRKLPGVLSIRSNLSLRQLKSTHRLPIV
HHHHHHHHHCCCHHHHHCCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]